RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 SNX14Q9Y5W7 946 aa22.36■■□□□ 1.17
CCDC113-204ENST00000566498 GCOM1H8Y6P7 765 aaPredicted RBP22.35■■□□□ 1.17
CCDC113-204ENST00000566498 OPLAHO14841 1288 aa22.35■■□□□ 1.17
CCDC113-204ENST00000566498 ZEB2O60315 1214 aa22.35■■□□□ 1.17
CCDC113-204ENST00000566498 PLEKHA8P1O95397 391 aa22.35■■□□□ 1.17
CCDC113-204ENST00000566498 POLR2MP0CAP2 368 aa22.35■■□□□ 1.17
CCDC113-204ENST00000566498 PTGS1P23219 599 aa22.35■■□□□ 1.17
CCDC113-204ENST00000566498 EDNRBP24530 442 aa22.35■■□□□ 1.17
CCDC113-204ENST00000566498 HOXA13P31271 388 aaPredicted RBP22.35■■□□□ 1.17
CCDC113-204ENST00000566498 HSD17B4P51659 736 aa22.35■■□□□ 1.17
CCDC113-204ENST00000566498 TLE2Q04725 743 aa22.35■■□□□ 1.17
CCDC113-204ENST00000566498 STXBP2Q15833 593 aa22.35■■□□□ 1.17
CCDC113-204ENST00000566498 DUSP28Q4G0W2 176 aa22.35■■□□□ 1.17
CCDC113-204ENST00000566498 LBHD1Q9BQE6 289 aaPredicted RBP22.35■■□□□ 1.17
CCDC113-204ENST00000566498 PRDM5Q9NQX1 630 aaPredicted RBP22.35■■□□□ 1.17
CCDC113-204ENST00000566498 CPA1P15085 419 aa22.34■■□□□ 1.17
CCDC113-204ENST00000566498 EIF2AK2P19525 551 aaKnown RBP22.34■■□□□ 1.17
CCDC113-204ENST00000566498 SNX17Q15036 470 aa22.34■■□□□ 1.17
CCDC113-204ENST00000566498 C1orf53Q5VUE5 145 aa22.34■■□□□ 1.17
CCDC113-204ENST00000566498 SEPT14Q6ZU15 432 aa22.34■■□□□ 1.17
CCDC113-204ENST00000566498 FCHSD1Q86WN1 690 aa22.34■■□□□ 1.17
CCDC113-204ENST00000566498 SAMD3Q8N6K7 520 aa22.34■■□□□ 1.17
CCDC113-204ENST00000566498 SCFD2Q8WU76 684 aa22.34■■□□□ 1.17
CCDC113-204ENST00000566498 KCNB2Q92953 911 aa22.34■■□□□ 1.17
CCDC113-204ENST00000566498 RBM47A0AV96 593 aaKnown RBP22.33■■□□□ 1.17
CCDC113-204ENST00000566498 CTAGE5O15320 804 aa22.33■■□□□ 1.17
CCDC113-204ENST00000566498 ZBTB43O43298 467 aa22.33■■□□□ 1.17
CCDC113-204ENST00000566498 PQBP1O60828 265 aaKnown RBP22.33■■□□□ 1.17
CCDC113-204ENST00000566498 TXNP10599 105 aaKnown RBP22.33■■□□□ 1.17
CCDC113-204ENST00000566498 MAGEA10P43363 369 aaPredicted RBP22.33■■□□□ 1.17
CCDC113-204ENST00000566498 MDM2Q00987 491 aaPredicted RBP22.33■■□□□ 1.17
CCDC113-204ENST00000566498 PPP2R5BQ15173 497 aa22.33■■□□□ 1.17
CCDC113-204ENST00000566498 APOA5Q6Q788 366 aa22.33■■□□□ 1.17
CCDC113-204ENST00000566498 BLOC1S2Q6QNY1 142 aa22.33■■□□□ 1.17
CCDC113-204ENST00000566498 PXMP2Q9NR77 195 aa22.33■■□□□ 1.17
CCDC113-204ENST00000566498 PCDH10Q9P2E7 1040 aa22.33■■□□□ 1.17
CCDC113-204ENST00000566498 BRPF3Q9ULD4 1205 aa22.33■■□□□ 1.17
CCDC113-204ENST00000566498 ELP1O95163 1332 aa22.32■■□□□ 1.16
CCDC113-204ENST00000566498 NR3C2P08235 984 aa22.32■■□□□ 1.16
CCDC113-204ENST00000566498 MYCLP12524 364 aaPredicted RBP22.32■■□□□ 1.16
CCDC113-204ENST00000566498 PSMA5P28066 241 aa22.32■■□□□ 1.16
CCDC113-204ENST00000566498 NKX3-2P78367 333 aa22.32■■□□□ 1.16
CCDC113-204ENST00000566498 TTLL4Q14679 1199 aa22.32■■□□□ 1.16
CCDC113-204ENST00000566498 CXCL17Q6UXB2 119 aa22.32■■□□□ 1.16
CCDC113-204ENST00000566498 OR6J1Q8NGC5 347 aa22.32■■□□□ 1.16
CCDC113-204ENST00000566498 GDF15Q99988 308 aa22.32■■□□□ 1.16
CCDC113-204ENST00000566498 KLF18A0A0U1RQI7 1052 aa22.31■■□□□ 1.16
CCDC113-204ENST00000566498 hCG_1642624A0A1W2PR95 340 aa22.31■■□□□ 1.16
CCDC113-204ENST00000566498 DCDC2CA8MYV0 355 aa22.31■■□□□ 1.16
CCDC113-204ENST00000566498 EIF3JO75822 258 aaKnown RBP22.31■■□□□ 1.16
CCDC113-204ENST00000566498 Q6ZUG5 572 aa22.31■■□□□ 1.16
CCDC113-204ENST00000566498 USP26Q9BXU7 913 aa22.31■■□□□ 1.16
CCDC113-204ENST00000566498 UBE2OQ9C0C9 1292 aaKnown RBP22.31■■□□□ 1.16
CCDC113-204ENST00000566498 RBM28Q9NW13 759 aaKnown RBP22.31■■□□□ 1.16
CCDC113-204ENST00000566498 NKRFO15226 690 aaKnown RBP eCLIP22.3■■□□□ 1.16
CCDC113-204ENST00000566498 GHRHRQ02643 423 aa22.3■■□□□ 1.16
CCDC113-204ENST00000566498 RTN1Q16799 776 aa22.3■■□□□ 1.16
CCDC113-204ENST00000566498 BRDTQ58F21 947 aaPredicted RBP22.3■■□□□ 1.16
CCDC113-204ENST00000566498 TMTC3Q6ZXV5 915 aa22.3■■□□□ 1.16
CCDC113-204ENST00000566498 CUL5Q93034 780 aa22.3■■□□□ 1.16
CCDC113-204ENST00000566498 PRO3102Q9H379 93 aa22.3■■□□□ 1.16
CCDC113-204ENST00000566498 LRRC37A2A6NM11 1700 aa22.3■■□□□ 1.16
CCDC113-204ENST00000566498 A0A0U1RQG5 324 aaPredicted RBP22.29■■□□□ 1.16
CCDC113-204ENST00000566498 EPB41L2O43491 1005 aaKnown RBP22.29■■□□□ 1.16
CCDC113-204ENST00000566498 CABYRO75952 493 aa22.29■■□□□ 1.16
CCDC113-204ENST00000566498 CASTP20810 708 aaKnown RBP22.29■■□□□ 1.16
CCDC113-204ENST00000566498 BMP8BP34820 402 aa22.29■■□□□ 1.16
CCDC113-204ENST00000566498 CPT1AP50416 773 aa22.29■■□□□ 1.16
CCDC113-204ENST00000566498 LY6KQ17RY6 165 aa22.29■■□□□ 1.16
CCDC113-204ENST00000566498 SH3RF1Q7Z6J0 888 aa22.29■■□□□ 1.16
CCDC113-204ENST00000566498 SMARCC2Q8TAQ2 1214 aa22.29■■□□□ 1.16
CCDC113-204ENST00000566498 COPS5Q92905 334 aa22.29■■□□□ 1.16
CCDC113-204ENST00000566498 PDCD2LQ9BRP1 358 aa22.29■■□□□ 1.16
CCDC113-204ENST00000566498 TMEM39AQ9NV64 488 aa22.29■■□□□ 1.16
CCDC113-204ENST00000566498 GOLGA8AA7E2F4 631 aa22.28■■□□□ 1.16
CCDC113-204ENST00000566498 GOLGA8BA8MQT2 603 aa22.28■■□□□ 1.16
CCDC113-204ENST00000566498 ARVCFO00192 962 aa22.28■■□□□ 1.16
CCDC113-204ENST00000566498 MYL3P08590 195 aa22.28■■□□□ 1.16
CCDC113-204ENST00000566498 CLTBP09497 229 aa22.28■■□□□ 1.16
CCDC113-204ENST00000566498 RPS6KB1P23443 525 aa22.28■■□□□ 1.16
CCDC113-204ENST00000566498 APOBRQ0VD83 1088 aa22.28■■□□□ 1.16
CCDC113-204ENST00000566498 ANKRD33Q7Z3H0 272 aa22.28■■□□□ 1.16
CCDC113-204ENST00000566498 BRF1Q92994 677 aa22.28■■□□□ 1.16
CCDC113-204ENST00000566498 TOX2Q96NM4 488 aa22.28■■□□□ 1.16
CCDC113-204ENST00000566498 MROH7Q68CQ1 1323 aa22.28■■□□□ 1.16
CCDC113-204ENST00000566498 ARIH2O95376 493 aa22.27■■□□□ 1.16
CCDC113-204ENST00000566498 CCND2P30279 289 aa22.27■■□□□ 1.16
CCDC113-204ENST00000566498 CDK7P50613 346 aa22.27■■□□□ 1.16
CCDC113-204ENST00000566498 PGM5Q15124 567 aa22.27■■□□□ 1.16
CCDC113-204ENST00000566498 CCDC62Q6P9F0 684 aa22.27■■□□□ 1.16
CCDC113-204ENST00000566498 HEATR3Q7Z4Q2 680 aa22.27■■□□□ 1.16
CCDC113-204ENST00000566498 VSIG10LQ86VR7 867 aa22.27■■□□□ 1.16
CCDC113-204ENST00000566498 PSTPIP2Q9H939 334 aa22.27■■□□□ 1.16
CCDC113-204ENST00000566498 PDLIM7Q9NR12 457 aa22.27■■□□□ 1.16
CCDC113-204ENST00000566498 POLR3EQ9NVU0 708 aa22.27■■□□□ 1.16
CCDC113-204ENST00000566498 MRVI1Q9Y6F6 885 aa22.27■■□□□ 1.16
CCDC113-204ENST00000566498 V9GY48 417 aaPredicted RBP22.27■■□□□ 1.16
CCDC113-204ENST00000566498 TRIM43BA6NCK2 446 aa22.26■■□□□ 1.15
CCDC113-204ENST00000566498 FAAP100Q0VG06 881 aa22.26■■□□□ 1.15
CCDC113-204ENST00000566498 ITGA7Q13683 1181 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms