RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 CXCL17Q6UXB2 119 aa21.05■□□□□ 0.96
SIN3A-212ENST00000568919 CTCFLQ8NI51 663 aaPredicted RBP21.05■□□□□ 0.96
SIN3A-212ENST00000568919 BADQ92934 168 aa21.05■□□□□ 0.96
SIN3A-212ENST00000568919 NEK1Q96PY6 1258 aa21.05■□□□□ 0.96
SIN3A-212ENST00000568919 IWS1Q96ST2 819 aa21.05■□□□□ 0.96
SIN3A-212ENST00000568919 LRRC2Q9BYS8 371 aa21.05■□□□□ 0.96
SIN3A-212ENST00000568919 MAP3K20Q9NYL2 800 aaKnown RBP21.05■□□□□ 0.96
SIN3A-212ENST00000568919 A0A0U1RQG5 324 aaPredicted RBP21.04■□□□□ 0.96
SIN3A-212ENST00000568919 SOX1O00570 391 aaPredicted RBP21.04■□□□□ 0.96
SIN3A-212ENST00000568919 KIAA0355O15063 1070 aa21.04■□□□□ 0.96
SIN3A-212ENST00000568919 CABYRO75952 493 aa21.04■□□□□ 0.96
SIN3A-212ENST00000568919 KIF5BP33176 963 aa21.04■□□□□ 0.96
SIN3A-212ENST00000568919 ARHGEF16Q5VV41 709 aa21.04■□□□□ 0.96
SIN3A-212ENST00000568919 RASEFQ8IZ41 740 aa21.04■□□□□ 0.96
SIN3A-212ENST00000568919 SAMD3Q8N6K7 520 aa21.04■□□□□ 0.96
SIN3A-212ENST00000568919 SCFD2Q8WU76 684 aa21.04■□□□□ 0.96
SIN3A-212ENST00000568919 TMEM39AQ9NV64 488 aa21.04■□□□□ 0.96
SIN3A-212ENST00000568919 TXNP10599 105 aaKnown RBP21.03■□□□□ 0.96
SIN3A-212ENST00000568919 ITGB8P26012 769 aa21.03■□□□□ 0.96
SIN3A-212ENST00000568919 SMARCA1P28370 1054 aa21.03■□□□□ 0.96
SIN3A-212ENST00000568919 EXOSC10Q01780 885 aaKnown RBP21.03■□□□□ 0.96
SIN3A-212ENST00000568919 STXBP2Q15833 593 aa21.03■□□□□ 0.96
SIN3A-212ENST00000568919 PIBF1Q8WXW3 757 aa21.03■□□□□ 0.96
SIN3A-212ENST00000568919 NKRFO15226 690 aaKnown RBP eCLIP21.02■□□□□ 0.964e-7■□□□□ 9.1
SIN3A-212ENST00000568919 NR3C2P08235 984 aa21.02■□□□□ 0.96
SIN3A-212ENST00000568919 EIF2AK2P19525 551 aaKnown RBP21.02■□□□□ 0.96
SIN3A-212ENST00000568919 HOXA13P31271 388 aaPredicted RBP21.02■□□□□ 0.96
SIN3A-212ENST00000568919 PPP2R5BQ15173 497 aa21.02■□□□□ 0.96
SIN3A-212ENST00000568919 ADCK5Q3MIX3 580 aa21.02■□□□□ 0.96
SIN3A-212ENST00000568919 LRIT3Q3SXY7 679 aa21.02■□□□□ 0.96
SIN3A-212ENST00000568919 SRBD1Q8N5C6 995 aaKnown RBP21.02■□□□□ 0.96
SIN3A-212ENST00000568919 SLC43A3Q8NBI5 491 aa21.02■□□□□ 0.96
SIN3A-212ENST00000568919 OR6J1Q8NGC5 347 aa21.02■□□□□ 0.96
SIN3A-212ENST00000568919 COPS5Q92905 334 aa21.02■□□□□ 0.96
SIN3A-212ENST00000568919 LZTS2Q9BRK4 669 aa21.02■□□□□ 0.96
SIN3A-212ENST00000568919 SPZ1Q9BXG8 430 aa21.02■□□□□ 0.96
SIN3A-212ENST00000568919 PXMP2Q9NR77 195 aa21.02■□□□□ 0.96
SIN3A-212ENST00000568919 GRIN2DO15399 1336 aa21.02■□□□□ 0.95
SIN3A-212ENST00000568919 MROH7Q68CQ1 1323 aa21.02■□□□□ 0.95
SIN3A-212ENST00000568919 LTBP2Q14767 1821 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 GCOM1H8Y6P7 765 aaPredicted RBP21.01■□□□□ 0.95
SIN3A-212ENST00000568919 POLR2MP0CAP2 368 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 CALM1P0DP23 149 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 CALM2P0DP24 149 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 CALM3P0DP25 149 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 RXRAP19793 462 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 GNAQP50148 359 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 ITGA7Q13683 1181 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 TTLL4Q14679 1199 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 CCDC62Q6P9F0 684 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 SEPT14Q6ZU15 432 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 DHX32Q7L7V1 743 aaKnown RBP21.01■□□□□ 0.95
SIN3A-212ENST00000568919 LRCH3Q96II8 777 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 SLC12A7Q9Y666 1083 aa21.01■□□□□ 0.95
SIN3A-212ENST00000568919 EIF3JO75822 258 aaKnown RBP21■□□□□ 0.95
SIN3A-212ENST00000568919 ARIH2O95376 493 aa21■□□□□ 0.95
SIN3A-212ENST00000568919 PLEKHA8P1O95397 391 aa21■□□□□ 0.95
SIN3A-212ENST00000568919 RAG1P15918 1043 aa21■□□□□ 0.95
SIN3A-212ENST00000568919 CPT1AP50416 773 aa21■□□□□ 0.95
SIN3A-212ENST00000568919 SGMS1Q86VZ5 419 aa21■□□□□ 0.95
SIN3A-212ENST00000568919 RAB11FIP4Q86YS3 637 aa21■□□□□ 0.95
SIN3A-212ENST00000568919 FAM126BQ8IXS8 530 aa21■□□□□ 0.95
SIN3A-212ENST00000568919 CMTR1Q8N1G2 835 aaKnown RBP21■□□□□ 0.95
SIN3A-212ENST00000568919 FANCBQ8NB91 859 aa21■□□□□ 0.95
SIN3A-212ENST00000568919 RRP36Q96EU6 259 aaKnown RBP21■□□□□ 0.95
SIN3A-212ENST00000568919 PSMC6P62333 389 aa20.99■□□□□ 0.95
SIN3A-212ENST00000568919 KRT32Q14532 448 aa20.99■□□□□ 0.95
SIN3A-212ENST00000568919 LY6KQ17RY6 165 aa20.99■□□□□ 0.95
SIN3A-212ENST00000568919 KCNB2Q92953 911 aa20.99■□□□□ 0.95
SIN3A-212ENST00000568919 PDCD2LQ9BRP1 358 aa20.99■□□□□ 0.95
SIN3A-212ENST00000568919 POLR3EQ9NVU0 708 aa20.99■□□□□ 0.95
SIN3A-212ENST00000568919 TBX21Q9UL17 535 aa20.99■□□□□ 0.95
SIN3A-212ENST00000568919 KIAA1217Q5T5P2 1943 aa20.98■□□□□ 0.95
SIN3A-212ENST00000568919 A6NJR5 290 aa20.98■□□□□ 0.95
SIN3A-212ENST00000568919 TLR3O15455 904 aaKnown RBP20.98■□□□□ 0.95
SIN3A-212ENST00000568919 TIMP1P01033 207 aa20.98■□□□□ 0.95
SIN3A-212ENST00000568919 CD4P01730 458 aa20.98■□□□□ 0.95
SIN3A-212ENST00000568919 MYL3P08590 195 aa20.98■□□□□ 0.95
SIN3A-212ENST00000568919 PURAQ00577 322 aaKnown RBP20.98■□□□□ 0.95
SIN3A-212ENST00000568919 SHHQ15465 462 aa20.98■□□□□ 0.95
SIN3A-212ENST00000568919 BRDTQ58F21 947 aaPredicted RBP20.98■□□□□ 0.95
SIN3A-212ENST00000568919 SYNE3Q6ZMZ3 975 aa20.98■□□□□ 0.95
SIN3A-212ENST00000568919 FCHSD1Q86WN1 690 aa20.98■□□□□ 0.95
SIN3A-212ENST00000568919 TCEANC2Q96MN5 208 aa20.98■□□□□ 0.95
SIN3A-212ENST00000568919 SEZ6LQ9BYH1 1024 aa20.98■□□□□ 0.95
SIN3A-212ENST00000568919 PPP4R2Q9NY27 417 aa20.98■□□□□ 0.95
SIN3A-212ENST00000568919 MYCLP12524 364 aaPredicted RBP20.97■□□□□ 0.95
SIN3A-212ENST00000568919 PGM5Q15124 567 aa20.97■□□□□ 0.95
SIN3A-212ENST00000568919 VSIG10LQ86VR7 867 aa20.97■□□□□ 0.95
SIN3A-212ENST00000568919 DDX41Q9UJV9 622 aaKnown RBP20.97■□□□□ 0.95
SIN3A-212ENST00000568919 BRPF3Q9ULD4 1205 aa20.97■□□□□ 0.95
SIN3A-212ENST00000568919 KPNA6O60684 536 aa20.96■□□□□ 0.95
SIN3A-212ENST00000568919 RGS20O76081 388 aa20.96■□□□□ 0.95
SIN3A-212ENST00000568919 HMGB1P09429 215 aaKnown RBP20.96■□□□□ 0.95
SIN3A-212ENST00000568919 HSPA4P34932 840 aa20.96■□□□□ 0.95
SIN3A-212ENST00000568919 EPHB4P54760 987 aa20.96■□□□□ 0.95
SIN3A-212ENST00000568919 C9orf50Q5SZB4 431 aa20.96■□□□□ 0.95
SIN3A-212ENST00000568919 ERICH6BQ5W0A0 696 aa20.96■□□□□ 0.95
SIN3A-212ENST00000568919 APOA5Q6Q788 366 aa20.96■□□□□ 0.95
SIN3A-212ENST00000568919 CCDC82Q8N4S0 544 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms