RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 ANKIB1Q9P2G1 1089 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 SIK3Q9Y2K2 1263 aa20.4■□□□□ 0.86
PKD1-235ENST00000568591 POTEMA6NI47 508 aa20.39■□□□□ 0.85
PKD1-235ENST00000568591 LAD1O00515 517 aa20.39■□□□□ 0.85
PKD1-235ENST00000568591 SLC37A4O43826 429 aa20.39■□□□□ 0.85
PKD1-235ENST00000568591 KIF11P52732 1056 aa20.39■□□□□ 0.85
PKD1-235ENST00000568591 CKAP4Q07065 602 aaKnown RBP20.39■□□□□ 0.85
PKD1-235ENST00000568591 RETREG2Q8NC44 543 aa20.39■□□□□ 0.85
PKD1-235ENST00000568591 ANKRD2Q9GZV1 360 aa20.39■□□□□ 0.85
PKD1-235ENST00000568591 VIPAS39Q9H9C1 493 aa20.39■□□□□ 0.85
PKD1-235ENST00000568591 SNX12Q9UMY4 172 aa20.39■□□□□ 0.85
PKD1-235ENST00000568591 PCDHA13Q9Y5I0 950 aa20.39■□□□□ 0.85
PKD1-235ENST00000568591 TARSL2A2RTX5 802 aaKnown RBP20.38■□□□□ 0.85
PKD1-235ENST00000568591 LRRC53A6NM62 1247 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 EDIL3O43854 480 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 TMC4Q7Z404 712 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 KCNK18Q7Z418 384 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 AFAP1L1Q8TED9 768 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 PNMA5Q96PV4 448 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 NDST4Q9H3R1 872 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 MYH1P12882 1939 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 TDP2O95551 362 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 SPA17Q15506 151 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 AK8Q96MA6 479 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 EYA3Q99504 573 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 SH2D4AQ9H788 454 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 PLAGL2Q9UPG8 496 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 ROBO1Q9Y6N7 1651 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 FRMPD2Q68DX3 1309 aaPredicted RBP20.38■□□□□ 0.85
PKD1-235ENST00000568591 SNED1Q8TER0 1413 aa20.38■□□□□ 0.85
PKD1-235ENST00000568591 APBA1Q02410 837 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 VWA3BQ502W6 1294 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 CENPPQ6IPU0 288 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 GALNT17Q6IS24 598 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 RRAGAQ7L523 313 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 KRT25Q7Z3Z0 450 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 CEP95Q96GE4 821 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 EHD4Q9H223 541 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 ACBD3Q9H3P7 528 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 RABEP2Q9H5N1 569 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 MYH10P35580 1976 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 ROBO3Q96MS0 1386 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 ANO9A1A5B4 782 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 USP17L5A8MUK1 530 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 CDK8P49336 464 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 CLEC10AQ8IUN9 316 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 FAM114A1Q8IWE2 563 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 COA7Q96BR5 231 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 CUEDC2Q9H467 287 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 KANSL2Q9H9L4 492 aa20.37■□□□□ 0.85
PKD1-235ENST00000568591 GFPT1Q06210 699 aaPredicted RBP20.36■□□□□ 0.85
PKD1-235ENST00000568591 MAP9Q49MG5 647 aa20.36■□□□□ 0.85
PKD1-235ENST00000568591 CNNM4Q6P4Q7 775 aa20.36■□□□□ 0.85
PKD1-235ENST00000568591 CCDC88AQ3V6T2 1871 aa20.36■□□□□ 0.85
PKD1-235ENST00000568591 SND1Q7KZF4 910 aaKnown RBP eCLIP20.36■□□□□ 0.85
PKD1-235ENST00000568591 CCDC47Q96A33 483 aaKnown RBP20.36■□□□□ 0.85
PKD1-235ENST00000568591 CRACR2AQ9BSW2 395 aa20.36■□□□□ 0.85
PKD1-235ENST00000568591 SPZ1Q9BXG8 430 aa20.36■□□□□ 0.85
PKD1-235ENST00000568591 RASSF4Q9H2L5 321 aa20.36■□□□□ 0.85
PKD1-235ENST00000568591 DEF6Q9H4E7 631 aa20.36■□□□□ 0.85
PKD1-235ENST00000568591 C6orf50Q9HD87 102 aa20.36■□□□□ 0.85
PKD1-235ENST00000568591 A0A1W2PQJ5 194 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 BUB1O43683 1085 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 ZPR1O75312 459 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 RPS6KA5O75582 802 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 DNA2P51530 1060 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 SPTY2D1Q68D10 685 aaPredicted RBP20.35■□□□□ 0.85
PKD1-235ENST00000568591 SPATA4Q8NEY3 305 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 AENQ8WTP8 325 aaKnown RBP20.35■□□□□ 0.85
PKD1-235ENST00000568591 CDCA7Q9BWT1 371 aaPredicted RBP20.35■□□□□ 0.85
PKD1-235ENST00000568591 JRKLQ9Y4A0 524 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 AKR1B10O60218 316 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 IVLP07476 585 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 ECM1Q16610 540 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 FIGNQ5HY92 759 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 SMARCC1Q92922 1105 aaPredicted RBP20.35■□□□□ 0.85
PKD1-235ENST00000568591 MTMR8Q96EF0 704 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 CALML4Q96GE6 196 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 RPGRIP1Q96KN7 1286 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 OSBPL9Q96SU4 736 aa20.35■□□□□ 0.85
PKD1-235ENST00000568591 RTFDC1Q9BY42 306 aaPredicted RBP20.35■□□□□ 0.85
PKD1-235ENST00000568591 COL5A3P25940 1745 aaPredicted RBP20.34■□□□□ 0.85
PKD1-235ENST00000568591 BTDP43251 543 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 EIF6P56537 245 aaKnown RBP20.34■□□□□ 0.85
PKD1-235ENST00000568591 CDK17Q00537 523 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 SV2BQ7L1I2 683 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 REXO1Q8N1G1 1221 aaKnown RBP20.34■□□□□ 0.85
PKD1-235ENST00000568591 BAP1Q92560 729 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 MS4A14Q96JA4 679 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 FGFBP2Q9BYJ0 223 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 MAGEF1Q9HAY2 307 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 GNPATO15228 680 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 SLC1A4P43007 532 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 RASSF7Q02833 373 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 TRIM58Q8NG06 486 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 LARP4BQ92615 738 aaKnown RBP20.34■□□□□ 0.85
PKD1-235ENST00000568591 MTMR9Q96QG7 549 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 NLRC4Q9NPP4 1024 aa20.34■□□□□ 0.85
PKD1-235ENST00000568591 HNRNPH3P31942 346 aaKnown RBP20.33■□□□□ 0.85
PKD1-235ENST00000568591 CALCRLQ16602 461 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms