RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 FUT2Q10981 343 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 TRAF1Q13077 416 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 KCNA10Q16322 511 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 RTN1Q16799 776 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 IQSEC1Q6DN90 963 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 SYNE3Q6ZMZ3 975 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 TMTC3Q6ZXV5 915 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 HOMER1Q86YM7 354 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 FBXO16Q8IX29 292 aaPredicted RBP10.85□□□□□ -0.67
UBR1-210ENST00000569337 SRBD1Q8N5C6 995 aaKnown RBP10.85□□□□□ -0.67
UBR1-210ENST00000569337 KLHDC9Q8NEP7 349 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 DNERQ8NFT8 737 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 CTCFLQ8NI51 663 aaPredicted RBP10.85□□□□□ -0.67
UBR1-210ENST00000569337 MORC4Q8TE76 937 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 MAP3K14Q99558 947 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 SLKQ9H2G2 1235 aaPredicted RBP10.85□□□□□ -0.67
UBR1-210ENST00000569337 VTA1Q9NP79 307 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 PRKAG2Q9UGJ0 569 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 PHF24Q9UPV7 400 aa10.85□□□□□ -0.67
UBR1-210ENST00000569337 DDX49Q9Y6V7 483 aaKnown RBP10.85□□□□□ -0.67
UBR1-210ENST00000569337 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.84□□□□□ -0.67
UBR1-210ENST00000569337 A0A1W2PQ45 241 aaPredicted RBP10.84□□□□□ -0.67
UBR1-210ENST00000569337 A0A1W2PQY0 241 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 MOXD2PA6NHM9 499 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 K7ELQ4 463 aaPredicted RBP10.84□□□□□ -0.67
UBR1-210ENST00000569337 ADCY6O43306 1168 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 CYTH3O43739 400 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 CALM1P0DP23 149 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 CALM2P0DP24 149 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 CALM3P0DP25 149 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 KIF5BP33176 963 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 MCM2P49736 904 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 ACLYP53396 1101 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 GJA9P57773 515 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 GNASQ5JWF2 1037 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 TAPT1Q6NXT6 567 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 CCDC83Q8IWF9 413 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 PCSK9Q8NBP7 692 aaKnown RBP10.84□□□□□ -0.67
UBR1-210ENST00000569337 TBC1D5Q92609 795 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 VTI1AQ96AJ9 217 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 MTMR8Q96EF0 704 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 ZSCAN31Q96LW9 406 aaPredicted RBP10.84□□□□□ -0.67
UBR1-210ENST00000569337 PIGSQ96S52 555 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 AP5M1Q9H0R1 490 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 RIOX1Q9H6W3 641 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 PDGFCQ9NRA1 345 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 SH2B1Q9NRF2 756 aaPredicted RBP10.84□□□□□ -0.67
UBR1-210ENST00000569337 RBM27Q9P2N5 1060 aaKnown RBP10.84□□□□□ -0.67
UBR1-210ENST00000569337 PCDHA1Q9Y5I3 950 aa10.84□□□□□ -0.67
UBR1-210ENST00000569337 PNMA6FA0A0J9YX94 578 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 MYADML2A6NDP7 307 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 DYNC1LI2O43237 492 aaPredicted RBP10.83□□□□□ -0.68
UBR1-210ENST00000569337 CFBP00751 764 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 ASGR1P07306 291 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 SMPD1P17405 629 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 CST5P28325 142 aaPredicted RBP10.83□□□□□ -0.68
UBR1-210ENST00000569337 GNAQP50148 359 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 IRX5P78411 483 aaPredicted RBP10.83□□□□□ -0.68
UBR1-210ENST00000569337 CUL4AQ13619 759 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 TRIM60Q495X7 471 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 C1orf53Q5VUE5 145 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 CCSAPQ6IQ19 270 aaPredicted RBP10.83□□□□□ -0.68
UBR1-210ENST00000569337 TLK2Q86UE8 772 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 HSCBQ8IWL3 235 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 CCDC82Q8N4S0 544 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 SYTL5Q8TDW5 730 aaPredicted RBP10.83□□□□□ -0.68
UBR1-210ENST00000569337 GLT1D1Q96MS3 346 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 GDF15Q99988 308 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 WDR11Q9BZH6 1224 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 UPF3AQ9H1J1 476 aaKnown RBP10.83□□□□□ -0.68
UBR1-210ENST00000569337 STARD7Q9NQZ5 370 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 GNEQ9Y223 722 aaKnown RBP10.83□□□□□ -0.68
UBR1-210ENST00000569337 CNTNAP5Q8WYK1 1306 aa10.83□□□□□ -0.68
UBR1-210ENST00000569337 hCG_1642624A0A1W2PR95 340 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 ZEB2O60315 1214 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 JAK2O60674 1132 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 PPP1R11O60927 126 aaPredicted RBP10.82□□□□□ -0.68
UBR1-210ENST00000569337 FDPSP14324 419 aaKnown RBP10.82□□□□□ -0.68
UBR1-210ENST00000569337 EDNRBP24530 442 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 MAGEA10P43363 369 aaPredicted RBP10.82□□□□□ -0.68
UBR1-210ENST00000569337 BEX3Q00994 111 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 TLE2Q04725 743 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 SNX17Q15036 470 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 ARHGEF16Q5VV41 709 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 NSUN7Q8NE18 718 aaKnown RBP10.82□□□□□ -0.68
UBR1-210ENST00000569337 NSUN6Q8TEA1 469 aaKnown RBP10.82□□□□□ -0.68
UBR1-210ENST00000569337 PIBF1Q8WXW3 757 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 PHKBQ93100 1093 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 RRP36Q96EU6 259 aaKnown RBP10.82□□□□□ -0.68
UBR1-210ENST00000569337 TAAR1Q96RJ0 339 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 RMDN3Q96TC7 470 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 LBHD1Q9BQE6 289 aaPredicted RBP10.82□□□□□ -0.68
UBR1-210ENST00000569337 LZTS2Q9BRK4 669 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 PRO3102Q9H379 93 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 PRDM5Q9NQX1 630 aaPredicted RBP10.82□□□□□ -0.68
UBR1-210ENST00000569337 RBM28Q9NW13 759 aaKnown RBP10.82□□□□□ -0.68
UBR1-210ENST00000569337 MAP3K20Q9NYL2 800 aaKnown RBP10.82□□□□□ -0.68
UBR1-210ENST00000569337 Q9Y3F1 56 aa10.82□□□□□ -0.68
UBR1-210ENST00000569337 ZNFX1Q9P2E3 1918 aaKnown RBP10.82□□□□□ -0.68
UBR1-210ENST00000569337 ELP1O95163 1332 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms