RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 TXNRD1Q16881 649 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 PMFBP1Q8TBY8 1022 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 ATG4CQ96DT6 458 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 ASIC4Q96FT7 647 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 KRTAP4-8Q9BYQ9 185 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 PDGFDQ9GZP0 370 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-217ENST00000567817 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.74□□□□□ -1.33
CAPN3-217ENST00000567817 DUSP15Q9H1R2 295 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-217ENST00000567817 PRDM7Q9NQW5 492 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 GPATCH2Q9NW75 528 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 ZNRF3Q9ULT6 936 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 LRRC37A3O60309 1634 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 ADGRF5Q8IZF2 1346 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 ZNF521Q96K83 1311 aa6.74□□□□□ -1.33
CAPN3-217ENST00000567817 ITSN1Q15811 1721 aa6.73□□□□□ -1.33
CAPN3-217ENST00000567817 E9PSI1 815 aa6.73□□□□□ -1.33
CAPN3-217ENST00000567817 TNFRSF10CO14798 259 aa6.73□□□□□ -1.33
CAPN3-217ENST00000567817 PAPLNO95428 1278 aa6.73□□□□□ -1.33
CAPN3-217ENST00000567817 HDLBPQ00341 1268 aaKnown RBP6.73□□□□□ -1.33
CAPN3-217ENST00000567817 RAD51AP2Q09MP3 1159 aa6.73□□□□□ -1.33
CAPN3-217ENST00000567817 NGDNQ8NEJ9 315 aaKnown RBP6.73□□□□□ -1.33
CAPN3-217ENST00000567817 FLAD1Q8NFF5 587 aa6.73□□□□□ -1.33
CAPN3-217ENST00000567817 VWCEQ96DN2 955 aa6.73□□□□□ -1.33
CAPN3-217ENST00000567817 SPATA32Q96LK8 384 aa6.73□□□□□ -1.33
CAPN3-217ENST00000567817 COL24A1Q17RW2 1714 aa6.73□□□□□ -1.33
CAPN3-217ENST00000567817 COL5A2P05997 1499 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-217ENST00000567817 TOPAZ1Q8N9V7 1692 aa6.72□□□□□ -1.33
CAPN3-217ENST00000567817 NME1P15531 152 aaKnown RBP6.72□□□□□ -1.33
CAPN3-217ENST00000567817 HMGB2P26583 209 aaKnown RBP6.72□□□□□ -1.33
CAPN3-217ENST00000567817 COL9A2Q14055 689 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-217ENST00000567817 CHRNA2Q15822 529 aa6.72□□□□□ -1.33
CAPN3-217ENST00000567817 GAB4Q2WGN9 574 aa6.72□□□□□ -1.33
CAPN3-217ENST00000567817 TSPYL5Q86VY4 417 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-217ENST00000567817 NT5DC4Q86YG4 428 aa6.72□□□□□ -1.33
CAPN3-217ENST00000567817 CCDC120Q96HB5 630 aa6.72□□□□□ -1.33
CAPN3-217ENST00000567817 FMNL2Q96PY5 1086 aa6.72□□□□□ -1.33
CAPN3-217ENST00000567817 PRAM1Q96QH2 718 aa6.72□□□□□ -1.33
CAPN3-217ENST00000567817 QSER1Q2KHR3 1735 aa6.72□□□□□ -1.33
CAPN3-217ENST00000567817 CGNL1Q0VF96 1302 aa6.72□□□□□ -1.33
CAPN3-217ENST00000567817 PAPPAQ13219 1627 aa6.72□□□□□ -1.33
CAPN3-217ENST00000567817 RBAK-RBAKDNI3L0D1 243 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 LRRN2O75325 713 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 ESR1P03372 595 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 TPP2P29144 1249 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-217ENST00000567817 POLR2BP30876 1174 aaKnown RBP6.71□□□□□ -1.34
CAPN3-217ENST00000567817 SLFN5Q08AF3 891 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 PAK2Q13177 524 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 TMEM132EQ6IEE7 984 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 CENPQQ7L2Z9 268 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-217ENST00000567817 JMYQ8N9B5 988 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 CFAP53Q96M91 514 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 IPO9Q96P70 1041 aaKnown RBP6.71□□□□□ -1.34
CAPN3-217ENST00000567817 ALPK1Q96QP1 1244 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 FERD3LQ96RJ6 166 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 ANTXR1Q9H6X2 564 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 POGKQ9P215 609 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 DUSP13Q9UII6 198 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 NOP58Q9Y2X3 529 aaKnown RBP6.71□□□□□ -1.34
CAPN3-217ENST00000567817 RNF114Q9Y508 228 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 USP19O94966 1318 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 EVC2Q86UK5 1308 aa6.71□□□□□ -1.34
CAPN3-217ENST00000567817 ANKRD36BQ8N2N9 1353 aa6.7□□□□□ -1.34
CAPN3-217ENST00000567817 ADGRB1O14514 1584 aa6.7□□□□□ -1.34
CAPN3-217ENST00000567817 AKAP12Q02952 1782 aa6.7□□□□□ -1.34
CAPN3-217ENST00000567817 CLEC3AO75596 197 aa6.7□□□□□ -1.34
CAPN3-217ENST00000567817 CT47B1P0C2W7 299 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-217ENST00000567817 ZC3H6P61129 1189 aaKnown RBP6.7□□□□□ -1.34
CAPN3-217ENST00000567817 NBPF12Q5TAG4 269 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-217ENST00000567817 INTS3Q68E01 1043 aaKnown RBP6.7□□□□□ -1.34
CAPN3-217ENST00000567817 CREG2Q8IUH2 290 aa6.7□□□□□ -1.34
CAPN3-217ENST00000567817 TRMT2AQ8IZ69 625 aaKnown RBP6.7□□□□□ -1.34
CAPN3-217ENST00000567817 TAB3Q8N5C8 712 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-217ENST00000567817 EXOC6Q8TAG9 804 aa6.7□□□□□ -1.34
CAPN3-217ENST00000567817 RASGRP4Q8TDF6 673 aa6.7□□□□□ -1.34
CAPN3-217ENST00000567817 CTNND2Q9UQB3 1225 aa6.7□□□□□ -1.34
CAPN3-217ENST00000567817 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-217ENST00000567817 TOMM70O94826 608 aa6.69□□□□□ -1.34
CAPN3-217ENST00000567817 GDNFP39905 211 aa6.69□□□□□ -1.34
CAPN3-217ENST00000567817 DNAJC5GQ8N7S2 189 aa6.69□□□□□ -1.34
CAPN3-217ENST00000567817 RBBP8NLQ8NC74 664 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-217ENST00000567817 ENOX1Q8TC92 643 aaKnown RBP6.69□□□□□ -1.34
CAPN3-217ENST00000567817 GPRASP2Q96D09 838 aa6.69□□□□□ -1.34
CAPN3-217ENST00000567817 TGIF2Q9GZN2 237 aa6.69□□□□□ -1.34
CAPN3-217ENST00000567817 ASCC2Q9H1I8 757 aaPredicted RBP6.69□□□□□ -1.34
CAPN3-217ENST00000567817 GOLGB1Q14789 3259 aaKnown RBP6.69□□□□□ -1.34
CAPN3-217ENST00000567817 NHSQ6T4R5 1651 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 WASH4PA8MWX3 477 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 GJA8P48165 433 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 CLEC16AQ2KHT3 1053 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 NBPF9Q3BBW0 867 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 MORC1Q86VD1 984 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 WDR63Q8IWG1 891 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 SYTL5Q8TDW5 730 aaPredicted RBP6.68□□□□□ -1.34
CAPN3-217ENST00000567817 FAM168AQ92567 244 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 SLC6A18Q96N87 628 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 TM9SF2Q99805 663 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 PNNQ9H307 717 aaKnown RBP6.68□□□□□ -1.34
CAPN3-217ENST00000567817 C19orf73Q9NVV2 129 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 SLAMF8Q9P0V8 285 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 TMEM59LQ9UK28 342 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms