RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 CCDC62Q6P9F0 684 aa17.15■□□□□ 0.34
USB1-210ENST00000565151 GUCD1Q96NT3 240 aa17.15■□□□□ 0.34
USB1-210ENST00000565151 ESYT1Q9BSJ8 1104 aa17.15■□□□□ 0.34
USB1-210ENST00000565151 RIOX1Q9H6W3 641 aa17.15■□□□□ 0.34
USB1-210ENST00000565151 CHD7Q9P2D1 2997 aa17.14■□□□□ 0.33
USB1-210ENST00000565151 PTPRSQ13332 1948 aa17.14■□□□□ 0.33
USB1-210ENST00000565151 REV3LO60673 3130 aa17.14■□□□□ 0.33
USB1-210ENST00000565151 CYP2C18P33260 490 aa17.14■□□□□ 0.33
USB1-210ENST00000565151 PURAQ00577 322 aaKnown RBP17.14■□□□□ 0.33
USB1-210ENST00000565151 FAM109BQ6ICB4 259 aaPredicted RBP17.14■□□□□ 0.33
USB1-210ENST00000565151 OR6J1Q8NGC5 347 aa17.14■□□□□ 0.33
USB1-210ENST00000565151 NCOA7Q8NI08 942 aa17.14■□□□□ 0.33
USB1-210ENST00000565151 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.14■□□□□ 0.33
USB1-210ENST00000565151 LY9Q9HBG7 655 aa17.14■□□□□ 0.33
USB1-210ENST00000565151 TANC1Q9C0D5 1861 aa17.14■□□□□ 0.33
USB1-210ENST00000565151 MYO9BQ13459 2157 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 DHX16O60231 1041 aaKnown RBP17.13■□□□□ 0.33
USB1-210ENST00000565151 B4GALT4O60513 344 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 CSF2RAP15509 400 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 HSD17B4P51659 736 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 FPGSQ05932 587 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 TRDNQ13061 729 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 WTAPQ15007 396 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 NECTIN1Q15223 517 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 MFSD5Q6N075 450 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 IL31RAQ8NI17 732 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 FAM161BQ96MY7 647 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 PIGSQ96S52 555 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 MYL10Q9BUA6 226 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 PPP1R12CQ9BZL4 782 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 MROH7Q68CQ1 1323 aa17.13■□□□□ 0.33
USB1-210ENST00000565151 A6NJR5 290 aa17.12■□□□□ 0.33
USB1-210ENST00000565151 SLC27A2O14975 620 aa17.12■□□□□ 0.33
USB1-210ENST00000565151 ZBTB5O15062 677 aa17.12■□□□□ 0.33
USB1-210ENST00000565151 RGS20O76081 388 aa17.12■□□□□ 0.33
USB1-210ENST00000565151 EIF2AK2P19525 551 aaKnown RBP17.12■□□□□ 0.33
USB1-210ENST00000565151 LY6KQ17RY6 165 aa17.12■□□□□ 0.33
USB1-210ENST00000565151 TMEM67Q5HYA8 995 aa17.12■□□□□ 0.33
USB1-210ENST00000565151 TMEM240Q5SV17 173 aa17.12■□□□□ 0.33
USB1-210ENST00000565151 SCFD2Q8WU76 684 aa17.12■□□□□ 0.33
USB1-210ENST00000565151 RMDN3Q96TC7 470 aa17.12■□□□□ 0.33
USB1-210ENST00000565151 AMNQ9BXJ7 453 aa17.12■□□□□ 0.33
USB1-210ENST00000565151 TTYH1Q9H313 450 aaPredicted RBP17.12■□□□□ 0.33
USB1-210ENST00000565151 PXMP2Q9NR77 195 aa17.12■□□□□ 0.33
USB1-210ENST00000565151 MRPL11Q9Y3B7 192 aaKnown RBP17.12■□□□□ 0.33
USB1-210ENST00000565151 CABYRO75952 493 aa17.11■□□□□ 0.33
USB1-210ENST00000565151 CFBP00751 764 aa17.11■□□□□ 0.33
USB1-210ENST00000565151 MYL3P08590 195 aa17.11■□□□□ 0.33
USB1-210ENST00000565151 ACRP10323 421 aa17.11■□□□□ 0.33
USB1-210ENST00000565151 TXNP10599 105 aaKnown RBP17.11■□□□□ 0.33
USB1-210ENST00000565151 HOXA13P31271 388 aaPredicted RBP17.11■□□□□ 0.33
USB1-210ENST00000565151 ARHGAP1Q07960 439 aa17.11■□□□□ 0.33
USB1-210ENST00000565151 PPP2R5BQ15173 497 aa17.11■□□□□ 0.33
USB1-210ENST00000565151 RASIP1Q5U651 963 aa17.11■□□□□ 0.33
USB1-210ENST00000565151 CREB3L3Q68CJ9 461 aa17.11■□□□□ 0.33
USB1-210ENST00000565151 RALYLQ86SE5 291 aaKnown RBP17.11■□□□□ 0.33
USB1-210ENST00000565151 HOMER1Q86YM7 354 aa17.11■□□□□ 0.33
USB1-210ENST00000565151 NSUN6Q8TEA1 469 aaKnown RBP17.11■□□□□ 0.33
USB1-210ENST00000565151 ZFP91Q96JP5 570 aaPredicted RBP17.11■□□□□ 0.33
USB1-210ENST00000565151 NOC4LQ9BVI4 516 aaKnown RBP17.11■□□□□ 0.33
USB1-210ENST00000565151 WNT8AQ9H1J5 351 aa17.11■□□□□ 0.33
USB1-210ENST00000565151 ALDH8A1Q9H2A2 487 aaPredicted RBP17.11■□□□□ 0.33
USB1-210ENST00000565151 TRMT13Q9NUP7 481 aaKnown RBP17.11■□□□□ 0.33
USB1-210ENST00000565151 PCDHA1Q9Y5I3 950 aa17.11■□□□□ 0.33
USB1-210ENST00000565151 BMP2KLQ5H9B9 411 aa17.1■□□□□ 0.33
USB1-210ENST00000565151 SEPT14Q6ZU15 432 aa17.1■□□□□ 0.33
USB1-210ENST00000565151 CENPQQ7L2Z9 268 aaPredicted RBP17.1■□□□□ 0.33
USB1-210ENST00000565151 RNPC3Q96LT9 517 aaKnown RBP17.1■□□□□ 0.33
USB1-210ENST00000565151 CTAGE1Q96RT6 745 aa17.1■□□□□ 0.33
USB1-210ENST00000565151 MAF1Q9H063 256 aa17.1■□□□□ 0.33
USB1-210ENST00000565151 GRXCR1A8MXD5 290 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 SH2B2O14492 632 aaPredicted RBP17.09■□□□□ 0.33
USB1-210ENST00000565151 PRC1O43663 620 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 ZEB2O60315 1214 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 NR3C2P08235 984 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 SMAD3P84022 425 aaKnown RBP17.09■□□□□ 0.33
USB1-210ENST00000565151 NBPF20Q3BBV1 942 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 ZNF365Q70YC5 407 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 MCF2L2Q86YR7 1114 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 ZNF654Q8IZM8 581 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 AFG1LQ8WV93 481 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 PIBF1Q8WXW3 757 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 KAT2BQ92831 832 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 GPKOWQ92917 476 aaPredicted RBP eCLIP17.09■□□□□ 0.33
USB1-210ENST00000565151 IWS1Q96ST2 819 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 PDCD2LQ9BRP1 358 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 LRRC2Q9BYS8 371 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 SEMA6BQ9H3T3 888 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 BCAS3Q9H6U6 928 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 DDX41Q9UJV9 622 aaKnown RBP17.09■□□□□ 0.33
USB1-210ENST00000565151 STXBP5LQ9Y2K9 1186 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 VCANP13611 3396 aa17.09■□□□□ 0.33
USB1-210ENST00000565151 NKRFO15226 690 aaKnown RBP eCLIP17.08■□□□□ 0.32
USB1-210ENST00000565151 TLR3O15455 904 aaKnown RBP17.08■□□□□ 0.32
USB1-210ENST00000565151 PLEKHA8P1O95397 391 aa17.08■□□□□ 0.32
USB1-210ENST00000565151 CYP2C9P11712 490 aa17.08■□□□□ 0.32
USB1-210ENST00000565151 RXRAP19793 462 aa17.08■□□□□ 0.32
USB1-210ENST00000565151 CPT1AP50416 773 aa17.08■□□□□ 0.32
USB1-210ENST00000565151 CCL23P55773 120 aa17.08■□□□□ 0.32
USB1-210ENST00000565151 TTLL4Q14679 1199 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms