RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 CPT1AP50416 773 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 TTLL4Q14679 1199 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 SLC35G1Q2M3R5 365 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 BRDTQ58F21 947 aaPredicted RBP16.76■□□□□ 0.27
CMTM3-215ENST00000568477 FAM126BQ8IXS8 530 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 CCDC136Q96JN2 1154 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 PIGSQ96S52 555 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 IWS1Q96ST2 819 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 SEZ6LQ9BYH1 1024 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 LY9Q9HBG7 655 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 POLR3EQ9NVU0 708 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 PCDHA1Q9Y5I3 950 aa16.76■□□□□ 0.27
CMTM3-215ENST00000568477 BAZ2BQ9UIF8 2168 aaKnown RBP16.75■□□□□ 0.27
CMTM3-215ENST00000568477 OPLAHO14841 1288 aa16.75■□□□□ 0.27
CMTM3-215ENST00000568477 TXNP10599 105 aaKnown RBP16.75■□□□□ 0.27
CMTM3-215ENST00000568477 HSD17B4P51659 736 aa16.75■□□□□ 0.27
CMTM3-215ENST00000568477 GHRHRQ02643 423 aa16.75■□□□□ 0.27
CMTM3-215ENST00000568477 FPGSQ05932 587 aa16.75■□□□□ 0.27
CMTM3-215ENST00000568477 ITGA7Q13683 1181 aa16.75■□□□□ 0.27
CMTM3-215ENST00000568477 NECTIN1Q15223 517 aa16.75■□□□□ 0.27
CMTM3-215ENST00000568477 SHHQ15465 462 aa16.75■□□□□ 0.27
CMTM3-215ENST00000568477 C9orf50Q5SZB4 431 aa16.75■□□□□ 0.27
CMTM3-215ENST00000568477 ARHGEF16Q5VV41 709 aa16.75■□□□□ 0.27
CMTM3-215ENST00000568477 ZNF654Q8IZM8 581 aa16.75■□□□□ 0.27
CMTM3-215ENST00000568477 SLC43A3Q8NBI5 491 aa16.75■□□□□ 0.27
CMTM3-215ENST00000568477 CTCFLQ8NI51 663 aaPredicted RBP16.75■□□□□ 0.27
CMTM3-215ENST00000568477 TMEM87BQ96K49 555 aa16.75■□□□□ 0.27
CMTM3-215ENST00000568477 GPHNQ9NQX3 736 aaPredicted RBP16.75■□□□□ 0.27
CMTM3-215ENST00000568477 PNMA6FA0A0J9YX94 578 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 SH2B2O14492 632 aaPredicted RBP16.74■□□□□ 0.27
CMTM3-215ENST00000568477 CYTH3O43739 400 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 CDC45O75419 566 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 TIMP1P01033 207 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 MYL3P08590 195 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 EIF2AK2P19525 551 aaKnown RBP16.74■□□□□ 0.27
CMTM3-215ENST00000568477 KIF5BP33176 963 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 PSMC6P62333 389 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 STXBP2Q15833 593 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 NFXL1Q6ZNB6 911 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 TMTC2Q8N394 836 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 SAMD3Q8N6K7 520 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 MAP3K14Q99558 947 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 PXMP2Q9NR77 195 aa16.74■□□□□ 0.27
CMTM3-215ENST00000568477 MAP3K20Q9NYL2 800 aaKnown RBP16.74■□□□□ 0.27
CMTM3-215ENST00000568477 GRIN2DO15399 1336 aa16.73■□□□□ 0.27
CMTM3-215ENST00000568477 CCDC69A6NI79 296 aa16.73■□□□□ 0.27
CMTM3-215ENST00000568477 SEPT14Q6ZU15 432 aa16.73■□□□□ 0.27
CMTM3-215ENST00000568477 COPS5Q92905 334 aa16.73■□□□□ 0.27
CMTM3-215ENST00000568477 MYL10Q9BUA6 226 aa16.73■□□□□ 0.27
CMTM3-215ENST00000568477 GCOM1H8Y6P7 765 aaPredicted RBP16.72■□□□□ 0.27
CMTM3-215ENST00000568477 KPNA6O60684 536 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 EIF3JO75822 258 aaKnown RBP16.72■□□□□ 0.27
CMTM3-215ENST00000568477 ARIH2O95376 493 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 CD4P01730 458 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 NR3C2P08235 984 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 POLR2MP0CAP2 368 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 EPHB4P54760 987 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 PURAQ00577 322 aaKnown RBP16.72■□□□□ 0.27
CMTM3-215ENST00000568477 MFSD5Q6N075 450 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 CCDC62Q6P9F0 684 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 DEFB123Q8N688 67 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 PIBF1Q8WXW3 757 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 LZTS2Q9BRK4 669 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 MTG1Q9BT17 334 aaPredicted RBP16.72■□□□□ 0.27
CMTM3-215ENST00000568477 SPZ1Q9BXG8 430 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 PPP1R12CQ9BZL4 782 aa16.72■□□□□ 0.27
CMTM3-215ENST00000568477 A6NJR5 290 aa16.71■□□□□ 0.27
CMTM3-215ENST00000568477 GH1P01241 217 aa16.71■□□□□ 0.27
CMTM3-215ENST00000568477 HOXA13P31271 388 aaPredicted RBP16.71■□□□□ 0.27
CMTM3-215ENST00000568477 LIFRP42702 1097 aa16.71■□□□□ 0.27
CMTM3-215ENST00000568477 GNAQP50148 359 aa16.71■□□□□ 0.27
CMTM3-215ENST00000568477 PPIGQ13427 754 aaKnown RBP eCLIP16.71■□□□□ 0.27
CMTM3-215ENST00000568477 TMEM199Q8N511 208 aa16.71■□□□□ 0.27
CMTM3-215ENST00000568477 RRP36Q96EU6 259 aaKnown RBP16.71■□□□□ 0.27
CMTM3-215ENST00000568477 RNPC3Q96LT9 517 aaKnown RBP16.71■□□□□ 0.27
CMTM3-215ENST00000568477 PDCD2LQ9BRP1 358 aa16.71■□□□□ 0.27
CMTM3-215ENST00000568477 CALM1P0DP23 149 aa16.7■□□□□ 0.26
CMTM3-215ENST00000568477 CALM2P0DP24 149 aa16.7■□□□□ 0.26
CMTM3-215ENST00000568477 CALM3P0DP25 149 aa16.7■□□□□ 0.26
CMTM3-215ENST00000568477 MYCLP12524 364 aaPredicted RBP16.7■□□□□ 0.26
CMTM3-215ENST00000568477 SMARCA1P28370 1054 aa16.7■□□□□ 0.26
CMTM3-215ENST00000568477 COL9A3Q14050 684 aaPredicted RBP16.7■□□□□ 0.26
CMTM3-215ENST00000568477 Q7L0L9 218 aa16.7■□□□□ 0.26
CMTM3-215ENST00000568477 LRRC2Q9BYS8 371 aa16.7■□□□□ 0.26
CMTM3-215ENST00000568477 TRPV6Q9H1D0 765 aa16.7■□□□□ 0.26
CMTM3-215ENST00000568477 ALDH8A1Q9H2A2 487 aaPredicted RBP16.7■□□□□ 0.26
CMTM3-215ENST00000568477 HIPK3Q9H422 1215 aa16.7■□□□□ 0.26
CMTM3-215ENST00000568477 SEC63Q9UGP8 760 aaKnown RBP16.7■□□□□ 0.26
CMTM3-215ENST00000568477 SLC12A7Q9Y666 1083 aa16.7■□□□□ 0.26
CMTM3-215ENST00000568477 B4GALT4O60513 344 aa16.69■□□□□ 0.26
CMTM3-215ENST00000568477 PLEKHA8P1O95397 391 aa16.69■□□□□ 0.26
CMTM3-215ENST00000568477 CYP2C18P33260 490 aa16.69■□□□□ 0.26
CMTM3-215ENST00000568477 ARHGAP1Q07960 439 aa16.69■□□□□ 0.26
CMTM3-215ENST00000568477 LY6KQ17RY6 165 aa16.69■□□□□ 0.26
CMTM3-215ENST00000568477 FCHSD1Q86WN1 690 aa16.69■□□□□ 0.26
CMTM3-215ENST00000568477 AFG1LQ8WV93 481 aa16.69■□□□□ 0.26
CMTM3-215ENST00000568477 NEK1Q96PY6 1258 aa16.69■□□□□ 0.26
CMTM3-215ENST00000568477 MRVI1Q9Y6F6 885 aa16.69■□□□□ 0.26
CMTM3-215ENST00000568477 SCN10AQ9Y5Y9 1956 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms