RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SLC30A10Q6XR72 485 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 MSL3Q8N5Y2 521 aaKnown RBP14.46□□□□□ -0.09
SF3B3-206ENST00000565990 BICD2Q8TD16 824 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 MORC4Q8TE76 937 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 PXYLP1Q8TE99 480 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 C8orf76Q96K31 380 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 PURBQ96QR8 312 aaKnown RBP14.46□□□□□ -0.09
SF3B3-206ENST00000565990 TAAR1Q96RJ0 339 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 PCDHA6Q9UN73 950 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 KIF3AQ9Y496 699 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 PCDHA8Q9Y5H6 950 aa14.46□□□□□ -0.09
SF3B3-206ENST00000565990 FRMPD4Q14CM0 1322 aa14.45□□□□□ -0.1
SF3B3-206ENST00000565990 PDIA4P13667 645 aaKnown RBP14.45□□□□□ -0.1
SF3B3-206ENST00000565990 HOXA13P31271 388 aaPredicted RBP14.45□□□□□ -0.1
SF3B3-206ENST00000565990 LARP1BQ659C4 914 aaKnown RBP14.45□□□□□ -0.1
SF3B3-206ENST00000565990 BLIDQ8IZY5 108 aa14.45□□□□□ -0.1
SF3B3-206ENST00000565990 NSUN6Q8TEA1 469 aaKnown RBP14.45□□□□□ -0.1
SF3B3-206ENST00000565990 TNFRSF25Q93038 417 aa14.45□□□□□ -0.1
SF3B3-206ENST00000565990 MAML3Q96JK9 1138 aa14.45□□□□□ -0.1
SF3B3-206ENST00000565990 IWS1Q96ST2 819 aa14.45□□□□□ -0.1
SF3B3-206ENST00000565990 PTPN22Q9Y2R2 807 aa14.45□□□□□ -0.1
SF3B3-206ENST00000565990 TRIM17Q9Y577 477 aa14.45□□□□□ -0.1
SF3B3-206ENST00000565990 MYH7BA7E2Y1 1941 aa14.45□□□□□ -0.1
SF3B3-206ENST00000565990 RPTORQ8N122 1335 aa14.44□□□□□ -0.1
SF3B3-206ENST00000565990 MCM3APO60318 1980 aa14.44□□□□□ -0.1
SF3B3-206ENST00000565990 ECM2O94769 699 aaPredicted RBP14.44□□□□□ -0.1
SF3B3-206ENST00000565990 CYP2B6P20813 491 aa14.44□□□□□ -0.1
SF3B3-206ENST00000565990 PDCP20941 246 aa14.44□□□□□ -0.1
SF3B3-206ENST00000565990 EDNRBP24530 442 aa14.44□□□□□ -0.1
SF3B3-206ENST00000565990 AP3B2Q13367 1082 aa14.44□□□□□ -0.1
SF3B3-206ENST00000565990 TRIM29Q14134 588 aa14.44□□□□□ -0.1
SF3B3-206ENST00000565990 PKN2Q16513 984 aaKnown RBP14.44□□□□□ -0.1
SF3B3-206ENST00000565990 OLFML2BQ68BL8 750 aa14.44□□□□□ -0.1
SF3B3-206ENST00000565990 CTU1Q7Z7A3 348 aaKnown RBP14.44□□□□□ -0.1
SF3B3-206ENST00000565990 TRMT44Q8IYL2 757 aaKnown RBP14.44□□□□□ -0.1
SF3B3-206ENST00000565990 CRYGNQ8WXF5 182 aa14.44□□□□□ -0.1
SF3B3-206ENST00000565990 RMDN3Q96TC7 470 aa14.44□□□□□ -0.1
SF3B3-206ENST00000565990 FLRT1Q9NZU1 646 aa14.44□□□□□ -0.1
SF3B3-206ENST00000565990 BIN2Q9UBW5 565 aaPredicted RBP14.44□□□□□ -0.1
SF3B3-206ENST00000565990 ADD3Q9UEY8 706 aaKnown RBP14.44□□□□□ -0.1
SF3B3-206ENST00000565990 ASB14A6NK59 587 aa14.43□□□□□ -0.1
SF3B3-206ENST00000565990 BTBD18B2RXH4 712 aa14.43□□□□□ -0.1
SF3B3-206ENST00000565990 SYT1P21579 422 aa14.43□□□□□ -0.1
SF3B3-206ENST00000565990 ALDH5A1P51649 535 aaPredicted RBP14.43□□□□□ -0.1
SF3B3-206ENST00000565990 UBE2SQ16763 222 aa14.43□□□□□ -0.1
SF3B3-206ENST00000565990 VSIG10LQ86VR7 867 aa14.43□□□□□ -0.1
SF3B3-206ENST00000565990 FCHSD1Q86WN1 690 aa14.43□□□□□ -0.1
SF3B3-206ENST00000565990 REXO1Q8N1G1 1221 aaKnown RBP14.43□□□□□ -0.1
SF3B3-206ENST00000565990 OXER1Q8TDS5 423 aa14.43□□□□□ -0.1
SF3B3-206ENST00000565990 APBA2Q99767 749 aa14.43□□□□□ -0.1
SF3B3-206ENST00000565990 FOXP1Q9H334 677 aaPredicted RBP14.43□□□□□ -0.1
SF3B3-206ENST00000565990 PXMP2Q9NR77 195 aa14.43□□□□□ -0.1
SF3B3-206ENST00000565990 FOXD4L1Q9NU39 408 aa14.43□□□□□ -0.1
SF3B3-206ENST00000565990 TMEM260Q9NX78 707 aa14.43□□□□□ -0.1
SF3B3-206ENST00000565990 KIAA1217Q5T5P2 1943 aa14.43□□□□□ -0.1
SF3B3-206ENST00000565990 SYNGAP1Q96PV0 1343 aa14.42□□□□□ -0.1
SF3B3-206ENST00000565990 B4DLN1 442 aa14.42□□□□□ -0.1
SF3B3-206ENST00000565990 EDIL3O43854 480 aa14.42□□□□□ -0.1
SF3B3-206ENST00000565990 SNAI1O95863 264 aaPredicted RBP14.42□□□□□ -0.1
SF3B3-206ENST00000565990 HSP90AA1P07900 732 aaKnown RBP14.42□□□□□ -0.1
SF3B3-206ENST00000565990 CYP3A4P08684 503 aa14.42□□□□□ -0.1
SF3B3-206ENST00000565990 U2AF2P26368 475 aaKnown RBP eCLIP14.42□□□□□ -0.1
SF3B3-206ENST00000565990 KRT2P35908 639 aa14.42□□□□□ -0.1
SF3B3-206ENST00000565990 JAKMIP3Q5VZ66 844 aa14.42□□□□□ -0.1
SF3B3-206ENST00000565990 XRRA1Q6P2D8 792 aa14.42□□□□□ -0.1
SF3B3-206ENST00000565990 PDCD2LQ9BRP1 358 aa14.42□□□□□ -0.1
SF3B3-206ENST00000565990 TINF2Q9BSI4 451 aa14.42□□□□□ -0.1
SF3B3-206ENST00000565990 SPDYE3A6NKU9 549 aa14.41□□□□□ -0.1
SF3B3-206ENST00000565990 ADCY3O60266 1144 aa14.41□□□□□ -0.1
SF3B3-206ENST00000565990 EIF3JO75822 258 aaKnown RBP14.41□□□□□ -0.1
SF3B3-206ENST00000565990 NR3C2P08235 984 aa14.41□□□□□ -0.1
SF3B3-206ENST00000565990 USP11P51784 963 aa14.41□□□□□ -0.1
SF3B3-206ENST00000565990 PGM5Q15124 567 aa14.41□□□□□ -0.1
SF3B3-206ENST00000565990 SAFBQ15424 915 aaKnown RBP eCLIP14.41□□□□□ -0.1
SF3B3-206ENST00000565990 CCL14Q16627 93 aa14.41□□□□□ -0.1
SF3B3-206ENST00000565990 ARHGEF16Q5VV41 709 aa14.41□□□□□ -0.1
SF3B3-206ENST00000565990 PCNX4Q63HM2 1172 aa14.41□□□□□ -0.1
SF3B3-206ENST00000565990 DIS3L2Q8IYB7 885 aaKnown RBP14.41□□□□□ -0.1
SF3B3-206ENST00000565990 TRIB2Q92519 343 aa14.41□□□□□ -0.1
SF3B3-206ENST00000565990 TNPO1Q92973 898 aaKnown RBP14.41□□□□□ -0.1
SF3B3-206ENST00000565990 NRBP1Q9UHY1 535 aa14.41□□□□□ -0.1
SF3B3-206ENST00000565990 SREBF1P36956 1147 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 MRPS9P82933 396 aaKnown RBP14.4□□□□□ -0.1
SF3B3-206ENST00000565990 GUCY1B3Q02153 619 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 NR5A1Q13285 461 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 EARS2Q5JPH6 523 aaKnown RBP14.4□□□□□ -0.1
SF3B3-206ENST00000565990 FBXO46Q6PJ61 603 aaPredicted RBP14.4□□□□□ -0.1
SF3B3-206ENST00000565990 KRT25Q7Z3Z0 450 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 SPRYD3Q8NCJ5 442 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 SLAIN1Q8ND83 568 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 RAET1EQ8TD07 263 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 RASGRP4Q8TDF6 673 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 ANO3Q9BYT9 981 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 KATNBL1Q9H079 304 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 BRMS1Q9HCU9 246 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 PTCH2Q9Y6C5 1203 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 LRRC37A2A6NM11 1700 aa14.4□□□□□ -0.1
SF3B3-206ENST00000565990 CYP3A7-CYP3A51PA0A087WV96 503 aa14.39□□□□□ -0.11
SF3B3-206ENST00000565990 RBM47A0AV96 593 aaKnown RBP14.39□□□□□ -0.11
SF3B3-206ENST00000565990 H3BQV1 296 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms