RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 ENAHQ8N8S7 591 aaPredicted RBP20.56■□□□□ 0.88
CIITA-206ENST00000571190 SYTL5Q8TDW5 730 aaPredicted RBP20.56■□□□□ 0.88
CIITA-206ENST00000571190 TAAR1Q96RJ0 339 aa20.56■□□□□ 0.88
CIITA-206ENST00000571190 ZSCAN10Q96SZ4 725 aaPredicted RBP20.56■□□□□ 0.88
CIITA-206ENST00000571190 DSCC1Q9BVC3 393 aa20.56■□□□□ 0.88
CIITA-206ENST00000571190 MTIF3Q9H2K0 278 aaKnown RBP20.56■□□□□ 0.88
CIITA-206ENST00000571190 VCANP13611 3396 aa20.55■□□□□ 0.88
CIITA-206ENST00000571190 NT5C2P49902 561 aa20.55■□□□□ 0.88
CIITA-206ENST00000571190 RABGGTBP53611 331 aa20.55■□□□□ 0.88
CIITA-206ENST00000571190 TTLL4Q14679 1199 aa20.55■□□□□ 0.88
CIITA-206ENST00000571190 IQCA1Q86XH1 822 aa20.55■□□□□ 0.88
CIITA-206ENST00000571190 GAS2L1Q99501 681 aaPredicted RBP20.55■□□□□ 0.88
CIITA-206ENST00000571190 KAT14Q9H8E8 782 aa20.55■□□□□ 0.88
CIITA-206ENST00000571190 GPHNQ9NQX3 736 aaPredicted RBP20.55■□□□□ 0.88
CIITA-206ENST00000571190 DIAPH3Q9NSV4 1193 aa20.55■□□□□ 0.88
CIITA-206ENST00000571190 MYOGP15173 224 aa20.54■□□□□ 0.88
CIITA-206ENST00000571190 QRICH1Q2TAL8 776 aa20.54■□□□□ 0.88
CIITA-206ENST00000571190 CCDC178Q5BJE1 867 aa20.54■□□□□ 0.88
CIITA-206ENST00000571190 NFRKBQ6P4R8 1299 aa20.54■□□□□ 0.88
CIITA-206ENST00000571190 JMJD4Q9H9V9 463 aa20.54■□□□□ 0.88
CIITA-206ENST00000571190 SLC4A7Q9Y6M7 1214 aa20.54■□□□□ 0.88
CIITA-206ENST00000571190 ABCB11O95342 1321 aa20.53■□□□□ 0.88
CIITA-206ENST00000571190 KPNA6O60684 536 aa20.53■□□□□ 0.88
CIITA-206ENST00000571190 ASPRV1Q53RT3 343 aa20.53■□□□□ 0.88
CIITA-206ENST00000571190 FAM47CQ5HY64 1035 aa20.53■□□□□ 0.88
CIITA-206ENST00000571190 CTAGE1Q96RT6 745 aa20.53■□□□□ 0.88
CIITA-206ENST00000571190 MPHOSPH6Q99547 160 aaKnown RBP20.53■□□□□ 0.88
CIITA-206ENST00000571190 MAF1Q9H063 256 aa20.53■□□□□ 0.88
CIITA-206ENST00000571190 SLC28A3Q9HAS3 691 aa20.53■□□□□ 0.88
CIITA-206ENST00000571190 PRUNE2Q8WUY3 3088 aa20.53■□□□□ 0.88
CIITA-206ENST00000571190 ARHGAP1Q07960 439 aa20.52■□□□□ 0.88
CIITA-206ENST00000571190 LY6KQ17RY6 165 aa20.52■□□□□ 0.88
CIITA-206ENST00000571190 BRDTQ58F21 947 aaPredicted RBP20.52■□□□□ 0.88
CIITA-206ENST00000571190 DEFB128Q7Z7B8 93 aa20.52■□□□□ 0.88
CIITA-206ENST00000571190 STAG2Q8N3U4 1231 aa20.52■□□□□ 0.88
CIITA-206ENST00000571190 AFG1LQ8WV93 481 aa20.52■□□□□ 0.88
CIITA-206ENST00000571190 PPM1EQ8WY54 764 aa20.52■□□□□ 0.88
CIITA-206ENST00000571190 SPTBN5Q9NRC6 3674 aaKnown RBP20.52■□□□□ 0.88
CIITA-206ENST00000571190 RAD50Q92878 1312 aa20.52■□□□□ 0.87
CIITA-206ENST00000571190 ZBBXA8MT70 800 aa20.51■□□□□ 0.87
CIITA-206ENST00000571190 B4DLN1 442 aa20.51■□□□□ 0.87
CIITA-206ENST00000571190 HIP1O00291 1037 aa20.51■□□□□ 0.87
CIITA-206ENST00000571190 OPLAHO14841 1288 aa20.51■□□□□ 0.87
CIITA-206ENST00000571190 PFKMP08237 780 aa20.51■□□□□ 0.87
CIITA-206ENST00000571190 IQCF3P0C7M6 154 aa20.51■□□□□ 0.87
CIITA-206ENST00000571190 MRPL12P52815 198 aaKnown RBP20.51■□□□□ 0.87
CIITA-206ENST00000571190 PTPN11Q06124 597 aaPredicted RBP20.51■□□□□ 0.87
CIITA-206ENST00000571190 IMMTQ16891 758 aaKnown RBP20.51■□□□□ 0.87
CIITA-206ENST00000571190 TJAP1Q5JTD0 557 aa20.51■□□□□ 0.87
CIITA-206ENST00000571190 SEPT14Q6ZU15 432 aa20.51■□□□□ 0.87
CIITA-206ENST00000571190 NSUN6Q8TEA1 469 aaKnown RBP20.51■□□□□ 0.87
CIITA-206ENST00000571190 KAT2BQ92831 832 aa20.51■□□□□ 0.87
CIITA-206ENST00000571190 YTHDC1Q96MU7 727 aaKnown RBP20.51■□□□□ 0.87
CIITA-206ENST00000571190 VAT1LQ9HCJ6 419 aa20.51■□□□□ 0.87
CIITA-206ENST00000571190 PCDHA11Q9Y5I1 949 aa20.51■□□□□ 0.87
CIITA-206ENST00000571190 MMP3P08254 477 aa20.5■□□□□ 0.87
CIITA-206ENST00000571190 PARP1P09874 1014 aaKnown RBP20.5■□□□□ 0.87
CIITA-206ENST00000571190 ATP2A2P16615 1042 aaKnown RBP20.5■□□□□ 0.87
CIITA-206ENST00000571190 SEC23AQ15436 765 aa20.5■□□□□ 0.87
CIITA-206ENST00000571190 FBXO11Q86XK2 927 aa20.5■□□□□ 0.87
CIITA-206ENST00000571190 MCF2L2Q86YR7 1114 aa20.5■□□□□ 0.87
CIITA-206ENST00000571190 SYMPKQ92797 1274 aaKnown RBP20.5■□□□□ 0.87
CIITA-206ENST00000571190 RMDN3Q96TC7 470 aa20.5■□□□□ 0.87
CIITA-206ENST00000571190 PITPNM1O00562 1244 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 PPP1R11O60927 126 aaPredicted RBP20.49■□□□□ 0.87
CIITA-206ENST00000571190 GH1P01241 217 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 IGFBP4P22692 258 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 PDE4AP27815 886 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 GPNMBQ14956 572 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 STXBP2Q15833 593 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 CCDC85BQ15834 202 aaPredicted RBP20.49■□□□□ 0.87
CIITA-206ENST00000571190 SLC35G1Q2M3R5 365 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 CYB5R4Q7L1T6 521 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 MTMR8Q96EF0 704 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 IWS1Q96ST2 819 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 KRT23Q9C075 422 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 CTNNA3Q9UI47 895 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 MRPL11Q9Y3B7 192 aaKnown RBP20.49■□□□□ 0.87
CIITA-206ENST00000571190 CHD9Q3L8U1 2897 aa20.49■□□□□ 0.87
CIITA-206ENST00000571190 GSPT1P15170 499 aaKnown RBP20.48■□□□□ 0.87
CIITA-206ENST00000571190 RFC2P35250 354 aa20.48■□□□□ 0.87
CIITA-206ENST00000571190 PPP2R2DQ66LE6 453 aa20.48■□□□□ 0.87
CIITA-206ENST00000571190 DDX41Q9UJV9 622 aaKnown RBP20.48■□□□□ 0.87
CIITA-206ENST00000571190 RBAK-RBAKDNI3L0D1 243 aa20.47■□□□□ 0.87
CIITA-206ENST00000571190 DHX16O60231 1041 aaKnown RBP20.47■□□□□ 0.87
CIITA-206ENST00000571190 ARHGEF15O94989 841 aa20.47■□□□□ 0.87
CIITA-206ENST00000571190 NR3C2P08235 984 aa20.47■□□□□ 0.87
CIITA-206ENST00000571190 EIF2AK2P19525 551 aaKnown RBP20.47■□□□□ 0.87
CIITA-206ENST00000571190 HSD17B4P51659 736 aa20.47■□□□□ 0.87
CIITA-206ENST00000571190 CHMP4BP1P59074 171 aa20.47■□□□□ 0.87
CIITA-206ENST00000571190 GHRHRQ02643 423 aa20.47■□□□□ 0.87
CIITA-206ENST00000571190 GDF6Q6KF10 455 aaPredicted RBP20.47■□□□□ 0.87
CIITA-206ENST00000571190 CHST3Q7LGC8 479 aa20.47■□□□□ 0.87
CIITA-206ENST00000571190 SESTD1Q86VW0 696 aa20.47■□□□□ 0.87
CIITA-206ENST00000571190 RETREG2Q8NC44 543 aa20.47■□□□□ 0.87
CIITA-206ENST00000571190 DHX38Q92620 1227 aaKnown RBP20.47■□□□□ 0.87
CIITA-206ENST00000571190 UBAC1Q9BSL1 405 aa20.47■□□□□ 0.87
CIITA-206ENST00000571190 CNNM2Q9H8M5 875 aa20.47■□□□□ 0.87
CIITA-206ENST00000571190 PXMP2Q9NR77 195 aa20.47■□□□□ 0.87
CIITA-206ENST00000571190 MAD2L2Q9UI95 211 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms