RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 PTGISQ16647 500 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 SPRED2Q7Z698 418 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 SIRT2Q8IXJ6 389 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 IFNL3Q8IZI9 196 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 CRBNQ96SW2 442 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 LRRCC1Q9C099 1032 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 CHMP4BQ9H444 224 aaKnown RBP13.42□□□□□ -0.26
CHMP6-202ENST00000571457 SUGCTQ9HAC7 445 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 ECHDC1Q9NTX5 307 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 PNMA2Q9UL42 364 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 STX8Q9UNK0 236 aa13.42□□□□□ -0.26
CHMP6-202ENST00000571457 COL4A4P53420 1690 aaPredicted RBP13.41□□□□□ -0.26
CHMP6-202ENST00000571457 ABHD14A-ACY1A0A1B0GW23 586 aa13.41□□□□□ -0.26
CHMP6-202ENST00000571457 PTPDC1A2A3K4 754 aa13.41□□□□□ -0.26
CHMP6-202ENST00000571457 GJB5O95377 273 aa13.41□□□□□ -0.26
CHMP6-202ENST00000571457 SELPP16109 830 aa13.41□□□□□ -0.26
CHMP6-202ENST00000571457 SNAP25P60880 206 aa13.41□□□□□ -0.26
CHMP6-202ENST00000571457 PTCRAQ6ISU1 281 aaPredicted RBP13.41□□□□□ -0.26
CHMP6-202ENST00000571457 CNKSR3Q6P9H4 555 aa13.41□□□□□ -0.26
CHMP6-202ENST00000571457 CHMP4CQ96CF2 233 aa13.41□□□□□ -0.26
CHMP6-202ENST00000571457 GPATCH3Q96I76 525 aa13.41□□□□□ -0.26
CHMP6-202ENST00000571457 PURBQ96QR8 312 aaKnown RBP13.41□□□□□ -0.26
CHMP6-202ENST00000571457 CTNNA3Q9UI47 895 aa13.41□□□□□ -0.26
CHMP6-202ENST00000571457 MTUS1Q9ULD2 1270 aa13.41□□□□□ -0.26
CHMP6-202ENST00000571457 DDX19BQ9UMR2 479 aa13.41□□□□□ -0.26
CHMP6-202ENST00000571457 FAM50BQ9Y247 325 aa13.41□□□□□ -0.26
CHMP6-202ENST00000571457 TRIP12Q14669 1992 aaPredicted RBP13.41□□□□□ -0.26
CHMP6-202ENST00000571457 TXNP10599 105 aaKnown RBP13.4□□□□□ -0.26
CHMP6-202ENST00000571457 CHMP4BP1P59074 171 aa13.4□□□□□ -0.26
CHMP6-202ENST00000571457 LRRC8DQ7L1W4 858 aa13.4□□□□□ -0.26
CHMP6-202ENST00000571457 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.4□□□□□ -0.26
CHMP6-202ENST00000571457 DCAF4Q8WV16 495 aa13.4□□□□□ -0.26
CHMP6-202ENST00000571457 NAPBQ9H115 298 aa13.4□□□□□ -0.26
CHMP6-202ENST00000571457 RANBP17Q9H2T7 1088 aaKnown RBP13.4□□□□□ -0.26
CHMP6-202ENST00000571457 ZBTB40Q9NUA8 1239 aa13.4□□□□□ -0.26
CHMP6-202ENST00000571457 LCTP09848 1927 aa13.4□□□□□ -0.26
CHMP6-202ENST00000571457 LINC01553A4QN01 128 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 GRXCR2A6NFK2 248 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 TSPY2A6NKD2 308 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 NFIBO00712 420 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 DCXO43602 365 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 CXCL10P02778 98 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 NHLH1Q02575 133 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 PPARAQ07869 468 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 IKBKEQ14164 716 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 PTPROQ16827 1216 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 CCDC96Q2M329 555 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 RNF207Q6ZRF8 634 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 SESTD1Q86VW0 696 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 DNERQ8NFT8 737 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 PPP1R13LQ8WUF5 828 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 WDFY4Q6ZS81 3184 aa13.39□□□□□ -0.27
CHMP6-202ENST00000571457 TRIOO75962 3097 aa13.38□□□□□ -0.27
CHMP6-202ENST00000571457 IL9P15248 144 aa13.38□□□□□ -0.27
CHMP6-202ENST00000571457 CALML3P27482 149 aa13.38□□□□□ -0.27
CHMP6-202ENST00000571457 DEFB103AP81534 67 aa13.38□□□□□ -0.27
CHMP6-202ENST00000571457 RBL2Q08999 1139 aa13.38□□□□□ -0.27
CHMP6-202ENST00000571457 BTNL9Q6UXG8 535 aa13.38□□□□□ -0.27
CHMP6-202ENST00000571457 TMCO2Q7Z6W1 182 aaPredicted RBP13.38□□□□□ -0.27
CHMP6-202ENST00000571457 FBXO22Q8NEZ5 403 aa13.38□□□□□ -0.27
CHMP6-202ENST00000571457 MTMR7Q9Y216 660 aa13.38□□□□□ -0.27
CHMP6-202ENST00000571457 INSL6Q9Y581 213 aa13.38□□□□□ -0.27
CHMP6-202ENST00000571457 PTPRSQ13332 1948 aa13.38□□□□□ -0.27
CHMP6-202ENST00000571457 ZNF318Q5VUA4 2279 aa13.38□□□□□ -0.27
CHMP6-202ENST00000571457 M0R2C6 588 aa13.37□□□□□ -0.27
CHMP6-202ENST00000571457 EDNRBP24530 442 aa13.37□□□□□ -0.27
CHMP6-202ENST00000571457 GPNMBQ14956 572 aa13.37□□□□□ -0.27
CHMP6-202ENST00000571457 TIGD5Q53EQ6 642 aa13.37□□□□□ -0.27
CHMP6-202ENST00000571457 SYDE2Q5VT97 1194 aa13.37□□□□□ -0.27
CHMP6-202ENST00000571457 SLC30A10Q6XR72 485 aa13.37□□□□□ -0.27
CHMP6-202ENST00000571457 NEK9Q8TD19 979 aa13.37□□□□□ -0.27
CHMP6-202ENST00000571457 COPS5Q92905 334 aa13.37□□□□□ -0.27
CHMP6-202ENST00000571457 MRPL38Q96DV4 380 aaKnown RBP13.37□□□□□ -0.27
CHMP6-202ENST00000571457 FBXL18Q96ME1 805 aa13.37□□□□□ -0.27
CHMP6-202ENST00000571457 UPF3BQ9BZI7 483 aaKnown RBP13.37□□□□□ -0.27
CHMP6-202ENST00000571457 PRKAG3Q9UGI9 489 aa13.37□□□□□ -0.27
CHMP6-202ENST00000571457 ZDBF2Q9HCK1 2354 aa13.37□□□□□ -0.27
CHMP6-202ENST00000571457 SIP14410 1827 aa13.36□□□□□ -0.27
CHMP6-202ENST00000571457 POTEB3A0JP26 581 aa13.36□□□□□ -0.27
CHMP6-202ENST00000571457 NBNO60934 754 aa13.36□□□□□ -0.27
CHMP6-202ENST00000571457 GH1P01241 217 aa13.36□□□□□ -0.27
CHMP6-202ENST00000571457 CKBP12277 381 aa13.36□□□□□ -0.27
CHMP6-202ENST00000571457 CASTP20810 708 aaKnown RBP13.36□□□□□ -0.27
CHMP6-202ENST00000571457 RPS6P62753 249 aaKnown RBP13.36□□□□□ -0.27
CHMP6-202ENST00000571457 GDF6Q6KF10 455 aaPredicted RBP13.36□□□□□ -0.27
CHMP6-202ENST00000571457 POTEBQ6S5H4 581 aa13.36□□□□□ -0.27
CHMP6-202ENST00000571457 C7orf31Q8N865 590 aa13.36□□□□□ -0.27
CHMP6-202ENST00000571457 SAMD11Q96NU1 681 aa13.36□□□□□ -0.27
CHMP6-202ENST00000571457 CTAGE1Q96RT6 745 aa13.36□□□□□ -0.27
CHMP6-202ENST00000571457 IL17RBQ9NRM6 502 aa13.36□□□□□ -0.27
CHMP6-202ENST00000571457 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.36□□□□□ -0.27
CHMP6-202ENST00000571457 SMARCA5O60264 1052 aaPredicted RBP13.35□□□□□ -0.27
CHMP6-202ENST00000571457 RANBP6O60518 1105 aaKnown RBP13.35□□□□□ -0.27
CHMP6-202ENST00000571457 NMT2O60551 498 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 AMHP03971 560 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 MMP3P08254 477 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 SLC16A2P36021 539 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 TTBK2Q6IQ55 1244 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 FAM117BQ6P1L5 589 aa13.35□□□□□ -0.27
CHMP6-202ENST00000571457 AFG1LQ8WV93 481 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms