RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 MUM1L1Q5H9M0 696 aa18.39■□□□□ 0.53
USB1-215ENST00000569252 GALNT17Q6IS24 598 aa18.39■□□□□ 0.53
USB1-215ENST00000569252 NECAB2Q7Z6G3 386 aa18.39■□□□□ 0.53
USB1-215ENST00000569252 TEX2Q8IWB9 1127 aa18.39■□□□□ 0.53
USB1-215ENST00000569252 SOCS4Q8WXH5 440 aa18.39■□□□□ 0.53
USB1-215ENST00000569252 GDF15Q99988 308 aa18.39■□□□□ 0.53
USB1-215ENST00000569252 POTEB2H3BUK9 544 aa18.38■□□□□ 0.53
USB1-215ENST00000569252 HMGCRP04035 888 aa18.38■□□□□ 0.53
USB1-215ENST00000569252 FDPSP14324 419 aaKnown RBP18.38■□□□□ 0.53
USB1-215ENST00000569252 GNL2Q13823 731 aaKnown RBP18.38■□□□□ 0.53
USB1-215ENST00000569252 BAATQ14032 418 aaPredicted RBP18.38■□□□□ 0.53
USB1-215ENST00000569252 LARP1BQ659C4 914 aaKnown RBP18.38■□□□□ 0.53
USB1-215ENST00000569252 MCTP2Q6DN12 878 aa18.38■□□□□ 0.53
USB1-215ENST00000569252 SPRYD3Q8NCJ5 442 aa18.38■□□□□ 0.53
USB1-215ENST00000569252 CLEC4DQ8WXI8 215 aa18.38■□□□□ 0.53
USB1-215ENST00000569252 RIC8AQ9NPQ8 531 aa18.38■□□□□ 0.53
USB1-215ENST00000569252 RBM19Q9Y4C8 960 aaKnown RBP18.38■□□□□ 0.53
USB1-215ENST00000569252 BAZ2BQ9UIF8 2168 aaKnown RBP18.37■□□□□ 0.53
USB1-215ENST00000569252 UNC80Q8N2C7 3258 aa18.37■□□□□ 0.53
USB1-215ENST00000569252 NFIBO00712 420 aa18.37■□□□□ 0.53
USB1-215ENST00000569252 DTNBO60941 627 aa18.37■□□□□ 0.53
USB1-215ENST00000569252 RGS2P41220 211 aa18.37■□□□□ 0.53
USB1-215ENST00000569252 MAGEA10P43363 369 aaPredicted RBP18.37■□□□□ 0.53
USB1-215ENST00000569252 CCL14Q16627 93 aa18.37■□□□□ 0.53
USB1-215ENST00000569252 ZMYND12Q9H0C1 365 aa18.37■□□□□ 0.53
USB1-215ENST00000569252 EHMT1Q9H9B1 1298 aa18.37■□□□□ 0.53
USB1-215ENST00000569252 TSHZ2Q9NRE2 1034 aa18.37■□□□□ 0.53
USB1-215ENST00000569252 ADD3Q9UEY8 706 aaKnown RBP18.37■□□□□ 0.53
USB1-215ENST00000569252 PARP14Q460N5 1801 aa18.37■□□□□ 0.53
USB1-215ENST00000569252 ESYT2A0FGR8 921 aa18.36■□□□□ 0.53
USB1-215ENST00000569252 SPDYE3A6NKU9 549 aa18.36■□□□□ 0.53
USB1-215ENST00000569252 COL11A1P12107 1806 aaPredicted RBP18.36■□□□□ 0.53
USB1-215ENST00000569252 PDIA4P13667 645 aaKnown RBP18.36■□□□□ 0.53
USB1-215ENST00000569252 PRKAR2AP13861 404 aaKnown RBP18.36■□□□□ 0.53
USB1-215ENST00000569252 TAL1P17542 331 aaPredicted RBP18.36■□□□□ 0.53
USB1-215ENST00000569252 ADORA2AP29274 412 aa18.36■□□□□ 0.53
USB1-215ENST00000569252 FOSBP53539 338 aa18.36■□□□□ 0.53
USB1-215ENST00000569252 RPS6P62753 249 aaKnown RBP18.36■□□□□ 0.53
USB1-215ENST00000569252 AIFM3Q96NN9 605 aa18.36■□□□□ 0.53
USB1-215ENST00000569252 A1CFQ9NQ94 594 aaKnown RBP18.36■□□□□ 0.53
USB1-215ENST00000569252 CYP39A1Q9NYL5 469 aa18.36■□□□□ 0.53
USB1-215ENST00000569252 FOSP01100 380 aaPredicted RBP18.35■□□□□ 0.53
USB1-215ENST00000569252 CCND3P30281 292 aaPredicted RBP18.35■□□□□ 0.53
USB1-215ENST00000569252 MAP2K5Q13163 448 aa18.35■□□□□ 0.53
USB1-215ENST00000569252 GRB14Q14449 540 aa18.35■□□□□ 0.53
USB1-215ENST00000569252 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.35■□□□□ 0.53
USB1-215ENST00000569252 FCHSD1Q86WN1 690 aa18.35■□□□□ 0.53
USB1-215ENST00000569252 C11orf49Q9H6J7 331 aa18.35■□□□□ 0.53
USB1-215ENST00000569252 HMX1Q9NP08 348 aaPredicted RBP18.35■□□□□ 0.53
USB1-215ENST00000569252 PCDHA4Q9UN74 947 aa18.35■□□□□ 0.53
USB1-215ENST00000569252 KCNJ14Q9UNX9 436 aa18.35■□□□□ 0.53
USB1-215ENST00000569252 LAMA2P24043 3122 aaKnown RBP18.35■□□□□ 0.53
USB1-215ENST00000569252 A0A0G2JMZ2 1700 aa18.35■□□□□ 0.53
USB1-215ENST00000569252 RPTORQ8N122 1335 aa18.34■□□□□ 0.53
USB1-215ENST00000569252 MYH6P13533 1939 aa18.34■□□□□ 0.53
USB1-215ENST00000569252 PIK3CDO00329 1044 aa18.34■□□□□ 0.53
USB1-215ENST00000569252 PGK2P07205 417 aa18.34■□□□□ 0.53
USB1-215ENST00000569252 HOXA13P31271 388 aaPredicted RBP18.34■□□□□ 0.53
USB1-215ENST00000569252 KRT2P35908 639 aa18.34■□□□□ 0.53
USB1-215ENST00000569252 MORN1Q5T089 497 aa18.34■□□□□ 0.53
USB1-215ENST00000569252 ARHGEF16Q5VV41 709 aa18.34■□□□□ 0.53
USB1-215ENST00000569252 TRMT44Q8IYL2 757 aaKnown RBP18.34■□□□□ 0.53
USB1-215ENST00000569252 BLIDQ8IZY5 108 aa18.34■□□□□ 0.53
USB1-215ENST00000569252 REXO1Q8N1G1 1221 aaKnown RBP18.34■□□□□ 0.53
USB1-215ENST00000569252 DEFB123Q8N688 67 aa18.34■□□□□ 0.53
USB1-215ENST00000569252 TBC1D5Q92609 795 aa18.34■□□□□ 0.53
USB1-215ENST00000569252 DIS3Q9Y2L1 958 aaKnown RBP18.34■□□□□ 0.53
USB1-215ENST00000569252 HSD17B4P51659 736 aa18.33■□□□□ 0.52
USB1-215ENST00000569252 GUCY1B3Q02153 619 aa18.33■□□□□ 0.52
USB1-215ENST00000569252 KRT40Q6A162 431 aa18.33■□□□□ 0.52
USB1-215ENST00000569252 TYW1BQ6NUM6 668 aa18.33■□□□□ 0.52
USB1-215ENST00000569252 USP17L6PQ6QN14 398 aa18.33■□□□□ 0.52
USB1-215ENST00000569252 DNERQ8NFT8 737 aa18.33■□□□□ 0.52
USB1-215ENST00000569252 FBXO18Q8NFZ0 1043 aa18.33■□□□□ 0.52
USB1-215ENST00000569252 NSUN6Q8TEA1 469 aaKnown RBP18.33■□□□□ 0.52
USB1-215ENST00000569252 RMDN3Q96TC7 470 aa18.33■□□□□ 0.52
USB1-215ENST00000569252 PHF20Q9BVI0 1012 aa18.33■□□□□ 0.52
USB1-215ENST00000569252 DNAH12Q6ZR08 3092 aa18.33■□□□□ 0.52
USB1-215ENST00000569252 A0A1W2PPC1 479 aa18.32■□□□□ 0.52
USB1-215ENST00000569252 ASB14A6NK59 587 aa18.32■□□□□ 0.52
USB1-215ENST00000569252 MEIS2O14770 477 aa18.32■□□□□ 0.52
USB1-215ENST00000569252 MMP1P03956 469 aa18.32■□□□□ 0.52
USB1-215ENST00000569252 MDM2Q00987 491 aaPredicted RBP18.32■□□□□ 0.52
USB1-215ENST00000569252 CACNB2Q08289 660 aaPredicted RBP18.32■□□□□ 0.52
USB1-215ENST00000569252 AP3B2Q13367 1082 aa18.32■□□□□ 0.52
USB1-215ENST00000569252 JAKMIP3Q5VZ66 844 aa18.32■□□□□ 0.52
USB1-215ENST00000569252 MCTP1Q6DN14 999 aa18.32■□□□□ 0.52
USB1-215ENST00000569252 SLC30A10Q6XR72 485 aa18.32■□□□□ 0.52
USB1-215ENST00000569252 SYTL5Q8TDW5 730 aaPredicted RBP18.32■□□□□ 0.52
USB1-215ENST00000569252 CCDC194A0A1B0GVG4 234 aa18.31■□□□□ 0.52
USB1-215ENST00000569252 XRCC5P13010 732 aaKnown RBP18.31■□□□□ 0.52
USB1-215ENST00000569252 GHRHRQ02643 423 aa18.31■□□□□ 0.52
USB1-215ENST00000569252 UBE2SQ16763 222 aa18.31■□□□□ 0.52
USB1-215ENST00000569252 LRRC26Q2I0M4 334 aa18.31■□□□□ 0.52
USB1-215ENST00000569252 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
USB1-215ENST00000569252 APBA2Q99767 749 aa18.31■□□□□ 0.52
USB1-215ENST00000569252 OGDHLQ9ULD0 1010 aa18.31■□□□□ 0.52
USB1-215ENST00000569252 PCDHA6Q9UN73 950 aa18.31■□□□□ 0.52
USB1-215ENST00000569252 PCDHA8Q9Y5H6 950 aa18.31■□□□□ 0.52
USB1-215ENST00000569252 DNAJC25-GNG10A0A024R161 153 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms