RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 NEK8Q86SG6 692 aa16.57■□□□□ 0.24
COMMD4-221ENST00000567935 CUL5Q93034 780 aa16.57■□□□□ 0.24
COMMD4-221ENST00000567935 TRIM44Q96DX7 344 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-221ENST00000567935 TMEM39BQ9GZU3 492 aa16.57■□□□□ 0.24
COMMD4-221ENST00000567935 CSRNP2Q9H175 543 aa16.57■□□□□ 0.24
COMMD4-221ENST00000567935 UNC93B1Q9H1C4 597 aa16.57■□□□□ 0.24
COMMD4-221ENST00000567935 EYSQ5T1H1 3165 aa16.57■□□□□ 0.24
COMMD4-221ENST00000567935 RPTORQ8N122 1335 aa16.56■□□□□ 0.24
COMMD4-221ENST00000567935 BTBD19C9JJ37 291 aa16.56■□□□□ 0.24
COMMD4-221ENST00000567935 MCM7P33993 719 aa16.56■□□□□ 0.24
COMMD4-221ENST00000567935 PSMC4P43686 418 aa16.56■□□□□ 0.24
COMMD4-221ENST00000567935 RASA3Q14644 834 aa16.56■□□□□ 0.24
COMMD4-221ENST00000567935 SYDE2Q5VT97 1194 aa16.56■□□□□ 0.24
COMMD4-221ENST00000567935 TTBK2Q6IQ55 1244 aa16.56■□□□□ 0.24
COMMD4-221ENST00000567935 KCTD1Q719H9 257 aa16.56■□□□□ 0.24
COMMD4-221ENST00000567935 BPIFA3Q9BQP9 254 aa16.56■□□□□ 0.24
COMMD4-221ENST00000567935 BIN2Q9UBW5 565 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-221ENST00000567935 TUBE1Q9UJT0 475 aa16.56■□□□□ 0.24
COMMD4-221ENST00000567935 ZMYND8Q9ULU4 1186 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-221ENST00000567935 MYPNQ86TC9 1320 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 USP17L10C9JJH3 530 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 SGPL1O95470 568 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 SLURP2P0DP57 97 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 NLRP12P59046 1061 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 VGLL4Q14135 290 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 RRP1BQ14684 758 aaKnown RBP16.55■□□□□ 0.24
COMMD4-221ENST00000567935 CDC37Q16543 378 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-221ENST00000567935 INF2Q27J81 1249 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 DCAF15Q66K64 600 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 CDAN1Q8IWY9 1227 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 C4orf32Q8N8J7 132 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 AK8Q96MA6 479 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 GUCD1Q96NT3 240 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 AMNQ9BXJ7 453 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 CBX8Q9HC52 389 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 RAPGEFL1Q9UHV5 662 aa16.55■□□□□ 0.24
COMMD4-221ENST00000567935 GCFC2P16383 781 aaKnown RBP16.54■□□□□ 0.24
COMMD4-221ENST00000567935 SLC16A2P36021 539 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 UBXN2AP68543 259 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 QRICH1Q2TAL8 776 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 C17orf99Q6UX52 265 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 DTHD1Q6ZMT9 781 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 FAM160B2Q86V87 743 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 C7orf61Q8IZ16 206 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 TDHQ8IZJ6 230 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 TRIML1Q8N9V2 468 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 RASGRP4Q8TDF6 673 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 CHURC1Q8WUH1 139 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 DNAJC25Q9H1X3 360 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 VCPKMTQ9H867 229 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 CPA4Q9UI42 421 aa16.54■□□□□ 0.24
COMMD4-221ENST00000567935 VWA3AA6NCI4 1184 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 GOLGA6L19H0YKK7 550 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 WNT7AO00755 349 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 POLR2DO15514 142 aaKnown RBP16.53■□□□□ 0.24
COMMD4-221ENST00000567935 NEMFO60524 1076 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 SLFN14P0C7P3 912 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 CLK2P49760 499 aaKnown RBP16.53■□□□□ 0.24
COMMD4-221ENST00000567935 JAG1P78504 1218 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 GRIN1Q05586 938 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 AP3B2Q13367 1082 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 SHROOM1Q2M3G4 852 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-221ENST00000567935 LONRF3Q496Y0 759 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 IQUBQ8NA54 791 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 SYMPKQ92797 1274 aaKnown RBP16.53■□□□□ 0.24
COMMD4-221ENST00000567935 COA7Q96BR5 231 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 TEPSINQ96N21 525 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 PSTPIP2Q9H939 334 aa16.53■□□□□ 0.24
COMMD4-221ENST00000567935 A0A1W2PRG0 241 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 ADAMTS3O15072 1205 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 ACTN4O43707 911 aaKnown RBP16.52■□□□□ 0.24
COMMD4-221ENST00000567935 RAD21O60216 631 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 CTNND1O60716 968 aaKnown RBP16.52■□□□□ 0.24
COMMD4-221ENST00000567935 PPP1R11O60927 126 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-221ENST00000567935 SMC2O95347 1197 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 OR52Z1P0C646 297 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 STAT2P52630 851 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 PRKCZQ05513 592 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 IKQ13123 557 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-221ENST00000567935 POSTNQ15063 836 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 CT47A1Q5JQC4 288 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-221ENST00000567935 NT5DC1Q5TFE4 455 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 PPP4R3AQ6IN85 833 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 FBXO11Q86XK2 927 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 TBCKQ8TEA7 893 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 LPAR1Q92633 364 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 PAWRQ96IZ0 340 aaKnown RBP16.52■□□□□ 0.24
COMMD4-221ENST00000567935 DACH1Q9UI36 760 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 PCDHA1Q9Y5I3 950 aa16.52■□□□□ 0.24
COMMD4-221ENST00000567935 ATAD5Q96QE3 1844 aa16.52■□□□□ 0.23
COMMD4-221ENST00000567935 PHF20L1A8MW92 1017 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 BECN2A8MW95 431 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 TMEM232C9JQI7 657 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 FOSP01100 380 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-221ENST00000567935 CETPP11597 493 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 SYN1P17600 705 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 HOXD10P28358 340 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 MAGEA10P43363 369 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-221ENST00000567935 TPM4P67936 248 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 MAP3K9P80192 1104 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms