RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 SAMD3Q8N6K7 520 aa19.24■□□□□ 0.67
PKD1-233ENST00000567355 SCFD2Q8WU76 684 aa19.24■□□□□ 0.67
PKD1-233ENST00000567355 LBHD1Q9BQE6 289 aaPredicted RBP19.24■□□□□ 0.67
PKD1-233ENST00000567355 GRIN2DO15399 1336 aa19.24■□□□□ 0.67
PKD1-233ENST00000567355 MROH7Q68CQ1 1323 aa19.24■□□□□ 0.67
PKD1-233ENST00000567355 BAZ2BQ9UIF8 2168 aaKnown RBP19.23■□□□□ 0.67
PKD1-233ENST00000567355 NKRFO15226 690 aaKnown RBP eCLIP19.23■□□□□ 0.67
PKD1-233ENST00000567355 CCDC62Q6P9F0 684 aa19.23■□□□□ 0.67
PKD1-233ENST00000567355 CXCL17Q6UXB2 119 aa19.23■□□□□ 0.67
PKD1-233ENST00000567355 HOMER1Q86YM7 354 aa19.23■□□□□ 0.67
PKD1-233ENST00000567355 FAM126BQ8IXS8 530 aa19.23■□□□□ 0.67
PKD1-233ENST00000567355 BADQ92934 168 aa19.23■□□□□ 0.67
PKD1-233ENST00000567355 RMDN3Q96TC7 470 aa19.23■□□□□ 0.67
PKD1-233ENST00000567355 MYL10Q9BUA6 226 aa19.23■□□□□ 0.67
PKD1-233ENST00000567355 SPZ1Q9BXG8 430 aa19.23■□□□□ 0.67
PKD1-233ENST00000567355 TBX21Q9UL17 535 aa19.23■□□□□ 0.67
PKD1-233ENST00000567355 KIAA1217Q5T5P2 1943 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 DCDC2CA8MYV0 355 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 ZEB2O60315 1214 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 ARIH2O95376 493 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 CFBP00751 764 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 CD4P01730 458 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 EXOSC10Q01780 885 aaKnown RBP19.22■□□□□ 0.67
PKD1-233ENST00000567355 TRAF1Q13077 416 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 RNF20Q5VTR2 975 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 SGMS1Q86VZ5 419 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 RASEFQ8IZ41 740 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 KCNB2Q92953 911 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 LRCH3Q96II8 777 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 PXMP2Q9NR77 195 aa19.22■□□□□ 0.67
PKD1-233ENST00000567355 PPP2R5BQ15173 497 aa19.21■□□□□ 0.67
PKD1-233ENST00000567355 GPR153Q6NV75 609 aa19.21■□□□□ 0.67
PKD1-233ENST00000567355 CTCFLQ8NI51 663 aaPredicted RBP19.21■□□□□ 0.67
PKD1-233ENST00000567355 SEZ6LQ9BYH1 1024 aa19.21■□□□□ 0.67
PKD1-233ENST00000567355 TMEM39AQ9NV64 488 aa19.21■□□□□ 0.67
PKD1-233ENST00000567355 A6NJR5 290 aa19.2■□□□□ 0.66
PKD1-233ENST00000567355 TXNP10599 105 aaKnown RBP19.2■□□□□ 0.66
PKD1-233ENST00000567355 EIF2AK2P19525 551 aaKnown RBP19.2■□□□□ 0.66
PKD1-233ENST00000567355 KIF5BP33176 963 aa19.2■□□□□ 0.66
PKD1-233ENST00000567355 CPT1AP50416 773 aa19.2■□□□□ 0.66
PKD1-233ENST00000567355 PURAQ00577 322 aaKnown RBP19.2■□□□□ 0.66
PKD1-233ENST00000567355 ITGA7Q13683 1181 aa19.2■□□□□ 0.66
PKD1-233ENST00000567355 TTLL4Q14679 1199 aa19.2■□□□□ 0.66
PKD1-233ENST00000567355 STXBP2Q15833 593 aa19.2■□□□□ 0.66
PKD1-233ENST00000567355 ADCK5Q3MIX3 580 aa19.2■□□□□ 0.66
PKD1-233ENST00000567355 ARHGEF16Q5VV41 709 aa19.2■□□□□ 0.66
PKD1-233ENST00000567355 SRBD1Q8N5C6 995 aaKnown RBP19.2■□□□□ 0.66
PKD1-233ENST00000567355 COPS5Q92905 334 aa19.2■□□□□ 0.66
PKD1-233ENST00000567355 NEK1Q96PY6 1258 aa19.2■□□□□ 0.66
PKD1-233ENST00000567355 LZTS2Q9BRK4 669 aa19.2■□□□□ 0.66
PKD1-233ENST00000567355 LRRC2Q9BYS8 371 aa19.2■□□□□ 0.66
PKD1-233ENST00000567355 CCDC69A6NI79 296 aa19.19■□□□□ 0.66
PKD1-233ENST00000567355 EIF3JO75822 258 aaKnown RBP19.19■□□□□ 0.66
PKD1-233ENST00000567355 PLEKHA8P1O95397 391 aa19.19■□□□□ 0.66
PKD1-233ENST00000567355 TIMP1P01033 207 aa19.19■□□□□ 0.66
PKD1-233ENST00000567355 NR3C2P08235 984 aa19.19■□□□□ 0.66
PKD1-233ENST00000567355 CALM1P0DP23 149 aa19.19■□□□□ 0.66
PKD1-233ENST00000567355 CALM2P0DP24 149 aa19.19■□□□□ 0.66
PKD1-233ENST00000567355 CALM3P0DP25 149 aa19.19■□□□□ 0.66
PKD1-233ENST00000567355 OR6J1Q8NGC5 347 aa19.19■□□□□ 0.66
PKD1-233ENST00000567355 VTI1AQ96AJ9 217 aa19.19■□□□□ 0.66
PKD1-233ENST00000567355 PDCD2LQ9BRP1 358 aa19.19■□□□□ 0.66
PKD1-233ENST00000567355 POLR3EQ9NVU0 708 aa19.19■□□□□ 0.66
PKD1-233ENST00000567355 GCOM1H8Y6P7 765 aaPredicted RBP19.18■□□□□ 0.66
PKD1-233ENST00000567355 RGS20O76081 388 aa19.18■□□□□ 0.66
PKD1-233ENST00000567355 POLR2MP0CAP2 368 aa19.18■□□□□ 0.66
PKD1-233ENST00000567355 RAG1P15918 1043 aa19.18■□□□□ 0.66
PKD1-233ENST00000567355 HOXA13P31271 388 aaPredicted RBP19.18■□□□□ 0.66
PKD1-233ENST00000567355 GNAQP50148 359 aa19.18■□□□□ 0.66
PKD1-233ENST00000567355 EPHB4P54760 987 aa19.18■□□□□ 0.66
PKD1-233ENST00000567355 C9orf50Q5SZB4 431 aa19.18■□□□□ 0.66
PKD1-233ENST00000567355 NFXL1Q6ZNB6 911 aa19.18■□□□□ 0.66
PKD1-233ENST00000567355 DHX32Q7L7V1 743 aaKnown RBP19.18■□□□□ 0.66
PKD1-233ENST00000567355 VSIG10LQ86VR7 867 aa19.18■□□□□ 0.66
PKD1-233ENST00000567355 SLC12A7Q9Y666 1083 aa19.18■□□□□ 0.66
PKD1-233ENST00000567355 SCN10AQ9Y5Y9 1956 aa19.18■□□□□ 0.66
PKD1-233ENST00000567355 FRMPD4Q14CM0 1322 aa19.18■□□□□ 0.66
PKD1-233ENST00000567355 COL6A3P12111 3177 aa19.18■□□□□ 0.66
PKD1-233ENST00000567355 RXRAP19793 462 aa19.17■□□□□ 0.66
PKD1-233ENST00000567355 PSMC6P62333 389 aa19.17■□□□□ 0.66
PKD1-233ENST00000567355 ARHGAP1Q07960 439 aa19.17■□□□□ 0.66
PKD1-233ENST00000567355 KRT32Q14532 448 aa19.17■□□□□ 0.66
PKD1-233ENST00000567355 PGM5Q15124 567 aa19.17■□□□□ 0.66
PKD1-233ENST00000567355 SHHQ15465 462 aa19.17■□□□□ 0.66
PKD1-233ENST00000567355 FANCBQ8NB91 859 aa19.17■□□□□ 0.66
PKD1-233ENST00000567355 RRP36Q96EU6 259 aaKnown RBP19.17■□□□□ 0.66
PKD1-233ENST00000567355 DDX41Q9UJV9 622 aaKnown RBP19.17■□□□□ 0.66
PKD1-233ENST00000567355 TLR3O15455 904 aaKnown RBP19.16■□□□□ 0.66
PKD1-233ENST00000567355 HSPA4P34932 840 aa19.16■□□□□ 0.66
PKD1-233ENST00000567355 LY6KQ17RY6 165 aa19.16■□□□□ 0.66
PKD1-233ENST00000567355 MFSD5Q6N075 450 aa19.16■□□□□ 0.66
PKD1-233ENST00000567355 SEPT14Q6ZU15 432 aa19.16■□□□□ 0.66
PKD1-233ENST00000567355 TMTC3Q6ZXV5 915 aa19.16■□□□□ 0.66
PKD1-233ENST00000567355 CMTR1Q8N1G2 835 aaKnown RBP19.16■□□□□ 0.66
PKD1-233ENST00000567355 IL31RAQ8NI17 732 aa19.16■□□□□ 0.66
PKD1-233ENST00000567355 EMID1Q96A84 441 aaPredicted RBP19.16■□□□□ 0.66
PKD1-233ENST00000567355 MTG1Q9BT17 334 aaPredicted RBP19.16■□□□□ 0.66
PKD1-233ENST00000567355 PIK3CDO00329 1044 aa19.15■□□□□ 0.66
PKD1-233ENST00000567355 KPNA6O60684 536 aa19.15■□□□□ 0.66
PKD1-233ENST00000567355 GH1P01241 217 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms