RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 PLAGL2Q9UPG8 496 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 LEMD3Q9Y2U8 911 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 USP17L5A8MUK1 530 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 SYF2O95926 243 aaKnown RBP17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 LDHCP07864 332 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 CDK17Q00537 523 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 C2orf54Q08AI8 447 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 SPA17Q15506 151 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 LEKR1Q6ZMV7 388 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 RPGRIP1Q96KN7 1286 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 ACBD3Q9H3P7 528 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 NDST4Q9H3R1 872 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 ZNF287Q9HBT7 754 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 MED4Q9NPJ6 270 aa17.23■□□□□ 0.35
GTF3C1-205ENST00000564747 SNED1Q8TER0 1413 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 ANO9A1A5B4 782 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 VWA3BQ502W6 1294 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 TEX11Q8IYF3 940 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 RASSF4Q9H2L5 321 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 FAM204AQ9H8W3 233 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 VIPAS39Q9H9C1 493 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 HPCAL4Q9UM19 191 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 SIK3Q9Y2K2 1263 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 CAPN6Q9Y6Q1 641 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 TARSL2A2RTX5 802 aaKnown RBP17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 MYO1CO00159 1063 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 PPP1R2P41236 205 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 MAPK8IP2Q13387 824 aaPredicted RBP17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 RC3H1Q5TC82 1133 aaKnown RBP17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 ZNF804AQ7Z570 1209 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 DRC1Q96MC2 740 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 PNMA5Q96PV4 448 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 MTMR9Q96QG7 549 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 MMRN2Q9H8L6 949 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 MLXIPQ9HAP2 919 aa17.22■□□□□ 0.35
GTF3C1-205ENST00000564747 SLC37A4O43826 429 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 RNF40O75150 1001 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 MCM3P25205 808 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 GRAPQ13588 217 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 CALCRLQ16602 461 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 COBLL1Q53SF7 1204 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 GRAPLQ8TC17 118 aaPredicted RBP17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 RIN2Q8WYP3 895 aaPredicted RBP17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 COA7Q96BR5 231 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 IFIH1Q9BYX4 1025 aaKnown RBP17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 LCMT1Q9UIC8 334 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 PCDHA13Q9Y5I0 950 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 FRMPD2Q68DX3 1309 aaPredicted RBP17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 EDIL3O43854 480 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 EIF4A3P38919 411 aaKnown RBP17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 MAP9Q49MG5 647 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 CREG2Q8IUH2 290 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 COG1Q8WTW3 980 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 NUDT12Q9BQG2 462 aa17.21■□□□□ 0.35
GTF3C1-205ENST00000564747 AHDC1Q5TGY3 1603 aaPredicted RBP17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 ZC3H4Q9UPT8 1303 aaKnown RBP17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 POTEMA6NI47 508 aa17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 TDP2O95551 362 aa17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 HNRNPH3P31942 346 aaKnown RBP17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 AARSP49588 968 aaKnown RBP eCLIP17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 ATP2B2Q01814 1243 aa17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 FOXR1Q6PIV2 292 aa17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 CCNI2Q6ZMN8 369 aaPredicted RBP17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 UNC13DQ70J99 1090 aa17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 GLIS3Q8NEA6 775 aa17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 LARP4BQ92615 738 aaKnown RBP17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 ZFP91Q96JP5 570 aaPredicted RBP17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 SNX12Q9UMY4 172 aa17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 NAV1Q8NEY1 1877 aa17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 MOCS3O95396 460 aa17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 KIF11P52732 1056 aa17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 C10orf67Q8IYJ2 551 aa17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 TSGA10Q9BZW7 698 aa17.2■□□□□ 0.34
GTF3C1-205ENST00000564747 USO1O60763 962 aaKnown RBP17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 LRRC41Q15345 812 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 RRAGAQ7L523 313 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 TRIM58Q8NG06 486 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 CDK5RAP3Q96JB5 506 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 SH2D4AQ9H788 454 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 JRKLQ9Y4A0 524 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 GPR75-ASB3A0A0A6YYF3 556 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 EZH2Q15910 746 aaKnown RBP17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 KCNK18Q7Z418 384 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 SRLQ86TD4 932 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 CCDC155Q8N6L0 562 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 PSMB7Q99436 277 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 DEF6Q9H4E7 631 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 CD209Q9NNX6 404 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 SBF2Q86WG5 1849 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 MYH10P35580 1976 aa17.19■□□□□ 0.34
GTF3C1-205ENST00000564747 PVALEFA0A1B0GWK0 134 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 LRRC53A6NM62 1247 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 TACC1O75410 805 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 PRPF6O94906 941 aaKnown RBP17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 IVLP07476 585 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 GPSM2P81274 684 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 MRPS25P82663 173 aaKnown RBP17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 MAN2A1Q16706 1144 aa17.18■□□□□ 0.34
GTF3C1-205ENST00000564747 HDAC7Q8WUI4 952 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms