RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 DOCK5Q9H7D0 1870 aa9.49□□□□□ -0.89
HDGFL3-205ENST00000568129 KAT6AQ92794 2004 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 EIF3JO75822 258 aaKnown RBP9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 PLEKHA8P1O95397 391 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 ASGR1P07306 291 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 IRX5P78411 483 aaPredicted RBP9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 HABP4Q5JVS0 413 aaKnown RBP9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 GNASQ5JWF2 1037 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 TLK2Q86UE8 772 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 VSIG10LQ86VR7 867 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 C7orf61Q8IZ16 206 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 SCFD2Q8WU76 684 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 NUP133Q8WUM0 1156 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 RMDN3Q96TC7 470 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 MYL10Q9BUA6 226 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 LRRC2Q9BYS8 371 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 WDR11Q9BZH6 1224 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 SPC25Q9HBM1 224 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 ZSWIM6Q9HCJ5 1215 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 RBM28Q9NW13 759 aaKnown RBP9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 DDX49Q9Y6V7 483 aaKnown RBP9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 WDR81Q562E7 1941 aa9.48□□□□□ -0.89
HDGFL3-205ENST00000568129 A6NJR5 290 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 MEIS2O14770 477 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 KIAA0355O15063 1070 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 DYNC1LI2O43237 492 aaPredicted RBP9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 DHX16O60231 1041 aaKnown RBP9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 CABYRO75952 493 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 RGS20O76081 388 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 CFBP00751 764 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 NR3C2P08235 984 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 C6orf222P0C671 652 aaPredicted RBP9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 TGFB3P10600 412 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 RPS6KB1P23443 525 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 PSMA5P28066 241 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 PDE4DQ08499 809 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 STXBP2Q15833 593 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 NFXL1Q6ZNB6 911 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 EEPD1Q7L9B9 569 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 EMID1Q96A84 441 aaPredicted RBP9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 RRP36Q96EU6 259 aaKnown RBP9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 PDCD2LQ9BRP1 358 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 RBM27Q9P2N5 1060 aaKnown RBP9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 GRIN2DO15399 1336 aa9.47□□□□□ -0.89
HDGFL3-205ENST00000568129 TRIM43BA6NCK2 446 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 GCOM1H8Y6P7 765 aaPredicted RBP9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 ARVCFO00192 962 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 ZBTB43O43298 467 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 KPNA6O60684 536 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 STAM2O75886 525 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 ARIH2O95376 493 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 CD4P01730 458 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 POLR2MP0CAP2 368 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 HOXD8P13378 290 aaPredicted RBP9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 CDC27P30260 824 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 ATN1P54259 1190 aaPredicted RBP9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 TLE2Q04725 743 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 FAAP100Q0VG06 881 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 TTLL4Q14679 1199 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 PGM5Q15124 567 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 FSCN1Q16658 493 aaKnown RBP9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 TRIM60Q495X7 471 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 XRRA1Q6P2D8 792 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 BLOC1S2Q6QNY1 142 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 SYNE3Q6ZMZ3 975 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 RUFY3Q7L099 469 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 HOMER1Q86YM7 354 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 FERMT2Q96AC1 680 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 TRIM43Q96BQ3 446 aaPredicted RBP9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 TCEANC2Q96MN5 208 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 GLT1D1Q96MS3 346 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 JAKMIP1Q96N16 626 aaKnown RBP9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 AP5M1Q9H0R1 490 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 ALDH8A1Q9H2A2 487 aaPredicted RBP9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 STARD7Q9NQZ5 370 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 PDLIM7Q9NR12 457 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 DDX41Q9UJV9 622 aaKnown RBP9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 MROH7Q68CQ1 1323 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 CNTNAP5Q8WYK1 1306 aa9.46□□□□□ -0.9
HDGFL3-205ENST00000568129 A0A0U1RQG5 324 aaPredicted RBP9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 hCG_1984214I3L0E3 225 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 ZEB2O60315 1214 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 TXNP10599 105 aaKnown RBP9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 CPA1P15085 419 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 RXRAP19793 462 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 PTGS1P23219 599 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 HOXA13P31271 388 aaPredicted RBP9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 ICAM3P32942 547 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 MAGEA10P43363 369 aaPredicted RBP9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 ANAPC15P60006 121 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 PURAQ00577 322 aaKnown RBP9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 BEX3Q00994 111 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 TOB2Q14106 344 aaPredicted RBP9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 NTRK3Q16288 839 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 RTN1Q16799 776 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 ARHGEF16Q5VV41 709 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 KCNV1Q6PIU1 500 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 CHRDL2Q6WN34 429 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 Q6ZUG5 572 aa9.45□□□□□ -0.9
HDGFL3-205ENST00000568129 MICU3Q86XE3 530 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms