RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CRKP46108 304 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 HHIPL2Q6UWX4 724 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 SAMD7Q7Z3H4 446 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 APPL2Q8NEU8 664 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 RHPN1Q8TCX5 695 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 NUP133Q8WUM0 1156 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 BHMTQ93088 406 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 ENAMQ9NRM1 1142 aa7.44□□□□□ -1.22
SMG1-217ENST00000569764 CLRN2A0PK11 232 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 GTPBP10A4D1E9 387 aaKnown RBP7.43□□□□□ -1.22
SMG1-217ENST00000569764 AKR1B10O60218 316 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 NCBP1Q09161 790 aaKnown RBP7.43□□□□□ -1.22
SMG1-217ENST00000569764 ERAP2Q6P179 960 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 SRLQ86TD4 932 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 GLT8D2Q9H1C3 349 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 UNC45AQ9H3U1 944 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 NEUROD4Q9HD90 331 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 FANCFQ9NPI8 374 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 PALD1Q9ULE6 856 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 FARP1Q9Y4F1 1045 aaPredicted RBP7.43□□□□□ -1.22
SMG1-217ENST00000569764 ESPNB1AK53 854 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 GPR25O00155 361 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 MX1P20591 662 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 UBASH3AP57075 661 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 MDM2Q00987 491 aaPredicted RBP7.43□□□□□ -1.22
SMG1-217ENST00000569764 PPATQ06203 517 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 PTF1AQ7RTS3 328 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 RNF180Q86T96 592 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 SPAG5Q96R06 1193 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 SLX1AQ9BQ83 275 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 PAXBP1Q9Y5B6 917 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 MAGEB6P1A0A0J9YX57 407 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 CIAO1O76071 339 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 NTSR2O95665 410 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 DDIT3P35638 169 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 VEGFBP49765 207 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 BPIFB3P59826 476 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 ZSCAN26Q16670 478 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 OXER1Q8TDS5 423 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 SYMPKQ92797 1274 aaKnown RBP7.43□□□□□ -1.22
SMG1-217ENST00000569764 HPS3Q969F9 1004 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 RNF208Q9H0X6 261 aa7.43□□□□□ -1.22
SMG1-217ENST00000569764 OSBPL5Q9H0X9 879 aaPredicted RBP7.43□□□□□ -1.22
SMG1-217ENST00000569764 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMG1-217ENST00000569764 CCDC163A0A0D9SF12 145 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 USP17L15C9J2P7 530 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 USP17L13C9JLJ4 530 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 USP17L11C9JVI0 530 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 USP17L18D6R9N7 530 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 USP17L22D6RA61 530 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 USP17L17D6RBQ6 530 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 USP17L19D6RCP7 530 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 USP17L20D6RJB6 530 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 ORC4O43929 436 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 PRMT3O60678 531 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 CDC45O75419 566 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 RFX5P48382 616 aaPredicted RBP7.42□□□□□ -1.22
SMG1-217ENST00000569764 USP17L24Q0WX57 530 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 MTX1Q13505 466 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 TRIM68Q6AZZ1 485 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 OLFML1Q6UWY5 402 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 ZNF354CQ86Y25 554 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 CCDC65Q8IXS2 484 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 UCN2Q96RP3 112 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 STAP2Q9UGK3 403 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 NDUFB9Q9Y6M9 179 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 MYH14Q7Z406 1995 aaKnown RBP7.42□□□□□ -1.22
SMG1-217ENST00000569764 DOT1LQ8TEK3 1739 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 LILRB3O75022 631 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 FARP2O94887 1054 aaPredicted RBP7.42□□□□□ -1.22
SMG1-217ENST00000569764 SLC25A27O95847 323 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 VIL1P09327 827 aaKnown RBP7.42□□□□□ -1.22
SMG1-217ENST00000569764 RCAN1P53805 252 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 LMNB2Q03252 620 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 SFSWAPQ12872 951 aaKnown RBP7.42□□□□□ -1.22
SMG1-217ENST00000569764 C6orf118Q5T5N4 469 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 DAAM2Q86T65 1068 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 AACSQ86V21 672 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 METTL16Q86W50 562 aaKnown RBP7.42□□□□□ -1.22
SMG1-217ENST00000569764 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.42□□□□□ -1.22
SMG1-217ENST00000569764 TMX1Q9H3N1 280 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 RPAP3Q9H6T3 665 aaPredicted RBP7.42□□□□□ -1.22
SMG1-217ENST00000569764 SEC63Q9UGP8 760 aaKnown RBP7.42□□□□□ -1.22
SMG1-217ENST00000569764 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.42□□□□□ -1.22
SMG1-217ENST00000569764 MSRAQ9UJ68 235 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 CNTNAP1P78357 1384 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 PRPF3O43395 683 aaKnown RBP7.42□□□□□ -1.22
SMG1-217ENST00000569764 DTNBO60941 627 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 ZSCAN20P17040 1043 aaPredicted RBP7.42□□□□□ -1.22
SMG1-217ENST00000569764 PPIL2Q13356 520 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 TRIM14Q14142 442 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 DSTYKQ6XUX3 929 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 RSRC2Q7L4I2 434 aaKnown RBP7.42□□□□□ -1.22
SMG1-217ENST00000569764 GAS2L1Q99501 681 aaPredicted RBP7.42□□□□□ -1.22
SMG1-217ENST00000569764 MRIQ9BWK5 157 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 PLA2G12BQ9BX93 195 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 ELP3Q9H9T3 547 aa7.42□□□□□ -1.22
SMG1-217ENST00000569764 SPTLC2O15270 562 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 RAB27AP51159 221 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 PRPF38BQ5VTL8 546 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms