RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 NKRFO15226 690 aaKnown RBP eCLIP10.05□□□□□ -0.8
CAPN3-213ENST00000565173 MYL3P08590 195 aa10.05□□□□□ -0.8
CAPN3-213ENST00000565173 SUPT20HL2P0C7V6 817 aa10.05□□□□□ -0.8
CAPN3-213ENST00000565173 TXNP10599 105 aaKnown RBP10.05□□□□□ -0.8
CAPN3-213ENST00000565173 ADGRE1Q14246 886 aa10.05□□□□□ -0.8
CAPN3-213ENST00000565173 PPP2R5BQ15173 497 aa10.05□□□□□ -0.8
CAPN3-213ENST00000565173 CDC37Q16543 378 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-213ENST00000565173 CCDC178Q5BJE1 867 aa10.05□□□□□ -0.8
CAPN3-213ENST00000565173 NFRKBQ6P4R8 1299 aa10.05□□□□□ -0.8
CAPN3-213ENST00000565173 IQCA1Q86XH1 822 aa10.05□□□□□ -0.8
CAPN3-213ENST00000565173 SYTL5Q8TDW5 730 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-213ENST00000565173 PPP1R13LQ8WUF5 828 aa10.05□□□□□ -0.8
CAPN3-213ENST00000565173 TAAR1Q96RJ0 339 aa10.05□□□□□ -0.8
CAPN3-213ENST00000565173 PRDM12Q9H4Q4 367 aa10.05□□□□□ -0.8
CAPN3-213ENST00000565173 LAMA4Q16363 1823 aa10.05□□□□□ -0.8
CAPN3-213ENST00000565173 SCN10AQ9Y5Y9 1956 aa10.05□□□□□ -0.8
CAPN3-213ENST00000565173 KPNA6O60684 536 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 RABGGTBP53611 331 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 TTLL4Q14679 1199 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 RAB30Q15771 203 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 IMMTQ16891 758 aaKnown RBP10.04□□□□□ -0.8
CAPN3-213ENST00000565173 LY6KQ17RY6 165 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 QRICH1Q2TAL8 776 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 ASPRV1Q53RT3 343 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 RPUSD2Q8IZ73 545 aaKnown RBP10.04□□□□□ -0.8
CAPN3-213ENST00000565173 NKX2-4Q9H2Z4 354 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 KAT14Q9H8E8 782 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 JMJD4Q9H9V9 463 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 PRDM6Q9NQX0 595 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 GPHNQ9NQX3 736 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-213ENST00000565173 DIAPH3Q9NSV4 1193 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 MSRAQ9UJ68 235 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 ABCB11O95342 1321 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 TTC28Q96AY4 2481 aa10.04□□□□□ -0.8
CAPN3-213ENST00000565173 B4DLN1 442 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 HIP1O00291 1037 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 OPLAHO14841 1288 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 PARP1P09874 1014 aaKnown RBP10.03□□□□□ -0.8
CAPN3-213ENST00000565173 IQCF3P0C7M6 154 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 MYOGP15173 224 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 PDE4AP27815 886 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 MRPL12P52815 198 aaKnown RBP10.03□□□□□ -0.8
CAPN3-213ENST00000565173 PTPN11Q06124 597 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-213ENST00000565173 ARHGAP1Q07960 439 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 SEC23AQ15436 765 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 SEPT14Q6ZU15 432 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 MCF2L2Q86YR7 1114 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 STAG2Q8N3U4 1231 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 NSUN6Q8TEA1 469 aaKnown RBP10.03□□□□□ -0.8
CAPN3-213ENST00000565173 AFG1LQ8WV93 481 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 KAT2BQ92831 832 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 MTMR8Q96EF0 704 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 YTHDC1Q96MU7 727 aaKnown RBP10.03□□□□□ -0.8
CAPN3-213ENST00000565173 CTAGE1Q96RT6 745 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 IWS1Q96ST2 819 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 MPHOSPH6Q99547 160 aaKnown RBP10.03□□□□□ -0.8
CAPN3-213ENST00000565173 MTIF3Q9H2K0 278 aaKnown RBP10.03□□□□□ -0.8
CAPN3-213ENST00000565173 VAT1LQ9HCJ6 419 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 CTNNA3Q9UI47 895 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 DDX41Q9UJV9 622 aaKnown RBP10.03□□□□□ -0.8
CAPN3-213ENST00000565173 PCDHA11Q9Y5I1 949 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 SLC4A7Q9Y6M7 1214 aa10.03□□□□□ -0.8
CAPN3-213ENST00000565173 GBF1Q92538 1859 aa10.02□□□□□ -0.8
CAPN3-213ENST00000565173 PITPNM1O00562 1244 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 PPP1R11O60927 126 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-213ENST00000565173 PFKMP08237 780 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 MMP3P08254 477 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 GSPT1P15170 499 aaKnown RBP10.02□□□□□ -0.81
CAPN3-213ENST00000565173 HSD17B4P51659 736 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 GHRHRQ02643 423 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 GPNMBQ14956 572 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 STXBP2Q15833 593 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 SLC35G1Q2M3R5 365 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 BRDTQ58F21 947 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-213ENST00000565173 FAM47CQ5HY64 1035 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 CYB5R4Q7L1T6 521 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 DEFB128Q7Z7B8 93 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 SESTD1Q86VW0 696 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 FBXO11Q86XK2 927 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 RMDN3Q96TC7 470 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 GAS2L1Q99501 681 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-213ENST00000565173 KRT23Q9C075 422 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 CNNM2Q9H8M5 875 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 SLC28A3Q9HAS3 691 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 MAD2L2Q9UI95 211 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 MRPL11Q9Y3B7 192 aaKnown RBP10.02□□□□□ -0.81
CAPN3-213ENST00000565173 RAD50Q92878 1312 aa10.02□□□□□ -0.81
CAPN3-213ENST00000565173 SCN5AQ14524 2016 aa10.01□□□□□ -0.81
CAPN3-213ENST00000565173 PALM3A6NDB9 673 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-213ENST00000565173 EIF3JO75822 258 aaKnown RBP10.01□□□□□ -0.81
CAPN3-213ENST00000565173 GH1P01241 217 aa10.01□□□□□ -0.81
CAPN3-213ENST00000565173 ATP2A2P16615 1042 aaKnown RBP10.01□□□□□ -0.81
CAPN3-213ENST00000565173 RFC2P35250 354 aa10.01□□□□□ -0.81
CAPN3-213ENST00000565173 TJAP1Q5JTD0 557 aa10.01□□□□□ -0.81
CAPN3-213ENST00000565173 IFIT1BQ5T764 474 aaKnown RBP10.01□□□□□ -0.81
CAPN3-213ENST00000565173 GDF6Q6KF10 455 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-213ENST00000565173 STOX1Q6ZVD7 989 aa10.01□□□□□ -0.81
CAPN3-213ENST00000565173 PPM1EQ8WY54 764 aa10.01□□□□□ -0.81
CAPN3-213ENST00000565173 SYMPKQ92797 1274 aaKnown RBP10.01□□□□□ -0.81
CAPN3-213ENST00000565173 EMID1Q96A84 441 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms