RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 NKRFO15226 690 aaKnown RBP eCLIP34.1■■■■□ 3.05
RAB40C-211ENST00000568586 NEFLP07196 543 aa34.1■■■■□ 3.05
RAB40C-211ENST00000568586 KIF5BP33176 963 aa34.1■■■■□ 3.05
RAB40C-211ENST00000568586 FAAP100Q0VG06 881 aa34.1■■■■□ 3.05
RAB40C-211ENST00000568586 LRIT3Q3SXY7 679 aa34.1■■■■□ 3.05
RAB40C-211ENST00000568586 RMDN3Q96TC7 470 aa34.1■■■■□ 3.05
RAB40C-211ENST00000568586 LZTS2Q9BRK4 669 aa34.1■■■■□ 3.05
RAB40C-211ENST00000568586 ARVCFO00192 962 aa34.09■■■■□ 3.05
RAB40C-211ENST00000568586 ZEB2O60315 1214 aa34.09■■■■□ 3.05
RAB40C-211ENST00000568586 PQBP1O60828 265 aaKnown RBP34.09■■■■□ 3.05
RAB40C-211ENST00000568586 SGMS1Q86VZ5 419 aa34.09■■■■□ 3.05
RAB40C-211ENST00000568586 HOMER1Q86YM7 354 aa34.09■■■■□ 3.05
RAB40C-211ENST00000568586 CTCFLQ8NI51 663 aaPredicted RBP34.09■■■■□ 3.05
RAB40C-211ENST00000568586 PRDM5Q9NQX1 630 aaPredicted RBP34.09■■■■□ 3.05
RAB40C-211ENST00000568586 DCDC2CA8MYV0 355 aa34.08■■■■□ 3.05
RAB40C-211ENST00000568586 CFBP00751 764 aa34.08■■■■□ 3.05
RAB40C-211ENST00000568586 CXCL17Q6UXB2 119 aa34.08■■■■□ 3.05
RAB40C-211ENST00000568586 RASEFQ8IZ41 740 aa34.08■■■■□ 3.05
RAB40C-211ENST00000568586 NEK1Q96PY6 1258 aa34.08■■■■□ 3.05
RAB40C-211ENST00000568586 MYL10Q9BUA6 226 aa34.08■■■■□ 3.05
RAB40C-211ENST00000568586 SEZ6LQ9BYH1 1024 aa34.08■■■■□ 3.05
RAB40C-211ENST00000568586 CCDC69A6NI79 296 aa34.07■■■■□ 3.04
RAB40C-211ENST00000568586 GNAQP50148 359 aa34.07■■■■□ 3.04
RAB40C-211ENST00000568586 EXOSC10Q01780 885 aaKnown RBP34.07■■■■□ 3.04
RAB40C-211ENST00000568586 CCDC62Q6P9F0 684 aa34.07■■■■□ 3.04
RAB40C-211ENST00000568586 KCNB2Q92953 911 aa34.07■■■■□ 3.04
RAB40C-211ENST00000568586 PXMP2Q9NR77 195 aa34.07■■■■□ 3.04
RAB40C-211ENST00000568586 CALM1P0DP23 149 aa34.06■■■■□ 3.04
RAB40C-211ENST00000568586 CALM2P0DP24 149 aa34.06■■■■□ 3.04
RAB40C-211ENST00000568586 CALM3P0DP25 149 aa34.06■■■■□ 3.04
RAB40C-211ENST00000568586 ITGB8P26012 769 aa34.06■■■■□ 3.04
RAB40C-211ENST00000568586 PPP2R5BQ15173 497 aa34.06■■■■□ 3.04
RAB40C-211ENST00000568586 STXBP2Q15833 593 aa34.06■■■■□ 3.04
RAB40C-211ENST00000568586 TBX21Q9UL17 535 aa34.06■■■■□ 3.04
RAB40C-211ENST00000568586 SOX1O00570 391 aaPredicted RBP34.05■■■■□ 3.04
RAB40C-211ENST00000568586 TTLL4Q14679 1199 aa34.05■■■■□ 3.04
RAB40C-211ENST00000568586 ERICH6BQ5W0A0 696 aa34.05■■■■□ 3.04
RAB40C-211ENST00000568586 NFXL1Q6ZNB6 911 aa34.05■■■■□ 3.04
RAB40C-211ENST00000568586 BADQ92934 168 aa34.05■■■■□ 3.04
RAB40C-211ENST00000568586 VTI1AQ96AJ9 217 aa34.05■■■■□ 3.04
RAB40C-211ENST00000568586 TMEM39AQ9NV64 488 aa34.05■■■■□ 3.04
RAB40C-211ENST00000568586 GRIN2DO15399 1336 aa34.04■■■■□ 3.04
RAB40C-211ENST00000568586 KRT32Q14532 448 aa34.04■■■■□ 3.04
RAB40C-211ENST00000568586 ARHGEF16Q5VV41 709 aa34.04■■■■□ 3.04
RAB40C-211ENST00000568586 DHX32Q7L7V1 743 aaKnown RBP34.04■■■■□ 3.04
RAB40C-211ENST00000568586 FAM126BQ8IXS8 530 aa34.04■■■■□ 3.04
RAB40C-211ENST00000568586 SLC12A7Q9Y666 1083 aa34.04■■■■□ 3.04
RAB40C-211ENST00000568586 LAMA2P24043 3122 aaKnown RBP34.03■■■■□ 3.04
RAB40C-211ENST00000568586 A6NJR5 290 aa34.03■■■■□ 3.04
RAB40C-211ENST00000568586 EIF3JO75822 258 aaKnown RBP34.03■■■■□ 3.04
RAB40C-211ENST00000568586 ARIH2O95376 493 aa34.03■■■■□ 3.04
RAB40C-211ENST00000568586 NR3C2P08235 984 aa34.03■■■■□ 3.04
RAB40C-211ENST00000568586 TXNP10599 105 aaKnown RBP34.03■■■■□ 3.04
RAB40C-211ENST00000568586 CPT1AP50416 773 aa34.03■■■■□ 3.04
RAB40C-211ENST00000568586 LRRC2Q9BYS8 371 aa34.03■■■■□ 3.04
RAB40C-211ENST00000568586 CD4P01730 458 aa34.02■■■■□ 3.04
RAB40C-211ENST00000568586 ADCK5Q3MIX3 580 aa34.02■■■■□ 3.04
RAB40C-211ENST00000568586 GPR153Q6NV75 609 aa34.02■■■■□ 3.04
RAB40C-211ENST00000568586 SRBD1Q8N5C6 995 aaKnown RBP34.02■■■■□ 3.04
RAB40C-211ENST00000568586 OR6J1Q8NGC5 347 aa34.02■■■■□ 3.04
RAB40C-211ENST00000568586 RRP36Q96EU6 259 aaKnown RBP34.02■■■■□ 3.04
RAB40C-211ENST00000568586 PDCD2LQ9BRP1 358 aa34.02■■■■□ 3.04
RAB40C-211ENST00000568586 POLR3EQ9NVU0 708 aa34.02■■■■□ 3.04
RAB40C-211ENST00000568586 GCOM1H8Y6P7 765 aaPredicted RBP34.01■■■■□ 3.03
RAB40C-211ENST00000568586 POLR2MP0CAP2 368 aa34.01■■■■□ 3.03
RAB40C-211ENST00000568586 EIF2AK2P19525 551 aaKnown RBP34.01■■■■□ 3.03
RAB40C-211ENST00000568586 PURAQ00577 322 aaKnown RBP34.01■■■■□ 3.03
RAB40C-211ENST00000568586 ITGA7Q13683 1181 aa34.01■■■■□ 3.03
RAB40C-211ENST00000568586 FANCBQ8NB91 859 aa34.01■■■■□ 3.03
RAB40C-211ENST00000568586 PLEKHA8P1O95397 391 aa34■■■■□ 3.03
RAB40C-211ENST00000568586 HOXA13P31271 388 aaPredicted RBP34■■■■□ 3.03
RAB40C-211ENST00000568586 VSIG10LQ86VR7 867 aa34■■■■□ 3.03
RAB40C-211ENST00000568586 COPS5Q92905 334 aa34■■■■□ 3.03
RAB40C-211ENST00000568586 KPNA6O60684 536 aa33.99■■■■□ 3.03
RAB40C-211ENST00000568586 HMGB1P09429 215 aaKnown RBP33.99■■■■□ 3.03
RAB40C-211ENST00000568586 RAG1P15918 1043 aa33.99■■■■□ 3.03
RAB40C-211ENST00000568586 TIMP1P01033 207 aa33.98■■■■□ 3.03
RAB40C-211ENST00000568586 RXRAP19793 462 aa33.98■■■■□ 3.03
RAB40C-211ENST00000568586 HSPA4P34932 840 aa33.98■■■■□ 3.03
RAB40C-211ENST00000568586 BRDTQ58F21 947 aaPredicted RBP33.98■■■■□ 3.03
RAB40C-211ENST00000568586 SEPT14Q6ZU15 432 aa33.98■■■■□ 3.03
RAB40C-211ENST00000568586 LRCH3Q96II8 777 aa33.98■■■■□ 3.03
RAB40C-211ENST00000568586 DDX41Q9UJV9 622 aaKnown RBP33.98■■■■□ 3.03
RAB40C-211ENST00000568586 TLR3O15455 904 aaKnown RBP33.97■■■■□ 3.03
RAB40C-211ENST00000568586 APOA5Q6Q788 366 aa33.97■■■■□ 3.03
RAB40C-211ENST00000568586 TMTC3Q6ZXV5 915 aa33.97■■■■□ 3.03
RAB40C-211ENST00000568586 EMID1Q96A84 441 aaPredicted RBP33.97■■■■□ 3.03
RAB40C-211ENST00000568586 PPP4R2Q9NY27 417 aa33.97■■■■□ 3.03
RAB40C-211ENST00000568586 FRMPD4Q14CM0 1322 aa33.97■■■■□ 3.03
RAB40C-211ENST00000568586 KIAA1217Q5T5P2 1943 aa33.96■■■■□ 3.03
RAB40C-211ENST00000568586 EPB41L2O43491 1005 aaKnown RBP33.96■■■■□ 3.03
RAB40C-211ENST00000568586 RGS20O76081 388 aa33.96■■■■□ 3.03
RAB40C-211ENST00000568586 ARHGAP1Q07960 439 aa33.96■■■■□ 3.03
RAB40C-211ENST00000568586 PGM5Q15124 567 aa33.96■■■■□ 3.03
RAB40C-211ENST00000568586 MTG1Q9BT17 334 aaPredicted RBP33.96■■■■□ 3.03
RAB40C-211ENST00000568586 SEC63Q9UGP8 760 aaKnown RBP33.96■■■■□ 3.03
RAB40C-211ENST00000568586 PIK3CDO00329 1044 aa33.95■■■■□ 3.03
RAB40C-211ENST00000568586 GH1P01241 217 aa33.95■■■■□ 3.03
RAB40C-211ENST00000568586 PSMC6P62333 389 aa33.95■■■■□ 3.03
RAB40C-211ENST00000568586 LY6KQ17RY6 165 aa33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms