RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
LINC00562-201ENST00000566385 SREBF1P36956 1147 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 FXR2P51116 673 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC00562-201ENST00000566385 VGLL4Q14135 290 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 SUPT20HL1Q3ZLR7 823 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 DPY19L2Q6NUT2 758 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 KRT26Q7Z3Y9 468 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 SULF1Q8IWU6 871 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 HOOK2Q96ED9 719 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 AK8Q96MA6 479 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 BPIFA3Q9BQP9 254 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 SLC38A10Q9HBR0 1119 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 KCNMB3Q9NPA1 279 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 GINM1Q9NU53 330 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 PCDHA12Q9UN75 941 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 CYP3A7-CYP3A51PA0A087WV96 503 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 ATP1A3P13637 1013 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 CYP3A7P24462 503 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 GRB10Q13322 594 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 DHX8Q14562 1220 aaKnown RBP12.8□□□□□ -0.36
LINC00562-201ENST00000566385 HSP90AA4PQ58FG1 418 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 MUM1L1Q5H9M0 696 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 TRMT44Q8IYL2 757 aaKnown RBP12.8□□□□□ -0.36
LINC00562-201ENST00000566385 ATG4CQ96DT6 458 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 ZNF830Q96NB3 372 aaPredicted RBP12.8□□□□□ -0.36
LINC00562-201ENST00000566385 COL20A1Q9P218 1284 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 PPP1R9AQ9ULJ8 1098 aa12.8□□□□□ -0.36
LINC00562-201ENST00000566385 GCFC2P16383 781 aaKnown RBP12.79□□□□□ -0.36
LINC00562-201ENST00000566385 STAT3P40763 770 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 KCNK18Q7Z418 384 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 PLA2G4DQ86XP0 818 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 CLEC4DQ8WXI8 215 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 MBOAT7Q96N66 472 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 PNMA5Q96PV4 448 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 KBTBD4Q9NVX7 518 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 AFG3L2Q9Y4W6 797 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 RIPK3Q9Y572 518 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 SNCAIPQ9Y6H5 919 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 COL11A1P12107 1806 aaPredicted RBP12.79□□□□□ -0.36
LINC00562-201ENST00000566385 POTECB2RU33 542 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 GCOM1H8Y6P7 765 aaPredicted RBP12.79□□□□□ -0.36
LINC00562-201ENST00000566385 MARCH6O60337 910 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 COBLO75128 1261 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 FOSP01100 380 aaPredicted RBP12.79□□□□□ -0.36
LINC00562-201ENST00000566385 POLR2MP0CAP2 368 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 ALAS1P13196 640 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 EPHX2P34913 555 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 ZNF75DP51815 510 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 USP14P54578 494 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 ETNPPLQ8TBG4 499 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 GSDMAQ96QA5 445 aa12.79□□□□□ -0.36
LINC00562-201ENST00000566385 MRPL11Q9Y3B7 192 aaKnown RBP12.79□□□□□ -0.36
LINC00562-201ENST00000566385 OTOFQ9HC10 1997 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 VWA5AO00534 786 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 PDIA5Q14554 519 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 L3MBTL3Q96JM7 780 aaPredicted RBP12.78□□□□□ -0.36
LINC00562-201ENST00000566385 PURBQ96QR8 312 aaKnown RBP12.78□□□□□ -0.36
LINC00562-201ENST00000566385 AS3MTQ9HBK9 375 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 BLOC1S4Q9NUP1 217 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.78□□□□□ -0.36
LINC00562-201ENST00000566385 CCDC39Q9UFE4 941 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 NRBP1Q9UHY1 535 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 IGLV3-22A0A075B6J6 115 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 GLTPD2A6NH11 291 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
LINC00562-201ENST00000566385 PEX10O60683 326 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 SMC2O95347 1197 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 POTEJP0CG39 1038 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 TMEM266Q2M3C6 531 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 KLHL10Q6JEL2 608 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 SNX29Q8TEQ0 813 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 CLMNQ96JQ2 1002 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 RRAGDQ9NQL2 400 aaPredicted RBP12.78□□□□□ -0.36
LINC00562-201ENST00000566385 FANCLQ9NW38 375 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 MAPK8IP1Q9UQF2 711 aa12.78□□□□□ -0.36
LINC00562-201ENST00000566385 ABCB11O95342 1321 aa12.77□□□□□ -0.36
LINC00562-201ENST00000566385 MSH4O15457 936 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 SPIRE1Q08AE8 756 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 EAPPQ56P03 285 aaPredicted RBP12.77□□□□□ -0.37
LINC00562-201ENST00000566385 NOL9Q5SY16 702 aaKnown RBP12.77□□□□□ -0.37
LINC00562-201ENST00000566385 TRIML1Q8N9V2 468 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 PYM1Q9BRP8 204 aaKnown RBP12.77□□□□□ -0.37
LINC00562-201ENST00000566385 PPP1R3GB7ZBB8 358 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 IKBKBO14920 756 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 KLRC4O43908 158 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 RPN1P04843 607 aaKnown RBP12.77□□□□□ -0.37
LINC00562-201ENST00000566385 PTMAP06454 111 aaKnown RBP12.77□□□□□ -0.37
LINC00562-201ENST00000566385 CIITAP33076 1130 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 STX17P56962 302 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 MAP3K9P80192 1104 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 MYL5Q02045 173 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 Q4G0T1 1027 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 SARM1Q6SZW1 724 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 MLKLQ8NB16 471 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 CCDC34Q96HJ3 373 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 GDAQ9Y2T3 454 aa12.77□□□□□ -0.37
LINC00562-201ENST00000566385 WDR90Q96KV7 1748 aa12.76□□□□□ -0.37
LINC00562-201ENST00000566385 PAPPA2Q9BXP8 1791 aa12.76□□□□□ -0.37
LINC00562-201ENST00000566385 PTPRFP10586 1907 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms