RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 RAB34Q9BZG1 259 aa20.94■□□□□ 0.94
MSLN-207ENST00000566549 MYH8P13535 1937 aa20.94■□□□□ 0.94
MSLN-207ENST00000566549 TAL1P17542 331 aaPredicted RBP20.93■□□□□ 0.94
MSLN-207ENST00000566549 CDC37Q16543 378 aaPredicted RBP20.93■□□□□ 0.94
MSLN-207ENST00000566549 TUBGCP2Q9BSJ2 902 aa20.93■□□□□ 0.94
MSLN-207ENST00000566549 ABL1P00519 1130 aa20.93■□□□□ 0.94
MSLN-207ENST00000566549 KLK7P49862 253 aa20.93■□□□□ 0.94
MSLN-207ENST00000566549 IKQ13123 557 aaPredicted RBP20.93■□□□□ 0.94
MSLN-207ENST00000566549 ARHGAP29Q52LW3 1261 aa20.93■□□□□ 0.94
MSLN-207ENST00000566549 CNNM4Q6P4Q7 775 aa20.93■□□□□ 0.94
MSLN-207ENST00000566549 CNOT6LQ96LI5 555 aaKnown RBP20.93■□□□□ 0.94
MSLN-207ENST00000566549 CHP1Q99653 195 aa20.93■□□□□ 0.94
MSLN-207ENST00000566549 KANSL2Q9H9L4 492 aa20.93■□□□□ 0.94
MSLN-207ENST00000566549 PPP4R3AQ6IN85 833 aa20.92■□□□□ 0.94
MSLN-207ENST00000566549 SIAH1Q8IUQ4 282 aa20.92■□□□□ 0.94
MSLN-207ENST00000566549 MTMR8Q96EF0 704 aa20.92■□□□□ 0.94
MSLN-207ENST00000566549 SLF1Q9BQI6 1058 aa20.92■□□□□ 0.94
MSLN-207ENST00000566549 IDI2Q9BXS1 227 aa20.92■□□□□ 0.94
MSLN-207ENST00000566549 MTIF2P46199 727 aaKnown RBP20.92■□□□□ 0.94
MSLN-207ENST00000566549 TRIM14Q14142 442 aa20.92■□□□□ 0.94
MSLN-207ENST00000566549 STYK1Q6J9G0 422 aa20.92■□□□□ 0.94
MSLN-207ENST00000566549 TMTC1Q8IUR5 882 aa20.92■□□□□ 0.94
MSLN-207ENST00000566549 ZNF507Q8TCN5 953 aa20.92■□□□□ 0.94
MSLN-207ENST00000566549 RAD54LQ92698 747 aa20.92■□□□□ 0.94
MSLN-207ENST00000566549 SEMA6BQ9H3T3 888 aa20.92■□□□□ 0.94
MSLN-207ENST00000566549 BICDL2A1A5D9 508 aa20.91■□□□□ 0.94
MSLN-207ENST00000566549 SSBP05455 408 aaKnown RBP eCLIP20.91■□□□□ 0.94
MSLN-207ENST00000566549 ERCC3P19447 782 aa20.91■□□□□ 0.94
MSLN-207ENST00000566549 USH1GQ495M9 461 aa20.91■□□□□ 0.94
MSLN-207ENST00000566549 CYP26C1Q6V0L0 522 aa20.91■□□□□ 0.94
MSLN-207ENST00000566549 UBXN4Q92575 508 aa20.91■□□□□ 0.94
MSLN-207ENST00000566549 JAG1P78504 1218 aa20.9■□□□□ 0.94
MSLN-207ENST00000566549 PDIA5Q14554 519 aa20.9■□□□□ 0.94
MSLN-207ENST00000566549 GLIS3Q8NEA6 775 aa20.9■□□□□ 0.94
MSLN-207ENST00000566549 EPC1Q9H2F5 836 aa20.9■□□□□ 0.94
MSLN-207ENST00000566549 PRDM10Q9NQV6 1147 aa20.9■□□□□ 0.94
MSLN-207ENST00000566549 STK17AQ9UEE5 414 aa20.9■□□□□ 0.94
MSLN-207ENST00000566549 ABCB5Q2M3G0 1257 aa20.9■□□□□ 0.94
MSLN-207ENST00000566549 DDX12PQ92771 950 aa20.9■□□□□ 0.94
MSLN-207ENST00000566549 PCMTD1Q96MG8 357 aaPredicted RBP20.9■□□□□ 0.94
MSLN-207ENST00000566549 NYAP2Q9P242 653 aa20.9■□□□□ 0.94
MSLN-207ENST00000566549 SERPINA10Q9UK55 444 aa20.9■□□□□ 0.94
MSLN-207ENST00000566549 SCN9AQ15858 1988 aa20.9■□□□□ 0.94
MSLN-207ENST00000566549 F5H6K3 240 aa20.89■□□□□ 0.94
MSLN-207ENST00000566549 KIF5CO60282 957 aa20.89■□□□□ 0.94
MSLN-207ENST00000566549 FECHP22830 423 aa20.89■□□□□ 0.94
MSLN-207ENST00000566549 MAP3K9P80192 1104 aa20.89■□□□□ 0.94
MSLN-207ENST00000566549 KLRC3Q07444 240 aa20.89■□□□□ 0.94
MSLN-207ENST00000566549 LRRC41Q15345 812 aa20.89■□□□□ 0.94
MSLN-207ENST00000566549 ZNF569Q5MCW4 686 aa20.89■□□□□ 0.94
MSLN-207ENST00000566549 UNC13DQ70J99 1090 aa20.89■□□□□ 0.94
MSLN-207ENST00000566549 PRMT6Q96LA8 375 aaPredicted RBP20.89■□□□□ 0.94
MSLN-207ENST00000566549 PCDHA12Q9UN75 941 aa20.89■□□□□ 0.94
MSLN-207ENST00000566549 LUC7L2Q9Y383 392 aaKnown RBP20.89■□□□□ 0.94
MSLN-207ENST00000566549 MRFAP1Q9Y605 127 aa20.89■□□□□ 0.94
MSLN-207ENST00000566549 SLX4Q8IY92 1834 aa20.89■□□□□ 0.93
MSLN-207ENST00000566549 TADA3O75528 432 aa20.89■□□□□ 0.93
MSLN-207ENST00000566549 GH2P01242 217 aa20.89■□□□□ 0.93
MSLN-207ENST00000566549 TBC1D8BQ0IIM8 1120 aa20.89■□□□□ 0.93
MSLN-207ENST00000566549 ZNF772Q68DY9 489 aaPredicted RBP20.89■□□□□ 0.93
MSLN-207ENST00000566549 TATDN1Q6P1N9 297 aa20.89■□□□□ 0.93
MSLN-207ENST00000566549 SPICE1Q8N0Z3 855 aa20.89■□□□□ 0.93
MSLN-207ENST00000566549 NOC3LQ8WTT2 800 aaKnown RBP20.89■□□□□ 0.93
MSLN-207ENST00000566549 DCAF4Q8WV16 495 aa20.89■□□□□ 0.93
MSLN-207ENST00000566549 MKL1Q969V6 931 aa20.89■□□□□ 0.93
MSLN-207ENST00000566549 NOC4LQ9BVI4 516 aaKnown RBP20.89■□□□□ 0.93
MSLN-207ENST00000566549 ATF5Q9Y2D1 282 aaPredicted RBP20.89■□□□□ 0.93
MSLN-207ENST00000566549 PPIP5K2O43314 1243 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 C21orf2O43822 256 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 TRIM21P19474 475 aaKnown RBP20.88■□□□□ 0.93
MSLN-207ENST00000566549 PPP2R3AQ06190 1150 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 SEMA3FQ13275 785 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 ZSWIM4Q9H7M6 989 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 AGPAT5Q9NUQ2 364 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 C10orf71Q711Q0 1435 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 A0A1W2PQC6 194 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 YDJCA8MPS7 323 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 NDUFB10O96000 172 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 STAT3P40763 770 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 DNM2P50570 870 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 TMEM119Q4V9L6 283 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 TMEM179Q6ZVK1 233 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 MRIQ9BWK5 157 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 ANO3Q9BYT9 981 aa20.88■□□□□ 0.93
MSLN-207ENST00000566549 MYH4Q9Y623 1939 aa20.87■□□□□ 0.93
MSLN-207ENST00000566549 HDLBPQ00341 1268 aaKnown RBP20.87■□□□□ 0.93
MSLN-207ENST00000566549 RRP1BQ14684 758 aaKnown RBP20.87■□□□□ 0.93
MSLN-207ENST00000566549 OR8K1Q8NGG5 319 aa20.87■□□□□ 0.93
MSLN-207ENST00000566549 CNKSR1Q969H4 720 aa20.87■□□□□ 0.93
MSLN-207ENST00000566549 CSRNP1Q96S65 589 aa20.87■□□□□ 0.93
MSLN-207ENST00000566549 E9PMD0 336 aa20.87■□□□□ 0.93
MSLN-207ENST00000566549 CACNB1Q02641 598 aaPredicted RBP20.87■□□□□ 0.93
MSLN-207ENST00000566549 RAD51AP2Q09MP3 1159 aa20.87■□□□□ 0.93
MSLN-207ENST00000566549 P2RX7Q99572 595 aaKnown RBP20.87■□□□□ 0.93
MSLN-207ENST00000566549 TFR2Q9UP52 801 aa20.87■□□□□ 0.93
MSLN-207ENST00000566549 SIPA1L1O43166 1804 aa20.86■□□□□ 0.93
MSLN-207ENST00000566549 CLRN2A0PK11 232 aa20.86■□□□□ 0.93
MSLN-207ENST00000566549 TCP10L2B9ZVM9 353 aa20.86■□□□□ 0.93
MSLN-207ENST00000566549 FKBP1AP62942 108 aaKnown RBP20.86■□□□□ 0.93
MSLN-207ENST00000566549 MIIPQ5JXC2 388 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms