RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 SENP2Q9HC62 589 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 MAP3K20Q9NYL2 800 aaKnown RBP8.04□□□□□ -1.12
SF3B3-209ENST00000567635 PCDHA1Q9Y5I3 950 aa8.04□□□□□ -1.12
SF3B3-209ENST00000567635 MROH7Q68CQ1 1323 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 SCN10AQ9Y5Y9 1956 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 PNMA6FA0A0J9YX94 578 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 NKRFO15226 690 aaKnown RBP eCLIP8.03□□□□□ -1.12
SF3B3-209ENST00000567635 TLR3O15455 904 aaKnown RBP8.03□□□□□ -1.12
SF3B3-209ENST00000567635 PRC1O43663 620 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 CFBP00751 764 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 RAG1P15918 1043 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 PTGS1P23219 599 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 ITGA7Q13683 1181 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 STXBP2Q15833 593 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 BRDTQ58F21 947 aaPredicted RBP8.03□□□□□ -1.12
SF3B3-209ENST00000567635 RNF20Q5VTR2 975 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 ARHGEF16Q5VV41 709 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 CREB3L3Q68CJ9 461 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 GPR153Q6NV75 609 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 NFXL1Q6ZNB6 911 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 SAMD3Q8N6K7 520 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 SLC43A3Q8NBI5 491 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 SCFD2Q8WU76 684 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 LRCH3Q96II8 777 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 TMEM87BQ96K49 555 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 RMDN3Q96TC7 470 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 SEZ6LQ9BYH1 1024 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 LY9Q9HBG7 655 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 ANO2Q9NQ90 1003 aa8.03□□□□□ -1.12
SF3B3-209ENST00000567635 CCDC69A6NI79 296 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 OPLAHO14841 1288 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 CYTH3O43739 400 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 KPNA6O60684 536 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 PPP1R11O60927 126 aaPredicted RBP8.02□□□□□ -1.13
SF3B3-209ENST00000567635 EIF3JO75822 258 aaKnown RBP8.02□□□□□ -1.13
SF3B3-209ENST00000567635 TIMP1P01033 207 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 CALM1P0DP23 149 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 CALM2P0DP24 149 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 CALM3P0DP25 149 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 TXNP10599 105 aaKnown RBP8.02□□□□□ -1.13
SF3B3-209ENST00000567635 ITGB8P26012 769 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 SMARCA1P28370 1054 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 KIF5BP33176 963 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 CPT1AP50416 773 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 HSD17B4P51659 736 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 FPGSQ05932 587 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 TTLL4Q14679 1199 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 PPP2R5BQ15173 497 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 SHHQ15465 462 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 SLC35G1Q2M3R5 365 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 ZNF654Q8IZM8 581 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 OR6J1Q8NGC5 347 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 CTCFLQ8NI51 663 aaPredicted RBP8.02□□□□□ -1.13
SF3B3-209ENST00000567635 PIGSQ96S52 555 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 LZTS2Q9BRK4 669 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 GPHNQ9NQX3 736 aaPredicted RBP8.02□□□□□ -1.13
SF3B3-209ENST00000567635 POLR3EQ9NVU0 708 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 COL20A1Q9P218 1284 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 DOCK5Q9H7D0 1870 aa8.02□□□□□ -1.13
SF3B3-209ENST00000567635 A6NJR5 290 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 GCOM1H8Y6P7 765 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-209ENST00000567635 SH2B2O14492 632 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-209ENST00000567635 CDC45O75419 566 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 DDAH1O94760 285 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 CD4P01730 458 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 NEFLP07196 543 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 NR3C2P08235 984 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 MYL3P08590 195 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 POLR2MP0CAP2 368 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 EIF2AK2P19525 551 aaKnown RBP8.01□□□□□ -1.13
SF3B3-209ENST00000567635 LIFRP42702 1097 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 GNAQP50148 359 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 PSMC6P62333 389 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 GHRHRQ02643 423 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 TSGA10IPQ3SY00 556 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 MFSD5Q6N075 450 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 CCDC62Q6P9F0 684 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 SEPT14Q6ZU15 432 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 HOMER1Q86YM7 354 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 FAM126BQ8IXS8 530 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 PIBF1Q8WXW3 757 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 COPS5Q92905 334 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 RRP36Q96EU6 259 aaKnown RBP8.01□□□□□ -1.13
SF3B3-209ENST00000567635 MTG1Q9BT17 334 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-209ENST00000567635 SPZ1Q9BXG8 430 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 PXMP2Q9NR77 195 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 TBX21Q9UL17 535 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 GRIN2DO15399 1336 aa8.01□□□□□ -1.13
SF3B3-209ENST00000567635 SCN5AQ14524 2016 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 GH1P01241 217 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 MYCLP12524 364 aaPredicted RBP8□□□□□ -1.13
SF3B3-209ENST00000567635 HOXA13P31271 388 aaPredicted RBP8□□□□□ -1.13
SF3B3-209ENST00000567635 PURAQ00577 322 aaKnown RBP8□□□□□ -1.13
SF3B3-209ENST00000567635 COL9A3Q14050 684 aaPredicted RBP8□□□□□ -1.13
SF3B3-209ENST00000567635 LY6KQ17RY6 165 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 C9orf50Q5SZB4 431 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 SYNE3Q6ZMZ3 975 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 DHX32Q7L7V1 743 aaKnown RBP8□□□□□ -1.13
SF3B3-209ENST00000567635 VSIG10LQ86VR7 867 aa8□□□□□ -1.13
SF3B3-209ENST00000567635 FCHSD1Q86WN1 690 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms