RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 PDE4BQ07343 736 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 PDE4DQ08499 809 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 RCSD1Q6JBY9 416 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 CEP85Q6P2H3 762 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 ITPRIPQ8IWB1 547 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 EDAQ92838 391 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 BOLA2Q9H3K6 86 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 NSUN3Q9H649 340 aaKnown RBP10.29□□□□□ -0.76
SMG1-216ENST00000569122 CCPG1Q9ULG6 757 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 EMSYQ7Z589 1322 aa10.29□□□□□ -0.76
SMG1-216ENST00000569122 H3BNC9 293 aa10.28□□□□□ -0.76
SMG1-216ENST00000569122 HMMRO75330 724 aa10.28□□□□□ -0.76
SMG1-216ENST00000569122 ICAM1P05362 532 aa10.28□□□□□ -0.76
SMG1-216ENST00000569122 CASTP20810 708 aaKnown RBP10.28□□□□□ -0.76
SMG1-216ENST00000569122 BAATQ14032 418 aaPredicted RBP10.28□□□□□ -0.76
SMG1-216ENST00000569122 COL19A1Q14993 1142 aa10.28□□□□□ -0.76
SMG1-216ENST00000569122 SPRED2Q7Z698 418 aa10.28□□□□□ -0.76
SMG1-216ENST00000569122 DNERQ8NFT8 737 aa10.28□□□□□ -0.76
SMG1-216ENST00000569122 NEDD1Q8NHV4 660 aa10.28□□□□□ -0.76
SMG1-216ENST00000569122 PBXIP1Q96AQ6 731 aa10.28□□□□□ -0.76
SMG1-216ENST00000569122 STRBPQ96SI9 672 aaKnown RBP10.28□□□□□ -0.76
SMG1-216ENST00000569122 HAUS7Q99871 368 aa10.28□□□□□ -0.76
SMG1-216ENST00000569122 KATNAL1Q9BW62 490 aa10.28□□□□□ -0.76
SMG1-216ENST00000569122 PTPDC1A2A3K4 754 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 GFRA3O60609 400 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 TXNP10599 105 aaKnown RBP10.27□□□□□ -0.77
SMG1-216ENST00000569122 CKBP12277 381 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 PTGS1P23219 599 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 MCCP23508 829 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 IRS1P35568 1242 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 TDO2P48775 406 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 NUBP1P53384 320 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 CHMP4BP1P59074 171 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 PTK7Q13308 1070 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 GPM6BQ13491 265 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 SMAD2Q15796 467 aaKnown RBP10.27□□□□□ -0.77
SMG1-216ENST00000569122 EPC2Q52LR7 807 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 TCEAL5Q5H9L2 206 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 TMEM63BQ5T3F8 832 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 STK11IPQ8N1F8 1099 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 C7orf31Q8N865 590 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 C17orf80Q9BSJ5 609 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 NACAP1Q9BZK3 213 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 PUS7LQ9H0K6 701 aaKnown RBP10.27□□□□□ -0.77
SMG1-216ENST00000569122 CLDND1Q9NY35 253 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 PRR12Q9ULL5 1215 aa10.27□□□□□ -0.77
SMG1-216ENST00000569122 NAV1Q8NEY1 1877 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 GSG1L2A8MUP6 293 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 NBNO60934 754 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 LGR5O75473 907 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 APPP05067 770 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 RB1P06400 928 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 HTRA4P83105 476 aaPredicted RBP10.26□□□□□ -0.77
SMG1-216ENST00000569122 TFAP4Q01664 338 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 MUM1L1Q5H9M0 696 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 GDF6Q6KF10 455 aaPredicted RBP10.26□□□□□ -0.77
SMG1-216ENST00000569122 FAM117BQ6P1L5 589 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 TRIM67Q6ZTA4 783 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 TMCO2Q7Z6W1 182 aaPredicted RBP10.26□□□□□ -0.77
SMG1-216ENST00000569122 RNF135Q8IUD6 432 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 MYOCDQ8IZQ8 938 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 SP7Q8TDD2 431 aaPredicted RBP10.26□□□□□ -0.77
SMG1-216ENST00000569122 PPP2R3CQ969Q6 453 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 YME1L1Q96TA2 773 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 MAF1Q9H063 256 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 LMAN2LQ9H0V9 348 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 MUTYHQ9UIF7 546 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 TNNQ9UQP3 1299 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 RWDD3Q9Y3V2 267 aa10.26□□□□□ -0.77
SMG1-216ENST00000569122 WDFY4Q6ZS81 3184 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 TMEM221A6NGB7 291 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 M0R296 226 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 STXBP3O00186 592 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 PRDM1O75626 825 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 ZFYP08048 801 aaPredicted RBP10.25□□□□□ -0.77
SMG1-216ENST00000569122 SMAD4Q13485 552 aaKnown RBP10.25□□□□□ -0.77
SMG1-216ENST00000569122 GPNMBQ14956 572 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 DGKDQ16760 1214 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 RNF207Q6ZRF8 634 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 ERMP1Q7Z2K6 904 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 TMEM192Q8IY95 271 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 PRSS33Q8NF86 280 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 RANBP17Q9H2T7 1088 aaKnown RBP10.25□□□□□ -0.77
SMG1-216ENST00000569122 GTF2IRD1Q9UHL9 959 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 STX8Q9UNK0 236 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 PLIN4Q96Q06 1357 aa10.25□□□□□ -0.77
SMG1-216ENST00000569122 COL11A1P12107 1806 aaPredicted RBP10.24□□□□□ -0.77
SMG1-216ENST00000569122 PATL2C9JE40 543 aaKnown RBP10.24□□□□□ -0.77
SMG1-216ENST00000569122 GH1P01241 217 aa10.24□□□□□ -0.77
SMG1-216ENST00000569122 EDNRBP24530 442 aa10.24□□□□□ -0.77
SMG1-216ENST00000569122 CALML3P27482 149 aa10.24□□□□□ -0.77
SMG1-216ENST00000569122 CTC1Q2NKJ3 1217 aa10.24□□□□□ -0.77
SMG1-216ENST00000569122 SLFNL1Q499Z3 407 aa10.24□□□□□ -0.77
SMG1-216ENST00000569122 KCTD1Q719H9 257 aa10.24□□□□□ -0.77
SMG1-216ENST00000569122 RPAINQ86UA6 219 aa10.24□□□□□ -0.77
SMG1-216ENST00000569122 FBXO11Q86XK2 927 aa10.24□□□□□ -0.77
SMG1-216ENST00000569122 FBXL6Q8N531 539 aa10.24□□□□□ -0.77
SMG1-216ENST00000569122 DCAF4Q8WV16 495 aa10.24□□□□□ -0.77
SMG1-216ENST00000569122 APPBP2Q92624 585 aa10.24□□□□□ -0.77
SMG1-216ENST00000569122 ATOH1Q92858 354 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms