RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 POLR2MP0CAP2 368 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 EIF2AK2P19525 551 aaKnown RBP19.83■□□□□ 0.77
COMMD4-220ENST00000567720 NAPAP54920 295 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 ACVR2BQ13705 512 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 IFFO2Q5TF58 517 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 ANO1Q5XXA6 986 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 USP17L6PQ6QN14 398 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 SAMD3Q8N6K7 520 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 NECAB1Q8N987 351 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 RMDN3Q96TC7 470 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 PXMP2Q9NR77 195 aa19.83■□□□□ 0.77
COMMD4-220ENST00000567720 MAP3K20Q9NYL2 800 aaKnown RBP19.83■□□□□ 0.77
COMMD4-220ENST00000567720 RBM27Q9P2N5 1060 aaKnown RBP19.83■□□□□ 0.77
COMMD4-220ENST00000567720 PIK3CDO00329 1044 aa19.82■□□□□ 0.76
COMMD4-220ENST00000567720 DTNBO60941 627 aa19.82■□□□□ 0.76
COMMD4-220ENST00000567720 CTDNEP1O95476 244 aa19.82■□□□□ 0.76
COMMD4-220ENST00000567720 UBE2SQ16763 222 aa19.82■□□□□ 0.76
COMMD4-220ENST00000567720 EEPD1Q7L9B9 569 aa19.82■□□□□ 0.76
COMMD4-220ENST00000567720 IL31RAQ8NI17 732 aa19.82■□□□□ 0.76
COMMD4-220ENST00000567720 STK36Q9NRP7 1315 aa19.81■□□□□ 0.76
COMMD4-220ENST00000567720 MSCO60682 206 aa19.81■□□□□ 0.76
COMMD4-220ENST00000567720 AKR1A1P14550 325 aa19.81■□□□□ 0.76
COMMD4-220ENST00000567720 FCHSD1Q86WN1 690 aa19.81■□□□□ 0.76
COMMD4-220ENST00000567720 NSUN6Q8TEA1 469 aaKnown RBP19.81■□□□□ 0.76
COMMD4-220ENST00000567720 PDCD2LQ9BRP1 358 aa19.81■□□□□ 0.76
COMMD4-220ENST00000567720 VTA1Q9NP79 307 aa19.81■□□□□ 0.76
COMMD4-220ENST00000567720 OGDHLQ9ULD0 1010 aa19.81■□□□□ 0.76
COMMD4-220ENST00000567720 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.8■□□□□ 0.76
COMMD4-220ENST00000567720 CD2BP2O95400 341 aaKnown RBP19.8■□□□□ 0.76
COMMD4-220ENST00000567720 AKAP17AQ02040 695 aaKnown RBP19.8■□□□□ 0.76
COMMD4-220ENST00000567720 PDE4DQ08499 809 aa19.8■□□□□ 0.76
COMMD4-220ENST00000567720 CCDC144BQ3MJ40 725 aa19.8■□□□□ 0.76
COMMD4-220ENST00000567720 ARHGEF16Q5VV41 709 aa19.8■□□□□ 0.76
COMMD4-220ENST00000567720 TAPT1Q6NXT6 567 aa19.8■□□□□ 0.76
COMMD4-220ENST00000567720 CPLX2Q6PUV4 134 aaKnown RBP19.8■□□□□ 0.76
COMMD4-220ENST00000567720 TRIM22Q8IYM9 498 aa19.8■□□□□ 0.76
COMMD4-220ENST00000567720 PSTPIP2Q9H939 334 aa19.8■□□□□ 0.76
COMMD4-220ENST00000567720 PDGFCQ9NRA1 345 aa19.8■□□□□ 0.76
COMMD4-220ENST00000567720 PTGS1P23219 599 aa19.79■□□□□ 0.76
COMMD4-220ENST00000567720 ADCYAP1R1P41586 468 aa19.79■□□□□ 0.76
COMMD4-220ENST00000567720 MNX1P50219 401 aaPredicted RBP19.79■□□□□ 0.76
COMMD4-220ENST00000567720 ADCY7P51828 1080 aa19.79■□□□□ 0.76
COMMD4-220ENST00000567720 SSRP1Q08945 709 aaKnown RBP19.79■□□□□ 0.76
COMMD4-220ENST00000567720 PGM5Q15124 567 aa19.79■□□□□ 0.76
COMMD4-220ENST00000567720 UBE2Q1Q7Z7E8 422 aa19.79■□□□□ 0.76
COMMD4-220ENST00000567720 SMARCC2Q8TAQ2 1214 aa19.79■□□□□ 0.76
COMMD4-220ENST00000567720 CUL5Q93034 780 aa19.79■□□□□ 0.76
COMMD4-220ENST00000567720 AIFM3Q96NN9 605 aa19.79■□□□□ 0.76
COMMD4-220ENST00000567720 MPHOSPH6Q99547 160 aaKnown RBP19.79■□□□□ 0.76
COMMD4-220ENST00000567720 RIC8AQ9NPQ8 531 aa19.79■□□□□ 0.76
COMMD4-220ENST00000567720 VPS54Q9P1Q0 977 aa19.79■□□□□ 0.76
COMMD4-220ENST00000567720 LIMCH1Q9UPQ0 1083 aa19.79■□□□□ 0.76
COMMD4-220ENST00000567720 SYNRGQ9UMZ2 1314 aa19.78■□□□□ 0.76
COMMD4-220ENST00000567720 ESYT2A0FGR8 921 aa19.78■□□□□ 0.76
COMMD4-220ENST00000567720 ADAMTS3O15072 1205 aa19.78■□□□□ 0.76
COMMD4-220ENST00000567720 CDKL5O76039 1030 aa19.78■□□□□ 0.76
COMMD4-220ENST00000567720 DEXIO95424 95 aa19.78■□□□□ 0.76
COMMD4-220ENST00000567720 TMEM63BQ5T3F8 832 aa19.78■□□□□ 0.76
COMMD4-220ENST00000567720 NSUN7Q8NE18 718 aaKnown RBP19.78■□□□□ 0.76
COMMD4-220ENST00000567720 DIS3LQ8TF46 1054 aaKnown RBP19.78■□□□□ 0.76
COMMD4-220ENST00000567720 IWS1Q96ST2 819 aa19.78■□□□□ 0.76
COMMD4-220ENST00000567720 FAM184BQ9ULE4 1060 aa19.78■□□□□ 0.76
COMMD4-220ENST00000567720 PDE4DIPQ5VU43 2346 aa19.77■□□□□ 0.76
COMMD4-220ENST00000567720 SMCO2A6NFE2 343 aa19.77■□□□□ 0.76
COMMD4-220ENST00000567720 FARP2O94887 1054 aaPredicted RBP19.77■□□□□ 0.76
COMMD4-220ENST00000567720 TFRCP02786 760 aaKnown RBP19.77■□□□□ 0.76
COMMD4-220ENST00000567720 NR3C2P08235 984 aa19.77■□□□□ 0.76
COMMD4-220ENST00000567720 RARBP10826 455 aa19.77■□□□□ 0.76
COMMD4-220ENST00000567720 RGS19P49795 217 aa19.77■□□□□ 0.76
COMMD4-220ENST00000567720 ZMYND12Q9H0C1 365 aa19.77■□□□□ 0.76
COMMD4-220ENST00000567720 XPNPEP3Q9NQH7 507 aa19.77■□□□□ 0.76
COMMD4-220ENST00000567720 RBM47A0AV96 593 aaKnown RBP19.76■□□□□ 0.75
COMMD4-220ENST00000567720 B4DLN1 442 aa19.76■□□□□ 0.75
COMMD4-220ENST00000567720 ST18O60284 1047 aa19.76■□□□□ 0.75
COMMD4-220ENST00000567720 JAK2O60674 1132 aa19.76■□□□□ 0.75
COMMD4-220ENST00000567720 ADAMTS4O75173 837 aa19.76■□□□□ 0.75
COMMD4-220ENST00000567720 CLK2P49760 499 aaKnown RBP19.76■□□□□ 0.75
COMMD4-220ENST00000567720 MRPL12P52815 198 aaKnown RBP19.76■□□□□ 0.75
COMMD4-220ENST00000567720 GJC2Q5T442 439 aaPredicted RBP19.76■□□□□ 0.75
COMMD4-220ENST00000567720 CCDC83Q8IWF9 413 aa19.76■□□□□ 0.75
COMMD4-220ENST00000567720 ANKLE1Q8NAG6 615 aa19.76■□□□□ 0.75
COMMD4-220ENST00000567720 CCDC148Q8NFR7 591 aa19.76■□□□□ 0.75
COMMD4-220ENST00000567720 CCDC12Q8WUD4 166 aaPredicted RBP19.76■□□□□ 0.75
COMMD4-220ENST00000567720 PGBD1Q96JS3 809 aa19.76■□□□□ 0.75
COMMD4-220ENST00000567720 DUSP11O75319 330 aaKnown RBP19.75■□□□□ 0.75
COMMD4-220ENST00000567720 RGS20O76081 388 aa19.75■□□□□ 0.75
COMMD4-220ENST00000567720 ARIH2O95376 493 aa19.75■□□□□ 0.75
COMMD4-220ENST00000567720 PGK1P00558 417 aa19.75■□□□□ 0.75
COMMD4-220ENST00000567720 MYCLP12524 364 aaPredicted RBP19.75■□□□□ 0.75
COMMD4-220ENST00000567720 FDPSP14324 419 aaKnown RBP19.75■□□□□ 0.75
COMMD4-220ENST00000567720 SMPD1P17405 629 aa19.75■□□□□ 0.75
COMMD4-220ENST00000567720 CCND2P30279 289 aa19.75■□□□□ 0.75
COMMD4-220ENST00000567720 IRX5P78411 483 aaPredicted RBP19.75■□□□□ 0.75
COMMD4-220ENST00000567720 TNFAIP2Q03169 654 aa19.75■□□□□ 0.75
COMMD4-220ENST00000567720 STXBP2Q15833 593 aa19.75■□□□□ 0.75
COMMD4-220ENST00000567720 TMEM260Q9NX78 707 aa19.75■□□□□ 0.75
COMMD4-220ENST00000567720 GNEQ9Y223 722 aaKnown RBP19.75■□□□□ 0.75
COMMD4-220ENST00000567720 MYADML2A6NDP7 307 aa19.74■□□□□ 0.75
COMMD4-220ENST00000567720 SPDYE3A6NKU9 549 aa19.74■□□□□ 0.75
COMMD4-220ENST00000567720 MRPS9P82933 396 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms