RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 AKAP17AQ02040 695 aaKnown RBP24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 PKN1Q16512 942 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 TRIM22Q8IYM9 498 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 PSTPIP2Q9H939 334 aa24.26■■□□□ 1.47
SHCBP1-205ENST00000566016 FRMPD4Q14CM0 1322 aa24.25■■□□□ 1.47
SHCBP1-205ENST00000566016 MEIS2O14770 477 aa24.25■■□□□ 1.47
SHCBP1-205ENST00000566016 HOXA13P31271 388 aaPredicted RBP24.25■■□□□ 1.47
SHCBP1-205ENST00000566016 ANKLE1Q8NAG6 615 aa24.25■■□□□ 1.47
SHCBP1-205ENST00000566016 CUL5Q93034 780 aa24.25■■□□□ 1.47
SHCBP1-205ENST00000566016 TAAR1Q96RJ0 339 aa24.25■■□□□ 1.47
SHCBP1-205ENST00000566016 PXMP2Q9NR77 195 aa24.25■■□□□ 1.47
SHCBP1-205ENST00000566016 ZHX1Q9UKY1 873 aaPredicted RBP24.25■■□□□ 1.47
SHCBP1-205ENST00000566016 ESYT2A0FGR8 921 aa24.24■■□□□ 1.47
SHCBP1-205ENST00000566016 NAPAP54920 295 aa24.24■■□□□ 1.47
SHCBP1-205ENST00000566016 ME3Q16798 604 aa24.24■■□□□ 1.47
SHCBP1-205ENST00000566016 TYW1BQ6NUM6 668 aa24.24■■□□□ 1.47
SHCBP1-205ENST00000566016 GTF3C6Q969F1 213 aa24.24■■□□□ 1.47
SHCBP1-205ENST00000566016 SLC26A6Q9BXS9 759 aa24.24■■□□□ 1.47
SHCBP1-205ENST00000566016 GLT8D2Q9H1C3 349 aa24.24■■□□□ 1.47
SHCBP1-205ENST00000566016 FAM184BQ9ULE4 1060 aa24.24■■□□□ 1.47
SHCBP1-205ENST00000566016 LIMCH1Q9UPQ0 1083 aa24.24■■□□□ 1.47
SHCBP1-205ENST00000566016 STK36Q9NRP7 1315 aa24.23■■□□□ 1.47
SHCBP1-205ENST00000566016 PDE4DQ08499 809 aa24.23■■□□□ 1.47
SHCBP1-205ENST00000566016 ARHGEF16Q5VV41 709 aa24.23■■□□□ 1.47
SHCBP1-205ENST00000566016 FAM177A1Q8N128 213 aaPredicted RBP24.23■■□□□ 1.47
SHCBP1-205ENST00000566016 CCDC12Q8WUD4 166 aaPredicted RBP24.23■■□□□ 1.47
SHCBP1-205ENST00000566016 PDE4DIPQ5VU43 2346 aa24.23■■□□□ 1.47
SHCBP1-205ENST00000566016 TFRCP02786 760 aaKnown RBP24.22■■□□□ 1.47
SHCBP1-205ENST00000566016 SSRP1Q08945 709 aaKnown RBP24.22■■□□□ 1.47
SHCBP1-205ENST00000566016 CCDC144BQ3MJ40 725 aa24.22■■□□□ 1.47
SHCBP1-205ENST00000566016 SMARCC2Q8TAQ2 1214 aa24.22■■□□□ 1.47
SHCBP1-205ENST00000566016 PDCD2LQ9BRP1 358 aa24.22■■□□□ 1.47
SHCBP1-205ENST00000566016 RIC8AQ9NPQ8 531 aa24.22■■□□□ 1.47
SHCBP1-205ENST00000566016 ST18O60284 1047 aa24.21■■□□□ 1.47
SHCBP1-205ENST00000566016 DEXIO95424 95 aa24.21■■□□□ 1.47
SHCBP1-205ENST00000566016 LARGE1O95461 756 aa24.21■■□□□ 1.47
SHCBP1-205ENST00000566016 RARBP10826 455 aa24.21■■□□□ 1.47
SHCBP1-205ENST00000566016 USP17L6PQ6QN14 398 aa24.21■■□□□ 1.47
SHCBP1-205ENST00000566016 UBE2Q1Q7Z7E8 422 aa24.21■■□□□ 1.47
SHCBP1-205ENST00000566016 FBXO16Q8IX29 292 aaPredicted RBP24.21■■□□□ 1.47
SHCBP1-205ENST00000566016 SH3GLB2Q9NR46 395 aa24.21■■□□□ 1.47
SHCBP1-205ENST00000566016 DDX49Q9Y6V7 483 aaKnown RBP24.21■■□□□ 1.47
SHCBP1-205ENST00000566016 NR3C2P08235 984 aa24.2■■□□□ 1.47
SHCBP1-205ENST00000566016 EIF2AK2P19525 551 aaKnown RBP24.2■■□□□ 1.47
SHCBP1-205ENST00000566016 ADCY7P51828 1080 aa24.2■■□□□ 1.47
SHCBP1-205ENST00000566016 TAPT1Q6NXT6 567 aa24.2■■□□□ 1.47
SHCBP1-205ENST00000566016 NOL8Q76FK4 1167 aaKnown RBP24.2■■□□□ 1.47
SHCBP1-205ENST00000566016 FCHSD1Q86WN1 690 aa24.2■■□□□ 1.47
SHCBP1-205ENST00000566016 CCDC148Q8NFR7 591 aa24.2■■□□□ 1.47
SHCBP1-205ENST00000566016 ZMYND12Q9H0C1 365 aa24.2■■□□□ 1.47
SHCBP1-205ENST00000566016 RBM47A0AV96 593 aaKnown RBP24.19■■□□□ 1.46
SHCBP1-205ENST00000566016 DUSP11O75319 330 aaKnown RBP24.19■■□□□ 1.46
SHCBP1-205ENST00000566016 PGM5Q15124 567 aa24.19■■□□□ 1.46
SHCBP1-205ENST00000566016 STXBP2Q15833 593 aa24.19■■□□□ 1.46
SHCBP1-205ENST00000566016 IQSEC1Q6DN90 963 aa24.19■■□□□ 1.46
SHCBP1-205ENST00000566016 ZSCAN31Q96LW9 406 aaPredicted RBP24.19■■□□□ 1.46
SHCBP1-205ENST00000566016 SH2B1Q9NRF2 756 aaPredicted RBP24.19■■□□□ 1.46
SHCBP1-205ENST00000566016 EEPD1Q7L9B9 569 aa24.19■■□□□ 1.46
SHCBP1-205ENST00000566016 XPNPEP3Q9NQH7 507 aa24.19■■□□□ 1.46
SHCBP1-205ENST00000566016 TNRC18O15417 2968 aaPredicted RBP24.18■■□□□ 1.46
SHCBP1-205ENST00000566016 SMCO2A6NFE2 343 aa24.18■■□□□ 1.46
SHCBP1-205ENST00000566016 ADCY6O43306 1168 aa24.18■■□□□ 1.46
SHCBP1-205ENST00000566016 EIF3JO75822 258 aaKnown RBP24.18■■□□□ 1.46
SHCBP1-205ENST00000566016 FARP2O94887 1054 aaPredicted RBP24.18■■□□□ 1.46
SHCBP1-205ENST00000566016 CTDNEP1O95476 244 aa24.18■■□□□ 1.46
SHCBP1-205ENST00000566016 XRRA1Q6P2D8 792 aa24.18■■□□□ 1.46
SHCBP1-205ENST00000566016 VSIG10LQ86VR7 867 aa24.18■■□□□ 1.46
SHCBP1-205ENST00000566016 NECAB1Q8N987 351 aa24.18■■□□□ 1.46
SHCBP1-205ENST00000566016 SCFD2Q8WU76 684 aa24.18■■□□□ 1.46
SHCBP1-205ENST00000566016 SPDYE3A6NKU9 549 aa24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 DNM1LO00429 736 aa24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 PPFIA3O75145 1194 aa24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 STAM2O75886 525 aa24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 FOSP01100 380 aaPredicted RBP24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 GNA11P29992 359 aa24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 ADCYAP1R1P41586 468 aa24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 MNX1P50219 401 aaPredicted RBP24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 TNFAIP2Q03169 654 aa24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 AP3B2Q13367 1082 aa24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 ARRDC4Q8NCT1 418 aa24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 GNEQ9Y223 722 aaKnown RBP24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 Q9Y3F1 56 aa24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 DNAH12Q6ZR08 3092 aa24.17■■□□□ 1.46
SHCBP1-205ENST00000566016 CCND2P30279 289 aa24.16■■□□□ 1.46
SHCBP1-205ENST00000566016 CLK2P49760 499 aaKnown RBP24.16■■□□□ 1.46
SHCBP1-205ENST00000566016 NKX3-2P78367 333 aa24.16■■□□□ 1.46
SHCBP1-205ENST00000566016 UBE2SQ16763 222 aa24.16■■□□□ 1.46
SHCBP1-205ENST00000566016 DUSP28Q4G0W2 176 aa24.16■■□□□ 1.46
SHCBP1-205ENST00000566016 ANO1Q5XXA6 986 aa24.16■■□□□ 1.46
SHCBP1-205ENST00000566016 MCTP2Q6DN12 878 aa24.16■■□□□ 1.46
SHCBP1-205ENST00000566016 IL31RAQ8NI17 732 aa24.16■■□□□ 1.46
SHCBP1-205ENST00000566016 UPF3AQ9H1J1 476 aaKnown RBP24.16■■□□□ 1.46
SHCBP1-205ENST00000566016 C6orf50Q9HD87 102 aa24.16■■□□□ 1.46
SHCBP1-205ENST00000566016 PDGFCQ9NRA1 345 aa24.16■■□□□ 1.46
SHCBP1-205ENST00000566016 SYNRGQ9UMZ2 1314 aa24.16■■□□□ 1.46
SHCBP1-205ENST00000566016 ADAMTS4O75173 837 aa24.15■■□□□ 1.46
SHCBP1-205ENST00000566016 MCM2P49736 904 aa24.15■■□□□ 1.46
SHCBP1-205ENST00000566016 ST3GAL1Q11201 340 aa24.15■■□□□ 1.46
SHCBP1-205ENST00000566016 PCNX4Q63HM2 1172 aa24.15■■□□□ 1.46
SHCBP1-205ENST00000566016 NSUN7Q8NE18 718 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms