RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 SLC5A4Q9NY91 659 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 DDX20Q9UHI6 824 aaKnown RBP8.07□□□□□ -1.12
SMG6-209ENST00000571442 ZHX1Q9UKY1 873 aaPredicted RBP8.07□□□□□ -1.12
SMG6-209ENST00000571442 OGDHLQ9ULD0 1010 aa8.07□□□□□ -1.12
SMG6-209ENST00000571442 DOCK5Q9H7D0 1870 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 CTAGE5O15320 804 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 SEPT4O43236 478 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 PRPF3O43395 683 aaKnown RBP8.06□□□□□ -1.12
SMG6-209ENST00000571442 JAK2O60674 1132 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 RGS20O76081 388 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 FDPSP14324 419 aaKnown RBP8.06□□□□□ -1.12
SMG6-209ENST00000571442 SMPD1P17405 629 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 CCDC144BQ3MJ40 725 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 FCHSD1Q86WN1 690 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 MCF2L2Q86YR7 1114 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 MSL3Q8N5Y2 521 aaKnown RBP8.06□□□□□ -1.12
SMG6-209ENST00000571442 COPS5Q92905 334 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 RMDN3Q96TC7 470 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 PDCD2LQ9BRP1 358 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 SLKQ9H2G2 1235 aaPredicted RBP8.06□□□□□ -1.12
SMG6-209ENST00000571442 TMEM260Q9NX78 707 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 VPS54Q9P1Q0 977 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 SEC63Q9UGP8 760 aaKnown RBP8.06□□□□□ -1.12
SMG6-209ENST00000571442 PNMA2Q9UL42 364 aa8.06□□□□□ -1.12
SMG6-209ENST00000571442 FRMPD4Q14CM0 1322 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 MYH7BA7E2Y1 1941 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 ASB14A6NK59 587 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 GCOM1H8Y6P7 765 aaPredicted RBP8.05□□□□□ -1.12
SMG6-209ENST00000571442 EDIL3O43854 480 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 ADAMTS4O75173 837 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 PGK1P00558 417 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 TFRCP02786 760 aaKnown RBP8.05□□□□□ -1.12
SMG6-209ENST00000571442 POLR2MP0CAP2 368 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 SCG2P13521 617 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 CLK2P49760 499 aaKnown RBP8.05□□□□□ -1.12
SMG6-209ENST00000571442 NAPAP54920 295 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 MRPS9P82933 396 aaKnown RBP8.05□□□□□ -1.12
SMG6-209ENST00000571442 PGM5Q15124 567 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 NPY5RQ15761 445 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 NSUN7Q8NE18 718 aaKnown RBP8.05□□□□□ -1.12
SMG6-209ENST00000571442 DNERQ8NFT8 737 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 RASGRP4Q8TDF6 673 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 GTF3C6Q969F1 213 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 RNF26Q9BY78 433 aaPredicted RBP8.05□□□□□ -1.12
SMG6-209ENST00000571442 ABHD16BQ9H3Z7 469 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 BCAS3Q9H6U6 928 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 BARHL2Q9NY43 387 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 NRBP1Q9UHY1 535 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 GNEQ9Y223 722 aaKnown RBP8.05□□□□□ -1.12
SMG6-209ENST00000571442 CNPY2Q9Y2B0 182 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 TELO2Q9Y4R8 837 aa8.05□□□□□ -1.12
SMG6-209ENST00000571442 SYNRGQ9UMZ2 1314 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 CCDC196A0A1B0GTZ2 297 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 RBM47A0AV96 593 aaKnown RBP8.04□□□□□ -1.12
SMG6-209ENST00000571442 SMCO2A6NFE2 343 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 RBAK-RBAKDNI3L0D1 243 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 PIK3CDO00329 1044 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 EIF5BO60841 1220 aaKnown RBP8.04□□□□□ -1.12
SMG6-209ENST00000571442 FARP2O94887 1054 aaPredicted RBP8.04□□□□□ -1.12
SMG6-209ENST00000571442 NR3C2P08235 984 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 COL6A1P12109 1028 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 MYCLP12524 364 aaPredicted RBP8.04□□□□□ -1.12
SMG6-209ENST00000571442 AKR1A1P14550 325 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 SEMA3FQ13275 785 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 PPP2R5BQ15173 497 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 LRRC41Q15345 812 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 ARHGEF16Q5VV41 709 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 CCSAPQ6IQ19 270 aaPredicted RBP8.04□□□□□ -1.12
SMG6-209ENST00000571442 CCDC83Q8IWF9 413 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 NSUN6Q8TEA1 469 aaKnown RBP8.04□□□□□ -1.12
SMG6-209ENST00000571442 PAWRQ96IZ0 340 aaKnown RBP8.04□□□□□ -1.12
SMG6-209ENST00000571442 PSTPIP2Q9H939 334 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 RIC8AQ9NPQ8 531 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 ADD3Q9UEY8 706 aaKnown RBP8.04□□□□□ -1.12
SMG6-209ENST00000571442 FAM184BQ9ULE4 1060 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 PCDHA6Q9UN73 950 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 PCDHA8Q9Y5H6 950 aa8.04□□□□□ -1.12
SMG6-209ENST00000571442 SORBS3O60504 671 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 DUSP11O75319 330 aaKnown RBP8.03□□□□□ -1.12
SMG6-209ENST00000571442 FOSBP53539 338 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 BEX3Q00994 111 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 SP2Q02086 613 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 TNFAIP2Q03169 654 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 PDE4DQ08499 809 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 SSRP1Q08945 709 aaKnown RBP8.03□□□□□ -1.12
SMG6-209ENST00000571442 RABEP1Q15276 862 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 ANKRD1Q15327 319 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 LY6KQ17RY6 165 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 HABP4Q5JVS0 413 aaKnown RBP8.03□□□□□ -1.12
SMG6-209ENST00000571442 JAKMIP3Q5VZ66 844 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 PPP1R18Q6NYC8 613 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 CCDC62Q6P9F0 684 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 SEPT14Q6ZU15 432 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 VSIG10LQ86VR7 867 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 KLHDC9Q8NEP7 349 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 SMARCC2Q8TAQ2 1214 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 MAF1Q9H063 256 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 ZMYND12Q9H0C1 365 aa8.03□□□□□ -1.12
SMG6-209ENST00000571442 UPF3AQ9H1J1 476 aaKnown RBP8.03□□□□□ -1.12
SMG6-209ENST00000571442 VTA1Q9NP79 307 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms