RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 KIAA1211Q6ZU35 1233 aa14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 RALYLQ86SE5 291 aaKnown RBP14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 ADGRF4Q8IZF3 695 aa14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 TOX2Q96NM4 488 aa14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 PDGFCQ9NRA1 345 aa14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 GNEQ9Y223 722 aaKnown RBP14.43□□□□□ -0.1
CTDNEP1-205ENST00000570828 ABCB11O95342 1321 aa14.42□□□□□ -0.1
CTDNEP1-205ENST00000570828 ERICH2A1L162 156 aa14.42□□□□□ -0.1
CTDNEP1-205ENST00000570828 KIAA0355O15063 1070 aa14.42□□□□□ -0.1
CTDNEP1-205ENST00000570828 CTAGE5O15320 804 aa14.42□□□□□ -0.1
CTDNEP1-205ENST00000570828 DYNC1LI2O43237 492 aaPredicted RBP14.42□□□□□ -0.1
CTDNEP1-205ENST00000570828 ZEB2O60315 1214 aa14.42□□□□□ -0.1
CTDNEP1-205ENST00000570828 CABYRO75952 493 aa14.42□□□□□ -0.1
CTDNEP1-205ENST00000570828 CYP21A2P08686 494 aa14.42□□□□□ -0.1
CTDNEP1-205ENST00000570828 PDE4DQ08499 809 aa14.42□□□□□ -0.1
CTDNEP1-205ENST00000570828 CYB5R4Q7L1T6 521 aa14.42□□□□□ -0.1
CTDNEP1-205ENST00000570828 DNERQ8NFT8 737 aa14.42□□□□□ -0.1
CTDNEP1-205ENST00000570828 SMCHD1A6NHR9 2005 aa14.42□□□□□ -0.1
CTDNEP1-205ENST00000570828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 B4DLN1 442 aa14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 ARVCFO00192 962 aa14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 MRPL12P52815 198 aaKnown RBP14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 LSM11P83369 360 aaKnown RBP eCLIP14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 FAAP100Q0VG06 881 aa14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 SART3Q15020 963 aaKnown RBP14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 SEC23AQ15436 765 aa14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 QRICH1Q2TAL8 776 aa14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 CXCL17Q6UXB2 119 aa14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 DEFB123Q8N688 67 aa14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 RGS22Q8NE09 1264 aa14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 ZFP91Q96JP5 570 aaPredicted RBP14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 MAF1Q9H063 256 aa14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 Q9Y3F1 56 aa14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 LTBP2Q14767 1821 aa14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 LRRC37A2A6NM11 1700 aa14.41□□□□□ -0.1
CTDNEP1-205ENST00000570828 IFIT3O14879 490 aaKnown RBP14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 TLR3O15455 904 aaKnown RBP14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 PTGS1P23219 599 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 EDNRBP24530 442 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 ITGB8P26012 769 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 FPGSQ05932 587 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 SHHQ15465 462 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 DUSP28Q4G0W2 176 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 FBXO11Q86XK2 927 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 MCF2L2Q86YR7 1114 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 NCOA7Q8NI08 942 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 WDR11Q9BZH6 1224 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 JMJD4Q9H9V9 463 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 VAT1LQ9HCJ6 419 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 MRPL11Q9Y3B7 192 aaKnown RBP14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 MCM3APO60318 1980 aa14.4□□□□□ -0.1
CTDNEP1-205ENST00000570828 KLRF2D3W0D1 207 aa14.39□□□□□ -0.11
CTDNEP1-205ENST00000570828 E7EWF7 191 aa14.39□□□□□ -0.11
CTDNEP1-205ENST00000570828 CDK7P50613 346 aa14.39□□□□□ -0.11
CTDNEP1-205ENST00000570828 WTAPQ15007 396 aa14.39□□□□□ -0.11
CTDNEP1-205ENST00000570828 PPP2R5BQ15173 497 aa14.39□□□□□ -0.11
CTDNEP1-205ENST00000570828 C9orf50Q5SZB4 431 aa14.39□□□□□ -0.11
CTDNEP1-205ENST00000570828 Q7L0L9 218 aa14.39□□□□□ -0.11
CTDNEP1-205ENST00000570828 STAG2Q8N3U4 1231 aa14.39□□□□□ -0.11
CTDNEP1-205ENST00000570828 SCFD2Q8WU76 684 aa14.39□□□□□ -0.11
CTDNEP1-205ENST00000570828 RNF25Q96BH1 459 aaPredicted RBP14.39□□□□□ -0.11
CTDNEP1-205ENST00000570828 TBX21Q9UL17 535 aa14.39□□□□□ -0.11
CTDNEP1-205ENST00000570828 RBM8AQ9Y5S9 174 aaKnown RBP14.39□□□□□ -0.11
CTDNEP1-205ENST00000570828 RBM47A0AV96 593 aaKnown RBP14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 NKRFO15226 690 aaKnown RBP eCLIP14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 CPT1AP50416 773 aa14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 ITGA7Q13683 1181 aa14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 BRDTQ58F21 947 aaPredicted RBP14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 TMEM67Q5HYA8 995 aa14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 TMEM63BQ5T3F8 832 aa14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 FAM126BQ8IXS8 530 aa14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 OR6J1Q8NGC5 347 aa14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 SYTL5Q8TDW5 730 aaPredicted RBP14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 MAP4K1Q92918 833 aa14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 KHSRPQ92945 711 aaKnown RBP eCLIP14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 RNPC3Q96LT9 517 aaKnown RBP14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 AMNQ9BXJ7 453 aa14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 SEZ6LQ9BYH1 1024 aa14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 MAD2L2Q9UI95 211 aa14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 TAF6LQ9Y6J9 622 aa14.38□□□□□ -0.11
CTDNEP1-205ENST00000570828 ZBTB5O15062 677 aa14.37□□□□□ -0.11
CTDNEP1-205ENST00000570828 TIMP1P01033 207 aa14.37□□□□□ -0.11
CTDNEP1-205ENST00000570828 TTLL4Q14679 1199 aa14.37□□□□□ -0.11
CTDNEP1-205ENST00000570828 GRM4Q14833 912 aa14.37□□□□□ -0.11
CTDNEP1-205ENST00000570828 STOX1Q6ZVD7 989 aa14.37□□□□□ -0.11
CTDNEP1-205ENST00000570828 CENPQQ7L2Z9 268 aaPredicted RBP14.37□□□□□ -0.11
CTDNEP1-205ENST00000570828 NSUN6Q8TEA1 469 aaKnown RBP14.37□□□□□ -0.11
CTDNEP1-205ENST00000570828 RMDN3Q96TC7 470 aa14.37□□□□□ -0.11
CTDNEP1-205ENST00000570828 POLR3EQ9NVU0 708 aa14.37□□□□□ -0.11
CTDNEP1-205ENST00000570828 LCTP09848 1927 aa14.37□□□□□ -0.11
CTDNEP1-205ENST00000570828 PALM3A6NDB9 673 aaPredicted RBP14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 CFBP00751 764 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 PSMC6P62333 389 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 TRAF1Q13077 416 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 ARHGEF16Q5VV41 709 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 MFSD5Q6N075 450 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 CHST3Q7LGC8 479 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 CATIPQ7Z7H3 387 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 HOMER1Q86YM7 354 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 SLC43A3Q8NBI5 491 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms