RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 CCDC155Q8N6L0 562 aa24.7■■□□□ 1.54
PKD1-240ENST00000570253 CLEC4DQ8WXI8 215 aa24.7■■□□□ 1.54
PKD1-240ENST00000570253 ADGRE1Q14246 886 aa24.69■■□□□ 1.54
PKD1-240ENST00000570253 NBPF20Q3BBV1 942 aa24.69■■□□□ 1.54
PKD1-240ENST00000570253 USH1GQ495M9 461 aa24.69■■□□□ 1.54
PKD1-240ENST00000570253 IQCA1Q86XH1 822 aa24.69■■□□□ 1.54
PKD1-240ENST00000570253 MICALL1Q8N3F8 863 aa24.69■■□□□ 1.54
PKD1-240ENST00000570253 SLC9A7Q96T83 725 aa24.69■■□□□ 1.54
PKD1-240ENST00000570253 FTOQ9C0B1 505 aaKnown RBP eCLIP24.69■■□□□ 1.54
PKD1-240ENST00000570253 MAF1Q9H063 256 aa24.69■■□□□ 1.54
PKD1-240ENST00000570253 KIF28PB7ZC32 967 aa24.68■■□□□ 1.54
PKD1-240ENST00000570253 PITPNM1O00562 1244 aa24.68■■□□□ 1.54
PKD1-240ENST00000570253 ZNF213O14771 459 aa24.68■■□□□ 1.54
PKD1-240ENST00000570253 GTPBP6O43824 516 aaPredicted RBP24.68■■□□□ 1.54
PKD1-240ENST00000570253 HDAC1Q13547 482 aaPredicted RBP24.68■■□□□ 1.54
PKD1-240ENST00000570253 RGS22Q8NE09 1264 aa24.68■■□□□ 1.54
PKD1-240ENST00000570253 SPTBN5Q9NRC6 3674 aaKnown RBP24.67■■□□□ 1.54
PKD1-240ENST00000570253 A6NJR5 290 aa24.67■■□□□ 1.54
PKD1-240ENST00000570253 SNHG28P0DPA3 235 aa24.67■■□□□ 1.54
PKD1-240ENST00000570253 EDNRBP24530 442 aa24.67■■□□□ 1.54
PKD1-240ENST00000570253 CHMP4BP1P59074 171 aa24.67■■□□□ 1.54
PKD1-240ENST00000570253 AAK1Q2M2I8 961 aa24.67■■□□□ 1.54
PKD1-240ENST00000570253 ZNF589Q86UQ0 364 aaPredicted RBP24.67■■□□□ 1.54
PKD1-240ENST00000570253 DGKHQ86XP1 1220 aa24.67■■□□□ 1.54
PKD1-240ENST00000570253 KAT14Q9H8E8 782 aa24.67■■□□□ 1.54
PKD1-240ENST00000570253 SCN10AQ9Y5Y9 1956 aa24.66■■□□□ 1.54
PKD1-240ENST00000570253 SKIV2LQ15477 1246 aaKnown RBP24.66■■□□□ 1.54
PKD1-240ENST00000570253 MCF2L2Q86YR7 1114 aa24.66■■□□□ 1.54
PKD1-240ENST00000570253 PHOSPHO2Q8TCD6 241 aa24.66■■□□□ 1.54
PKD1-240ENST00000570253 ADAMTS19Q8TE59 1207 aa24.66■■□□□ 1.54
PKD1-240ENST00000570253 CRBNQ96SW2 442 aa24.66■■□□□ 1.54
PKD1-240ENST00000570253 ABCB11O95342 1321 aa24.65■■□□□ 1.54
PKD1-240ENST00000570253 DHX16O60231 1041 aaKnown RBP24.65■■□□□ 1.54
PKD1-240ENST00000570253 UHRF1Q96T88 793 aaPredicted RBP24.65■■□□□ 1.54
PKD1-240ENST00000570253 GH1P01241 217 aa24.64■■□□□ 1.54
PKD1-240ENST00000570253 GOLGA8HP0CJ92 632 aa24.64■■□□□ 1.54
PKD1-240ENST00000570253 MYOGP15173 224 aa24.64■■□□□ 1.54
PKD1-240ENST00000570253 KCNJ6P48051 423 aa24.64■■□□□ 1.54
PKD1-240ENST00000570253 CDC37Q16543 378 aaPredicted RBP24.64■■□□□ 1.54
PKD1-240ENST00000570253 PNMA1Q8ND90 353 aa24.64■■□□□ 1.54
PKD1-240ENST00000570253 NSUN6Q8TEA1 469 aaKnown RBP24.64■■□□□ 1.54
PKD1-240ENST00000570253 COPS5Q92905 334 aa24.64■■□□□ 1.54
PKD1-240ENST00000570253 ZKSCAN3Q9BRR0 538 aa24.64■■□□□ 1.54
PKD1-240ENST00000570253 LNPKQ9C0E8 428 aa24.64■■□□□ 1.54
PKD1-240ENST00000570253 CHD9Q3L8U1 2897 aa24.64■■□□□ 1.53
PKD1-240ENST00000570253 BAIAP3O94812 1187 aa24.63■■□□□ 1.53
PKD1-240ENST00000570253 CA3P07451 260 aa24.63■■□□□ 1.53
PKD1-240ENST00000570253 IQCF3P0C7M6 154 aa24.63■■□□□ 1.53
PKD1-240ENST00000570253 AAMPQ13685 434 aa24.63■■□□□ 1.53
PKD1-240ENST00000570253 TBC1D10CQ8IV04 446 aa24.63■■□□□ 1.53
PKD1-240ENST00000570253 CAGE1Q8TC20 777 aa24.63■■□□□ 1.53
PKD1-240ENST00000570253 UBA5Q9GZZ9 404 aa24.63■■□□□ 1.53
PKD1-240ENST00000570253 DIAPH3Q9NSV4 1193 aa24.63■■□□□ 1.53
PKD1-240ENST00000570253 TANC1Q9C0D5 1861 aa24.63■■□□□ 1.53
PKD1-240ENST00000570253 HIP1O00291 1037 aa24.62■■□□□ 1.53
PKD1-240ENST00000570253 CASTP20810 708 aaKnown RBP24.62■■□□□ 1.53
PKD1-240ENST00000570253 STXBP2Q15833 593 aa24.62■■□□□ 1.53
PKD1-240ENST00000570253 PTGISQ16647 500 aa24.62■■□□□ 1.53
PKD1-240ENST00000570253 ASPRV1Q53RT3 343 aa24.62■■□□□ 1.53
PKD1-240ENST00000570253 SEPT14Q6ZU15 432 aa24.62■■□□□ 1.53
PKD1-240ENST00000570253 IWS1Q96ST2 819 aa24.62■■□□□ 1.53
PKD1-240ENST00000570253 MRPL11Q9Y3B7 192 aaKnown RBP24.62■■□□□ 1.53
PKD1-240ENST00000570253 SCN5AQ14524 2016 aa24.62■■□□□ 1.53
PKD1-240ENST00000570253 NEDD4P46934 1319 aa24.61■■□□□ 1.53
PKD1-240ENST00000570253 PARNO95453 639 aaKnown RBP24.61■■□□□ 1.53
PKD1-240ENST00000570253 SDSP20132 328 aa24.61■■□□□ 1.53
PKD1-240ENST00000570253 AFAP1L1Q8TED9 768 aa24.61■■□□□ 1.53
PKD1-240ENST00000570253 RWDD1Q9H446 243 aaPredicted RBP24.61■■□□□ 1.53
PKD1-240ENST00000570253 KDM4AO75164 1064 aa24.6■■□□□ 1.53
PKD1-240ENST00000570253 ARHGEF16Q5VV41 709 aa24.6■■□□□ 1.53
PKD1-240ENST00000570253 FBXO11Q86XK2 927 aa24.6■■□□□ 1.53
PKD1-240ENST00000570253 RMDN3Q96TC7 470 aa24.6■■□□□ 1.53
PKD1-240ENST00000570253 KATNAL1Q9BW62 490 aa24.6■■□□□ 1.53
PKD1-240ENST00000570253 MMP3P08254 477 aa24.59■■□□□ 1.53
PKD1-240ENST00000570253 PARP1P09874 1014 aaKnown RBP24.59■■□□□ 1.53
PKD1-240ENST00000570253 DGKDQ16760 1214 aa24.59■■□□□ 1.53
PKD1-240ENST00000570253 IMMTQ16891 758 aaKnown RBP24.59■■□□□ 1.53
PKD1-240ENST00000570253 CHST3Q7LGC8 479 aa24.59■■□□□ 1.53
PKD1-240ENST00000570253 HERC6Q8IVU3 1022 aa24.59■■□□□ 1.53
PKD1-240ENST00000570253 ADGRF4Q8IZF3 695 aa24.59■■□□□ 1.53
PKD1-240ENST00000570253 AFG1LQ8WV93 481 aa24.59■■□□□ 1.53
PKD1-240ENST00000570253 ZSCAN10Q96SZ4 725 aaPredicted RBP24.59■■□□□ 1.53
PKD1-240ENST00000570253 CTNNA3Q9UI47 895 aa24.59■■□□□ 1.53
PKD1-240ENST00000570253 MYH6P13533 1939 aa24.59■■□□□ 1.53
PKD1-240ENST00000570253 ARIH2O95376 493 aa24.58■■□□□ 1.53
PKD1-240ENST00000570253 CWC27Q6UX04 472 aaKnown RBP24.58■■□□□ 1.53
PKD1-240ENST00000570253 C7orf31Q8N865 590 aa24.58■■□□□ 1.53
PKD1-240ENST00000570253 SYTL5Q8TDW5 730 aaPredicted RBP24.58■■□□□ 1.53
PKD1-240ENST00000570253 PPP1R13LQ8WUF5 828 aa24.58■■□□□ 1.53
PKD1-240ENST00000570253 VWCEQ96DN2 955 aa24.58■■□□□ 1.53
PKD1-240ENST00000570253 UBAC1Q9BSL1 405 aa24.58■■□□□ 1.53
PKD1-240ENST00000570253 KRT23Q9C075 422 aa24.58■■□□□ 1.53
PKD1-240ENST00000570253 CNNM2Q9H8M5 875 aa24.58■■□□□ 1.53
PKD1-240ENST00000570253 LAMA4Q16363 1823 aa24.58■■□□□ 1.53
PKD1-240ENST00000570253 TLL1O43897 1013 aa24.57■■□□□ 1.52
PKD1-240ENST00000570253 COL9A1P20849 921 aa24.57■■□□□ 1.52
PKD1-240ENST00000570253 LY6KQ17RY6 165 aa24.57■■□□□ 1.52
PKD1-240ENST00000570253 B4GALNT3Q6L9W6 998 aa24.57■■□□□ 1.52
PKD1-240ENST00000570253 CCDC62Q6P9F0 684 aa24.57■■□□□ 1.52
PKD1-240ENST00000570253 SESTD1Q86VW0 696 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms