RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 NOP9Q86U38 636 aaKnown RBP6.7□□□□□ -1.34
CHD9-215ENST00000565442 CCDC144CPQ8IYA2 1237 aa6.7□□□□□ -1.34
CHD9-215ENST00000565442 ZNF526Q8TF50 670 aaPredicted RBP6.7□□□□□ -1.34
CHD9-215ENST00000565442 MKRN2Q9H000 416 aaKnown RBP6.7□□□□□ -1.34
CHD9-215ENST00000565442 CCDC113Q9H0I3 377 aa6.7□□□□□ -1.34
CHD9-215ENST00000565442 AP5S1Q9NUS5 200 aa6.7□□□□□ -1.34
CHD9-215ENST00000565442 SMARCA5O60264 1052 aaPredicted RBP6.69□□□□□ -1.34
CHD9-215ENST00000565442 FSHBP01225 129 aa6.69□□□□□ -1.34
CHD9-215ENST00000565442 ATF2P15336 505 aa6.69□□□□□ -1.34
CHD9-215ENST00000565442 CTSKP43235 329 aa6.69□□□□□ -1.34
CHD9-215ENST00000565442 MVKQ03426 396 aa6.69□□□□□ -1.34
CHD9-215ENST00000565442 AXDND1Q5T1B0 1012 aaPredicted RBP6.69□□□□□ -1.34
CHD9-215ENST00000565442 DCAF15Q66K64 600 aa6.69□□□□□ -1.34
CHD9-215ENST00000565442 PAQR3Q6TCH7 311 aa6.69□□□□□ -1.34
CHD9-215ENST00000565442 DDX1Q92499 740 aaKnown RBP6.69□□□□□ -1.34
CHD9-215ENST00000565442 PLA2G2DQ9UNK4 145 aa6.69□□□□□ -1.34
CHD9-215ENST00000565442 FAN1Q9Y2M0 1017 aa6.69□□□□□ -1.34
CHD9-215ENST00000565442 A0A1W2PQ27 194 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 A0A1W2PQ64 194 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 A0A1W2PQC6 194 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 A0A1W2PQD8 194 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 C1QTNF3-AMACRE9PGA6 284 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 OVOL3O00110 214 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 SRGAP3O43295 1099 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 NOBOXO60393 691 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 CYBBP04839 570 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 DBHP09172 617 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 DLX2Q07687 328 aaPredicted RBP6.68□□□□□ -1.34
CHD9-215ENST00000565442 CPZQ66K79 652 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 LRP10Q7Z4F1 713 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 TMEM52Q8NDY8 209 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 RBM15Q96T37 977 aaKnown RBP eCLIP6.68□□□□□ -1.341e-6■■□□□ 12.5
CHD9-215ENST00000565442 DNAJC7Q99615 494 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 HCFC2Q9Y5Z7 792 aa6.68□□□□□ -1.34
CHD9-215ENST00000565442 EPHX1P07099 455 aa6.67□□□□□ -1.34
CHD9-215ENST00000565442 VAV1P15498 845 aa6.67□□□□□ -1.34
CHD9-215ENST00000565442 GJA9P57773 515 aa6.67□□□□□ -1.34
CHD9-215ENST00000565442 IFRD2Q12894 506 aaPredicted RBP6.67□□□□□ -1.34
CHD9-215ENST00000565442 RASGRF1Q13972 1273 aa6.67□□□□□ -1.34
CHD9-215ENST00000565442 HEATR6Q6AI08 1181 aaKnown RBP6.67□□□□□ -1.34
CHD9-215ENST00000565442 EEPD1Q7L9B9 569 aa6.67□□□□□ -1.34
CHD9-215ENST00000565442 SORCS2Q96PQ0 1159 aa6.67□□□□□ -1.34
CHD9-215ENST00000565442 HAUS7Q99871 368 aa6.67□□□□□ -1.34
CHD9-215ENST00000565442 RNF38Q9H0F5 515 aa6.67□□□□□ -1.34
CHD9-215ENST00000565442 GFOD1Q9NXC2 390 aa6.67□□□□□ -1.34
CHD9-215ENST00000565442 PFDN2Q9UHV9 154 aa6.67□□□□□ -1.34
CHD9-215ENST00000565442 CBFA2T2O43439 604 aa6.66□□□□□ -1.34
CHD9-215ENST00000565442 SUSD5O60279 629 aa6.66□□□□□ -1.34
CHD9-215ENST00000565442 KRTAP1-1Q07627 177 aa6.66□□□□□ -1.34
CHD9-215ENST00000565442 MTERF2Q49AM1 385 aa6.66□□□□□ -1.34
CHD9-215ENST00000565442 CRTC3Q6UUV7 619 aa6.66□□□□□ -1.34
CHD9-215ENST00000565442 SPATC1Q76KD6 591 aa6.66□□□□□ -1.34
CHD9-215ENST00000565442 CARFQ8N187 725 aa6.66□□□□□ -1.34
CHD9-215ENST00000565442 SMARCC1Q92922 1105 aaPredicted RBP6.66□□□□□ -1.34
CHD9-215ENST00000565442 C1QTNF3Q9BXJ4 246 aa6.66□□□□□ -1.34
CHD9-215ENST00000565442 ZNF451Q9Y4E5 1061 aa6.66□□□□□ -1.34
CHD9-215ENST00000565442 ANKRD34BA5PLL1 514 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 SHOXO15266 292 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 ZNF20P17024 532 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 AUHQ13825 339 aaKnown RBP6.65□□□□□ -1.34
CHD9-215ENST00000565442 SV2CQ496J9 727 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 RTP2Q5QGT7 225 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 ADAT2Q7Z6V5 191 aaKnown RBP6.65□□□□□ -1.34
CHD9-215ENST00000565442 JAZF1Q86VZ6 243 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 C7orf61Q8IZ16 206 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 TTC9BQ8N6N2 239 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 NAT16Q8N8M0 369 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 PPP1R14AQ96A00 147 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 FGD4Q96M96 766 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 FBXL21Q9UKT6 434 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 PCDHB12Q9Y5F1 795 aa6.65□□□□□ -1.34
CHD9-215ENST00000565442 MRPL42Q9Y6G3 142 aaKnown RBP6.65□□□□□ -1.34
CHD9-215ENST00000565442 TLDC2A0PJX2 215 aa6.64□□□□□ -1.35
CHD9-215ENST00000565442 DIAPH1O60610 1272 aaKnown RBP6.64□□□□□ -1.35
CHD9-215ENST00000565442 NCAM1P13591 858 aa6.64□□□□□ -1.35
CHD9-215ENST00000565442 MC3RP41968 323 aa6.64□□□□□ -1.35
CHD9-215ENST00000565442 SLC10A6Q3KNW5 377 aa6.64□□□□□ -1.35
CHD9-215ENST00000565442 HLA-DQA1Q5Y7H0 255 aa6.64□□□□□ -1.35
CHD9-215ENST00000565442 LILRB2Q8N423 598 aa6.64□□□□□ -1.35
CHD9-215ENST00000565442 ST13P5Q8NFI4 369 aaPredicted RBP6.64□□□□□ -1.35
CHD9-215ENST00000565442 C8orf49Q96NF6 230 aa6.64□□□□□ -1.35
CHD9-215ENST00000565442 APBA2Q99767 749 aa6.64□□□□□ -1.35
CHD9-215ENST00000565442 KLHL25Q9H0H3 589 aa6.64□□□□□ -1.35
CHD9-215ENST00000565442 TMA7Q9Y2S6 64 aaKnown RBP6.64□□□□□ -1.35
CHD9-215ENST00000565442 A0A1W2PQJ5 194 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 CD247P20963 164 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 HMGA2P52926 109 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 PRR5P85299 388 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 SSRP1Q08945 709 aaKnown RBP6.63□□□□□ -1.35
CHD9-215ENST00000565442 TCEAL1Q15170 157 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 ANKRD39Q53RE8 183 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 BICRALQ6AI39 1079 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 JAMLQ86YT9 394 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 ADCY4Q8NFM4 1077 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 BRF1Q92994 677 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 LOXL4Q96JB6 756 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 SAMD11Q96NU1 681 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 LGR4Q9BXB1 951 aa6.63□□□□□ -1.35
CHD9-215ENST00000565442 SCAND2PQ9GZW5 306 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms