RNA–Protein interactions for RNA: ENST00000569607.1

IRF8-210, Transcript of interferon regulatory factor 8, humanhuman

TSL 3

Gene IRF8, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-210ENST00000569607 SMPD1P17405 629 aa19.27■□□□□ 0.68
IRF8-210ENST00000569607 SYN1P17600 705 aa19.27■□□□□ 0.68
IRF8-210ENST00000569607 SMARCA1P28370 1054 aa19.27■□□□□ 0.68
IRF8-210ENST00000569607 FUT2Q10981 343 aa19.27■□□□□ 0.68
IRF8-210ENST00000569607 GNASQ5JWF2 1037 aa19.27■□□□□ 0.68
IRF8-210ENST00000569607 NSUN6Q8TEA1 469 aaKnown RBP19.27■□□□□ 0.68
IRF8-210ENST00000569607 RMDN3Q96TC7 470 aa19.27■□□□□ 0.68
IRF8-210ENST00000569607 SPZ1Q9BXG8 430 aa19.27■□□□□ 0.68
IRF8-210ENST00000569607 AP5M1Q9H0R1 490 aa19.27■□□□□ 0.68
IRF8-210ENST00000569607 UPF3AQ9H1J1 476 aaKnown RBP19.27■□□□□ 0.68
IRF8-210ENST00000569607 ALDH8A1Q9H2A2 487 aaPredicted RBP19.27■□□□□ 0.68
IRF8-210ENST00000569607 ATP11BQ9Y2G3 1177 aa19.27■□□□□ 0.68
IRF8-210ENST00000569607 LCTP09848 1927 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 OPLAHO14841 1288 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 EDNRBP24530 442 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 PDIA3P30101 505 aaKnown RBP19.26■□□□□ 0.67
IRF8-210ENST00000569607 ACLYP53396 1101 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 RCAN1P53805 252 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 AK2P54819 239 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 RTP1P59025 263 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 RTN1Q16799 776 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 TMEM63BQ5T3F8 832 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 ARHGEF16Q5VV41 709 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 CHRDL2Q6WN34 429 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 CCDC82Q8N4S0 544 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 PCSK9Q8NBP7 692 aaKnown RBP19.26■□□□□ 0.67
IRF8-210ENST00000569607 NAP1L2Q9ULW6 460 aaPredicted RBP19.26■□□□□ 0.67
IRF8-210ENST00000569607 COLQQ9Y215 455 aaPredicted RBP19.26■□□□□ 0.67
IRF8-210ENST00000569607 GNEQ9Y223 722 aaKnown RBP19.26■□□□□ 0.67
IRF8-210ENST00000569607 MCM3APO60318 1980 aa19.26■□□□□ 0.67
IRF8-210ENST00000569607 A0A1W2PQ45 241 aaPredicted RBP19.25■□□□□ 0.67
IRF8-210ENST00000569607 A0A1W2PQY0 241 aa19.25■□□□□ 0.67
IRF8-210ENST00000569607 MOXD2PA6NHM9 499 aa19.25■□□□□ 0.67
IRF8-210ENST00000569607 ADD1P35611 737 aaKnown RBP19.25■□□□□ 0.67
IRF8-210ENST00000569607 HSD17B4P51659 736 aa19.25■□□□□ 0.67
IRF8-210ENST00000569607 NEK4P51957 841 aa19.25■□□□□ 0.67
IRF8-210ENST00000569607 BEX3Q00994 111 aa19.25■□□□□ 0.67
IRF8-210ENST00000569607 CCSAPQ6IQ19 270 aaPredicted RBP19.25■□□□□ 0.67
IRF8-210ENST00000569607 TLK2Q86UE8 772 aa19.25■□□□□ 0.67
IRF8-210ENST00000569607 SAMD3Q8N6K7 520 aa19.25■□□□□ 0.67
IRF8-210ENST00000569607 VTI1AQ96AJ9 217 aa19.25■□□□□ 0.67
IRF8-210ENST00000569607 TBC1D32Q96NH3 1257 aa19.25■□□□□ 0.67
IRF8-210ENST00000569607 WDR11Q9BZH6 1224 aa19.25■□□□□ 0.67
IRF8-210ENST00000569607 MAP3K20Q9NYL2 800 aaKnown RBP19.25■□□□□ 0.67
IRF8-210ENST00000569607 PCDH10Q9P2E7 1040 aa19.25■□□□□ 0.67
IRF8-210ENST00000569607 SEC63Q9UGP8 760 aaKnown RBP19.25■□□□□ 0.67
IRF8-210ENST00000569607 CNTNAP5Q8WYK1 1306 aa19.25■□□□□ 0.67
IRF8-210ENST00000569607 hCG_1642624A0A1W2PR95 340 aa19.24■□□□□ 0.67
IRF8-210ENST00000569607 GCOM1H8Y6P7 765 aaPredicted RBP19.24■□□□□ 0.67
IRF8-210ENST00000569607 ASGR1P07306 291 aa19.24■□□□□ 0.67
IRF8-210ENST00000569607 POLR2MP0CAP2 368 aa19.24■□□□□ 0.67
IRF8-210ENST00000569607 PTGS1P23219 599 aa19.24■□□□□ 0.67
IRF8-210ENST00000569607 CST5P28325 142 aaPredicted RBP19.24■□□□□ 0.67
IRF8-210ENST00000569607 HOXA13P31271 388 aaPredicted RBP19.24■□□□□ 0.67
IRF8-210ENST00000569607 METAP2P50579 478 aaKnown RBP eCLIP19.24■□□□□ 0.67
IRF8-210ENST00000569607 DUSP28Q4G0W2 176 aa19.24■□□□□ 0.67
IRF8-210ENST00000569607 IWS1Q96ST2 819 aa19.24■□□□□ 0.67
IRF8-210ENST00000569607 NCOA5Q9HCD5 579 aaKnown RBP19.24■□□□□ 0.67
IRF8-210ENST00000569607 STARD7Q9NQZ5 370 aa19.24■□□□□ 0.67
IRF8-210ENST00000569607 RBM28Q9NW13 759 aaKnown RBP19.24■□□□□ 0.67
IRF8-210ENST00000569607 TPCN1Q9ULQ1 816 aa19.24■□□□□ 0.67
IRF8-210ENST00000569607 Q9Y3F1 56 aa19.24■□□□□ 0.67
IRF8-210ENST00000569607 RBM47A0AV96 593 aaKnown RBP19.23■□□□□ 0.67
IRF8-210ENST00000569607 EIF2AK2P19525 551 aaKnown RBP19.23■□□□□ 0.67
IRF8-210ENST00000569607 GHRHRQ02643 423 aa19.23■□□□□ 0.67
IRF8-210ENST00000569607 STXBP2Q15833 593 aa19.23■□□□□ 0.67
IRF8-210ENST00000569607 TRIM60Q495X7 471 aa19.23■□□□□ 0.67
IRF8-210ENST00000569607 PXMP2Q9NR77 195 aa19.23■□□□□ 0.67
IRF8-210ENST00000569607 ALPK3Q96L96 1907 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 CTAGE5O15320 804 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 ZEB2O60315 1214 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 LARGE1O95461 756 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 NR3C2P08235 984 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 NKX3-2P78367 333 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 CCT2P78371 535 aaKnown RBP19.22■□□□□ 0.67
IRF8-210ENST00000569607 SNX17Q15036 470 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 NTRK3Q16288 839 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 FSCN1Q16658 493 aaKnown RBP19.22■□□□□ 0.67
IRF8-210ENST00000569607 SEPT14Q6ZU15 432 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 FCHSD1Q86WN1 690 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 SCFD2Q8WU76 684 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 ZNF274Q96GC6 653 aaPredicted RBP19.22■□□□□ 0.67
IRF8-210ENST00000569607 GLT1D1Q96MS3 346 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 PRKAG2Q9UGJ0 569 aa19.22■□□□□ 0.67
IRF8-210ENST00000569607 TXNP10599 105 aaKnown RBP19.21■□□□□ 0.67
IRF8-210ENST00000569607 TLE2Q04725 743 aa19.21■□□□□ 0.67
IRF8-210ENST00000569607 STK3Q13188 491 aa19.21■□□□□ 0.67
IRF8-210ENST00000569607 PPP2R5BQ15173 497 aa19.21■□□□□ 0.67
IRF8-210ENST00000569607 C1orf53Q5VUE5 145 aa19.21■□□□□ 0.67
IRF8-210ENST00000569607 UPF2Q9HAU5 1272 aaKnown RBP19.21■□□□□ 0.67
IRF8-210ENST00000569607 NKRFO15226 690 aaKnown RBP eCLIP19.2■□□□□ 0.66
IRF8-210ENST00000569607 PPFIA3O75145 1194 aa19.2■□□□□ 0.66
IRF8-210ENST00000569607 EIF3JO75822 258 aaKnown RBP19.2■□□□□ 0.66
IRF8-210ENST00000569607 MYCLP12524 364 aaPredicted RBP19.2■□□□□ 0.66
IRF8-210ENST00000569607 TTLL4Q14679 1199 aa19.2■□□□□ 0.66
IRF8-210ENST00000569607 OR6J1Q8NGC5 347 aa19.2■□□□□ 0.66
IRF8-210ENST00000569607 CUL5Q93034 780 aa19.2■□□□□ 0.66
IRF8-210ENST00000569607 PDCD2LQ9BRP1 358 aa19.2■□□□□ 0.66
IRF8-210ENST00000569607 RBM27Q9P2N5 1060 aaKnown RBP19.2■□□□□ 0.66
IRF8-210ENST00000569607 ELP1O95163 1332 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms