RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 KIF23Q02241 960 aaPredicted RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 TMEM266Q2M3C6 531 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 DNAJC21Q5F1R6 531 aaKnown RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 ZSWIM2Q8NEG5 633 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 PIGOQ8TEQ8 1089 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 SEPT11Q9NVA2 429 aaKnown RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 USP17L10C9JJH3 530 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 CSDE1O75534 798 aaKnown RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 BAG3O95817 575 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 TRIM28Q13263 835 aaKnown RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 TNFAIP1Q13829 316 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 ANKRD13CQ8N6S4 541 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 TMEM87AQ8NBN3 555 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 USP40Q9NVE5 1235 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 AKR1B1P15121 316 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 METTL16Q86W50 562 aaKnown RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 TRPV6Q9H1D0 765 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 CTNND2Q9UQB3 1225 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 PCDHA5Q9Y5H7 936 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 SLC37A4O43826 429 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 PRPF6O94906 941 aaKnown RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 CFAP100Q494V2 611 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 ZNF444Q8N0Y2 327 aaPredicted RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 FANCBQ8NB91 859 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 LINC00301Q8NCQ3 95 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 SCLT1Q96NL6 688 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 EHD2Q9NZN4 543 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 SOWAHDA6NJG2 315 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 IRX5P78411 483 aaPredicted RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 SPECC1LQ69YQ0 1117 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 PNMA1Q8ND90 353 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 DDX27Q96GQ7 796 aaKnown RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 ZC3H12CQ9C0D7 883 aaKnown RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 SLC39A2Q9NP94 309 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 H0YHG0 523 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 PPEF1O14829 653 aaPredicted RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 CAPN15O75808 1086 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 SLC8A3P57103 927 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 SEPT2Q15019 361 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 SCARA3Q6AZY7 606 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 DUSP10Q9Y6W6 482 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 PRELPP51888 382 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 ZNF445P59923 1031 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 KRT83P78385 493 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 SEZ6Q53EL9 994 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 CDR2LQ86X02 465 aaPredicted RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 TTC39CQ8N584 583 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 EFHBQ8N7U6 833 aa3.73□□□□□ -1.81
CHD9-213ENST00000564845 SUDS3Q9H7L9 328 aaPredicted RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 TNRC6CQ9HCJ0 1690 aaKnown RBP3.73□□□□□ -1.81
CHD9-213ENST00000564845 YDJCA8MPS7 323 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 HOXB6P17509 224 aaKnown RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 ALDH3A1P30838 453 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 CDK8P49336 464 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 C2CD6Q53TS8 623 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 C2CD5Q86YS7 1000 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 P2RX7Q99572 595 aaKnown RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 TTC1Q99614 292 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 TRIM62Q9BVG3 475 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.72□□□□□ -1.81
CHD9-213ENST00000564845 SUGCTQ9HAC7 445 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 BSDC1Q9NW68 430 aaPredicted RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 HYOU1Q9Y4L1 999 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 WNK3Q9BYP7 1800 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 SRGAP2O75044 1071 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 ABL2P42684 1182 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 KCNA1Q09470 495 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 HACE1Q8IYU2 909 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 DOCK2Q92608 1830 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 POLRMTO00411 1230 aaKnown RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 RASSF2P50749 326 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 TRIM14Q14142 442 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 KCNK18Q7Z418 384 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 ANKS4BQ8N8V4 417 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 PRPF38AQ8NAV1 312 aaKnown RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 FBXO18Q8NFZ0 1043 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 MORC4Q8TE76 937 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 RAB3IPQ96QF0 476 aaPredicted RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 C4AP0C0L4 1744 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 ANKRD65E5RJM6 399 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 RIOK3O14730 519 aaKnown RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 SLC26A4O43511 780 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 ANO1Q5XXA6 986 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 AFAP1L2Q8N4X5 818 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 ACER1Q8TDN7 264 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 MICAL1Q8TDZ2 1067 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 EYA3Q99504 573 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 GGA1Q9UJY5 639 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 NHSQ6T4R5 1651 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 PPP1R11O60927 126 aaPredicted RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 SEC31AO94979 1220 aaKnown RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 CXCR5P32302 372 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 SYT10Q6XYQ8 523 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 CRACR2BQ8N4Y2 399 aaPredicted RBP3.72□□□□□ -1.81
CHD9-213ENST00000564845 DSCC1Q9BVC3 393 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 KAT14Q9H8E8 782 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 PRR12Q9ULL5 1215 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 KIAA0754O94854 1291 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 SYKP43405 635 aa3.72□□□□□ -1.81
CHD9-213ENST00000564845 TOGARAM2Q6ZUX3 1019 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms