RNA–Protein interactions for RNA: ENST00000568423.5

SCAMP5-218, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 1,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-218ENST00000568423 GPR153Q6NV75 609 aa20.71■□□□□ 0.91
SCAMP5-218ENST00000568423 KLHDC9Q8NEP7 349 aa20.71■□□□□ 0.91
SCAMP5-218ENST00000568423 FGD4Q96M96 766 aa20.71■□□□□ 0.91
SCAMP5-218ENST00000568423 LARP6Q9BRS8 491 aaKnown RBP20.71■□□□□ 0.91
SCAMP5-218ENST00000568423 ADD3Q9UEY8 706 aaKnown RBP20.71■□□□□ 0.91
SCAMP5-218ENST00000568423 LAMA3Q16787 3333 aa20.71■□□□□ 0.91
SCAMP5-218ENST00000568423 SOWAHBA6NEL2 793 aa20.7■□□□□ 0.9
SCAMP5-218ENST00000568423 DCDC2CA8MYV0 355 aa20.7■□□□□ 0.9
SCAMP5-218ENST00000568423 NFIBO00712 420 aa20.7■□□□□ 0.9
SCAMP5-218ENST00000568423 NEK4P51957 841 aa20.7■□□□□ 0.9
SCAMP5-218ENST00000568423 USH1GQ495M9 461 aa20.7■□□□□ 0.9
SCAMP5-218ENST00000568423 GNASQ5JWF2 1037 aa20.7■□□□□ 0.9
SCAMP5-218ENST00000568423 FBXO11Q86XK2 927 aa20.7■□□□□ 0.9
SCAMP5-218ENST00000568423 CLEC4DQ8WXI8 215 aa20.7■□□□□ 0.9
SCAMP5-218ENST00000568423 MPHOSPH6Q99547 160 aaKnown RBP20.7■□□□□ 0.9
SCAMP5-218ENST00000568423 PDLIM7Q9NR12 457 aa20.7■□□□□ 0.9
SCAMP5-218ENST00000568423 MCM3APO60318 1980 aa20.7■□□□□ 0.9
SCAMP5-218ENST00000568423 PTPDC1A2A3K4 754 aa20.69■□□□□ 0.9
SCAMP5-218ENST00000568423 PQBP1O60828 265 aaKnown RBP20.69■□□□□ 0.9
SCAMP5-218ENST00000568423 CLTBP09497 229 aa20.69■□□□□ 0.9
SCAMP5-218ENST00000568423 CST5P28325 142 aaPredicted RBP20.69■□□□□ 0.9
SCAMP5-218ENST00000568423 GJA9P57773 515 aa20.69■□□□□ 0.9
SCAMP5-218ENST00000568423 PPP2R5BQ15173 497 aa20.69■□□□□ 0.9
SCAMP5-218ENST00000568423 ZNF274Q96GC6 653 aaPredicted RBP20.69■□□□□ 0.9
SCAMP5-218ENST00000568423 AP5M1Q9H0R1 490 aa20.69■□□□□ 0.9
SCAMP5-218ENST00000568423 TPCN1Q9ULQ1 816 aa20.69■□□□□ 0.9
SCAMP5-218ENST00000568423 ELP1O95163 1332 aa20.69■□□□□ 0.9
SCAMP5-218ENST00000568423 ABCB11O95342 1321 aa20.69■□□□□ 0.9
SCAMP5-218ENST00000568423 PNMA6FA0A0J9YX94 578 aa20.68■□□□□ 0.9
SCAMP5-218ENST00000568423 ADD1P35611 737 aaKnown RBP20.68■□□□□ 0.9
SCAMP5-218ENST00000568423 BAATQ14032 418 aaPredicted RBP20.68■□□□□ 0.9
SCAMP5-218ENST00000568423 ANKRD1Q15327 319 aa20.68■□□□□ 0.9
SCAMP5-218ENST00000568423 PIBF1Q8WXW3 757 aa20.68■□□□□ 0.9
SCAMP5-218ENST00000568423 BADQ92934 168 aa20.68■□□□□ 0.9
SCAMP5-218ENST00000568423 RRP36Q96EU6 259 aaKnown RBP20.68■□□□□ 0.9
SCAMP5-218ENST00000568423 AMNQ9BXJ7 453 aa20.68■□□□□ 0.9
SCAMP5-218ENST00000568423 NCOA5Q9HCD5 579 aaKnown RBP20.68■□□□□ 0.9
SCAMP5-218ENST00000568423 TMEM39AQ9NV64 488 aa20.68■□□□□ 0.9
SCAMP5-218ENST00000568423 MROH7Q68CQ1 1323 aa20.68■□□□□ 0.9
SCAMP5-218ENST00000568423 CCDC196A0A1B0GTZ2 297 aa20.67■□□□□ 0.9
SCAMP5-218ENST00000568423 OPLAHO14841 1288 aa20.67■□□□□ 0.9
SCAMP5-218ENST00000568423 ZEB2O60315 1214 aa20.67■□□□□ 0.9
SCAMP5-218ENST00000568423 LARGE1O95461 756 aa20.67■□□□□ 0.9
SCAMP5-218ENST00000568423 ASGR1P07306 291 aa20.67■□□□□ 0.9
SCAMP5-218ENST00000568423 RAG1P15918 1043 aa20.67■□□□□ 0.9
SCAMP5-218ENST00000568423 RABEP1Q15276 862 aa20.67■□□□□ 0.9
SCAMP5-218ENST00000568423 IQSEC1Q6DN90 963 aa20.67■□□□□ 0.9
SCAMP5-218ENST00000568423 EEPD1Q7L9B9 569 aa20.67■□□□□ 0.9
SCAMP5-218ENST00000568423 TOX2Q96NM4 488 aa20.67■□□□□ 0.9
SCAMP5-218ENST00000568423 UPF3AQ9H1J1 476 aaKnown RBP20.67■□□□□ 0.9
SCAMP5-218ENST00000568423 LOC102724159A0A0B4J2E5 919 aa20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 hCG_1642624A0A1W2PR95 340 aa20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 B4DLN1 442 aa20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 MRPL12P52815 198 aaKnown RBP20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 PWP2Q15269 919 aaKnown RBP20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 NTRK3Q16288 839 aa20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 CCSAPQ6IQ19 270 aaPredicted RBP20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 SLC30A10Q6XR72 485 aa20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 RNF207Q6ZRF8 634 aa20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 ANKRD33Q7Z3H0 272 aa20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 SH3RF1Q7Z6J0 888 aa20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 CCDC82Q8N4S0 544 aa20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 KATNBL1Q9H079 304 aa20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 VTA1Q9NP79 307 aa20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 SEC63Q9UGP8 760 aaKnown RBP20.66■□□□□ 0.9
SCAMP5-218ENST00000568423 TRIM43BA6NCK2 446 aa20.65■□□□□ 0.9
SCAMP5-218ENST00000568423 MYADML2A6NDP7 307 aa20.65■□□□□ 0.9
SCAMP5-218ENST00000568423 CALML3P27482 149 aa20.65■□□□□ 0.9
SCAMP5-218ENST00000568423 CCT2P78371 535 aaKnown RBP20.65■□□□□ 0.9
SCAMP5-218ENST00000568423 STK3Q13188 491 aa20.65■□□□□ 0.9
SCAMP5-218ENST00000568423 TLK2Q86UE8 772 aa20.65■□□□□ 0.9
SCAMP5-218ENST00000568423 DEFB123Q8N688 67 aa20.65■□□□□ 0.9
SCAMP5-218ENST00000568423 TRIM43Q96BQ3 446 aaPredicted RBP20.65■□□□□ 0.9
SCAMP5-218ENST00000568423 PCDHA1Q9Y5I3 950 aa20.65■□□□□ 0.9
SCAMP5-218ENST00000568423 ASTN1O14525 1302 aa20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 A0A0U1RQG5 324 aaPredicted RBP20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 DYNC1LI2O43237 492 aaPredicted RBP20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 ADCY6O43306 1168 aa20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 PFKFB2O60825 505 aa20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 CABYRO75952 493 aa20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 IFNAR1P17181 557 aa20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 ALDH5A1P51649 535 aaPredicted RBP20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 GHRHRQ02643 423 aa20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 FBXO16Q8IX29 292 aaPredicted RBP20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 MRPL11Q9Y3B7 192 aaKnown RBP20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 Q9Y3F1 56 aa20.64■□□□□ 0.89
SCAMP5-218ENST00000568423 KIAA0355O15063 1070 aa20.63■□□□□ 0.89
SCAMP5-218ENST00000568423 TLR3O15455 904 aaKnown RBP20.63■□□□□ 0.89
SCAMP5-218ENST00000568423 SCRN1Q12765 414 aa20.63■□□□□ 0.89
SCAMP5-218ENST00000568423 ME3Q16798 604 aa20.63■□□□□ 0.89
SCAMP5-218ENST00000568423 GNEQ9Y223 722 aaKnown RBP20.63■□□□□ 0.89
SCAMP5-218ENST00000568423 ARVCFO00192 962 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 SMPD1P17405 629 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 RPS6P62753 249 aaKnown RBP20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 NKX3-2P78367 333 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 IRX5P78411 483 aaPredicted RBP20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 BEX3Q00994 111 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 PDE4DQ08499 809 aa20.62■□□□□ 0.89
SCAMP5-218ENST00000568423 FAAP100Q0VG06 881 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms