RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 SEPT2Q15019 361 aa19.03■□□□□ 0.64
RAB40C-210ENST00000566290 ZRSR1Q15695 479 aaKnown RBP19.03■□□□□ 0.64
RAB40C-210ENST00000566290 RASGRP2Q7LDG7 609 aa19.03■□□□□ 0.64
RAB40C-210ENST00000566290 SH3RF1Q7Z6J0 888 aa19.03■□□□□ 0.64
RAB40C-210ENST00000566290 PRRT2Q7Z6L0 340 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-210ENST00000566290 NEK8Q86SG6 692 aa19.03■□□□□ 0.64
RAB40C-210ENST00000566290 CNNM3Q8NE01 707 aa19.03■□□□□ 0.64
RAB40C-210ENST00000566290 HTATIP2Q9BUP3 242 aa19.03■□□□□ 0.64
RAB40C-210ENST00000566290 DNAJC25Q9H1X3 360 aa19.03■□□□□ 0.64
RAB40C-210ENST00000566290 ARHGEF10LQ9HCE6 1279 aa19.03■□□□□ 0.64
RAB40C-210ENST00000566290 NR2E3Q9Y5X4 410 aa19.03■□□□□ 0.64
RAB40C-210ENST00000566290 PTPRFP10586 1907 aa19.03■□□□□ 0.64
RAB40C-210ENST00000566290 BAZ2BQ9UIF8 2168 aaKnown RBP19.02■□□□□ 0.64
RAB40C-210ENST00000566290 A0A1W2PPC1 479 aa19.02■□□□□ 0.64
RAB40C-210ENST00000566290 PDHXO00330 501 aa19.02■□□□□ 0.64
RAB40C-210ENST00000566290 WNT7AO00755 349 aa19.02■□□□□ 0.64
RAB40C-210ENST00000566290 TPM3P06753 285 aa19.02■□□□□ 0.64
RAB40C-210ENST00000566290 CDC25BP30305 580 aa19.02■□□□□ 0.64
RAB40C-210ENST00000566290 SLC1A4P43007 532 aa19.02■□□□□ 0.64
RAB40C-210ENST00000566290 SARSP49591 514 aaKnown RBP19.02■□□□□ 0.64
RAB40C-210ENST00000566290 LACTBP83111 547 aaPredicted RBP19.02■□□□□ 0.64
RAB40C-210ENST00000566290 SPP2Q13103 211 aa19.02■□□□□ 0.64
RAB40C-210ENST00000566290 CCDC96Q2M329 555 aa19.02■□□□□ 0.64
RAB40C-210ENST00000566290 LONRF3Q496Y0 759 aa19.02■□□□□ 0.64
RAB40C-210ENST00000566290 ANKRD23Q86SG2 305 aa19.02■□□□□ 0.64
RAB40C-210ENST00000566290 COL25A1Q9BXS0 654 aaPredicted RBP19.02■□□□□ 0.64
RAB40C-210ENST00000566290 TMX2Q9Y320 296 aa19.02■□□□□ 0.64
RAB40C-210ENST00000566290 FRMPD2Q68DX3 1309 aaPredicted RBP19.01■□□□□ 0.63
RAB40C-210ENST00000566290 F5H6K3 240 aa19.01■□□□□ 0.63
RAB40C-210ENST00000566290 GH2P01242 217 aa19.01■□□□□ 0.63
RAB40C-210ENST00000566290 MYL1P05976 194 aa19.01■□□□□ 0.63
RAB40C-210ENST00000566290 MRPL12P52815 198 aaKnown RBP19.01■□□□□ 0.63
RAB40C-210ENST00000566290 GRIN1Q05586 938 aa19.01■□□□□ 0.63
RAB40C-210ENST00000566290 KLRC3Q07444 240 aa19.01■□□□□ 0.63
RAB40C-210ENST00000566290 POSTNQ15063 836 aa19.01■□□□□ 0.63
RAB40C-210ENST00000566290 C11orf57Q6ZUT1 292 aaPredicted RBP19.01■□□□□ 0.63
RAB40C-210ENST00000566290 HOMER1Q86YM7 354 aa19.01■□□□□ 0.63
RAB40C-210ENST00000566290 CLEC10AQ8IUN9 316 aa19.01■□□□□ 0.63
RAB40C-210ENST00000566290 CCSER1Q9C0I3 900 aa19.01■□□□□ 0.63
RAB40C-210ENST00000566290 UBA5Q9GZZ9 404 aa19.01■□□□□ 0.63
RAB40C-210ENST00000566290 MAGEF1Q9HAY2 307 aa19.01■□□□□ 0.63
RAB40C-210ENST00000566290 ZBTB21Q9ULJ3 1066 aa19.01■□□□□ 0.63
RAB40C-210ENST00000566290 SLC26A4O43511 780 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 TLR2O60603 784 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 ADCY5O95622 1261 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 NDUFB10O96000 172 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 CYP2C8P10632 490 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 GCFC2P16383 781 aaKnown RBP19■□□□□ 0.63
RAB40C-210ENST00000566290 CTGFP29279 349 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 TXLNAP40222 546 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 GJA8P48165 433 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 KIF22Q14807 665 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 ZNF174Q15697 407 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 TREML2Q5T2D2 321 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 PPP4R3AQ6IN85 833 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 MOXD1Q6UVY6 613 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 GADL1Q6ZQY3 521 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 LUZP1Q86V48 1076 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 ZNF280CQ8ND82 737 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 SYMPKQ92797 1274 aaKnown RBP19■□□□□ 0.63
RAB40C-210ENST00000566290 CUL5Q93034 780 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 CUEDC2Q9H467 287 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 ADGRA2Q96PE1 1338 aa19■□□□□ 0.63
RAB40C-210ENST00000566290 GOLGA6L19H0YKK7 550 aa18.99■□□□□ 0.63
RAB40C-210ENST00000566290 ADAMTS3O15072 1205 aa18.99■□□□□ 0.63
RAB40C-210ENST00000566290 POLR2DO15514 142 aaKnown RBP18.99■□□□□ 0.63
RAB40C-210ENST00000566290 ASNSP08243 561 aa18.99■□□□□ 0.63
RAB40C-210ENST00000566290 AP3B2Q13367 1082 aa18.99■□□□□ 0.63
RAB40C-210ENST00000566290 E2F4Q16254 413 aa18.99■□□□□ 0.63
RAB40C-210ENST00000566290 Q7L0L9 218 aa18.99■□□□□ 0.63
RAB40C-210ENST00000566290 ZSCAN30Q86W11 494 aa18.99■□□□□ 0.63
RAB40C-210ENST00000566290 IQUBQ8NA54 791 aa18.99■□□□□ 0.63
RAB40C-210ENST00000566290 CPVLQ9H3G5 476 aa18.99■□□□□ 0.63
RAB40C-210ENST00000566290 GOPCQ9HD26 462 aa18.99■□□□□ 0.63
RAB40C-210ENST00000566290 ZCCHC17Q9NP64 241 aaKnown RBP18.99■□□□□ 0.63
RAB40C-210ENST00000566290 GPCPD1Q9NPB8 672 aa18.99■□□□□ 0.63
RAB40C-210ENST00000566290 DACH1Q9UI36 760 aa18.99■□□□□ 0.63
RAB40C-210ENST00000566290 SMTNL1A8MU46 457 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 PPP1R11O60927 126 aaPredicted RBP18.98■□□□□ 0.63
RAB40C-210ENST00000566290 SMC2O95347 1197 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 GJB1P08034 283 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 BMP3P12645 472 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 CCL5P13501 91 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 ATP2B1P20020 1258 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 MCM7P33993 719 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 HMGCS2P54868 508 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 INF2Q27J81 1249 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 DTHD1Q6ZMT9 781 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 PLA2G4DQ86XP0 818 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 DHX40Q8IX18 779 aaKnown RBP18.98■□□□□ 0.63
RAB40C-210ENST00000566290 MLKLQ8NB16 471 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 PIBF1Q8WXW3 757 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 MRFAP1L1Q96HT8 127 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 GSDMAQ96QA5 445 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 CPA4Q9UI42 421 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 MTMR7Q9Y216 660 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 UNC80Q8N2C7 3258 aa18.98■□□□□ 0.63
RAB40C-210ENST00000566290 VWA3AA6NCI4 1184 aa18.97■□□□□ 0.63
RAB40C-210ENST00000566290 ESPNB1AK53 854 aa18.97■□□□□ 0.63
RAB40C-210ENST00000566290 NEMFO60524 1076 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms