RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 MSL3Q8N5Y2 521 aaKnown RBP17.03■□□□□ 0.32
HERC2-207ENST00000564734 COA7Q96BR5 231 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 EEF2KMTQ96G04 330 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 TFR2Q9UP52 801 aa17.03■□□□□ 0.32
HERC2-207ENST00000564734 EIF3CLB5ME19 914 aaKnown RBP17.02■□□□□ 0.32
HERC2-207ENST00000564734 ST5P78524 1137 aa17.02■□□□□ 0.32
HERC2-207ENST00000564734 CALCRLQ16602 461 aa17.02■□□□□ 0.32
HERC2-207ENST00000564734 TSR1Q2NL82 804 aaKnown RBP17.02■□□□□ 0.32
HERC2-207ENST00000564734 PAPD7Q5XG87 772 aaKnown RBP17.02■□□□□ 0.32
HERC2-207ENST00000564734 CCDC170Q8IYT3 715 aa17.02■□□□□ 0.32
HERC2-207ENST00000564734 EIF3CQ99613 913 aaKnown RBP17.02■□□□□ 0.32
HERC2-207ENST00000564734 RCCD1A6NED2 376 aa17.02■□□□□ 0.31
HERC2-207ENST00000564734 PDIA5Q14554 519 aa17.02■□□□□ 0.31
HERC2-207ENST00000564734 UNC13DQ70J99 1090 aa17.02■□□□□ 0.31
HERC2-207ENST00000564734 NOC4LQ9BVI4 516 aaKnown RBP17.02■□□□□ 0.31
HERC2-207ENST00000564734 NHEJ1Q9H9Q4 299 aaPredicted RBP17.02■□□□□ 0.31
HERC2-207ENST00000564734 STK32BQ9NY57 414 aa17.02■□□□□ 0.31
HERC2-207ENST00000564734 LRWD1Q9UFC0 647 aa17.02■□□□□ 0.31
HERC2-207ENST00000564734 L1RE1Q9UN81 338 aa17.02■□□□□ 0.31
HERC2-207ENST00000564734 KLRG2A4D1S0 409 aaPredicted RBP17.01■□□□□ 0.31
HERC2-207ENST00000564734 POLR3GO15318 223 aaPredicted RBP17.01■□□□□ 0.31
HERC2-207ENST00000564734 TDP2O95551 362 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 AKR1B1P15121 316 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 ADCY7P51828 1080 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 MCM6Q14566 821 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 NCAPH2Q6IBW4 605 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 NOA1Q8NC60 698 aaKnown RBP17.01■□□□□ 0.31
HERC2-207ENST00000564734 PURBQ96QR8 312 aaKnown RBP17.01■□□□□ 0.31
HERC2-207ENST00000564734 CRAMP1Q96RY5 1269 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 ZCCHC17Q9NP64 241 aaKnown RBP17.01■□□□□ 0.31
HERC2-207ENST00000564734 SLC39A2Q9NP94 309 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 C10orf71Q711Q0 1435 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 UBR3Q6ZT12 1888 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 TRIM21P19474 475 aaKnown RBP17.01■□□□□ 0.31
HERC2-207ENST00000564734 MTIF2P46199 727 aaKnown RBP17.01■□□□□ 0.31
HERC2-207ENST00000564734 ABCB6Q9NP58 842 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 LRRC37AA6NMS7 1700 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 HNRNPH3P31942 346 aaKnown RBP17.01■□□□□ 0.31
HERC2-207ENST00000564734 CYLC1P35663 651 aaPredicted RBP17.01■□□□□ 0.31
HERC2-207ENST00000564734 CLK2P49760 499 aaKnown RBP17.01■□□□□ 0.31
HERC2-207ENST00000564734 EHHADHQ08426 723 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 CCDC122Q5T0U0 273 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 CAMKK2Q96RR4 588 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 LACRTQ9GZZ8 138 aa17.01■□□□□ 0.31
HERC2-207ENST00000564734 ATP1A1P05023 1023 aaKnown RBP17■□□□□ 0.31
HERC2-207ENST00000564734 VSNL1P62760 191 aa17■□□□□ 0.31
HERC2-207ENST00000564734 TMEM119Q4V9L6 283 aa17■□□□□ 0.31
HERC2-207ENST00000564734 LRRC47Q8N1G4 583 aaKnown RBP17■□□□□ 0.31
HERC2-207ENST00000564734 LARP4BQ92615 738 aaKnown RBP17■□□□□ 0.31
HERC2-207ENST00000564734 RAD54LQ92698 747 aa17■□□□□ 0.31
HERC2-207ENST00000564734 NUDT12Q9BQG2 462 aa17■□□□□ 0.31
HERC2-207ENST00000564734 JMJD4Q9H9V9 463 aa17■□□□□ 0.31
HERC2-207ENST00000564734 DDX4Q9NQI0 724 aaKnown RBP17■□□□□ 0.31
HERC2-207ENST00000564734 SIK3Q9Y2K2 1263 aa17■□□□□ 0.31
HERC2-207ENST00000564734 H3BQF6 201 aa17■□□□□ 0.31
HERC2-207ENST00000564734 PPP1R11O60927 126 aaPredicted RBP17■□□□□ 0.31
HERC2-207ENST00000564734 PPP1R18Q6NYC8 613 aa17■□□□□ 0.31
HERC2-207ENST00000564734 JAKMIP2Q96AA8 810 aa17■□□□□ 0.31
HERC2-207ENST00000564734 IQCDQ96DY2 449 aa17■□□□□ 0.31
HERC2-207ENST00000564734 RIC8AQ9NPQ8 531 aa17■□□□□ 0.31
HERC2-207ENST00000564734 HDAC6Q9UBN7 1215 aa17■□□□□ 0.31
HERC2-207ENST00000564734 RHOXF2BP0C7M4 288 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 ZNF543Q08ER8 600 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 PPP4R3AQ6IN85 833 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 GUF1Q8N442 669 aaKnown RBP16.99■□□□□ 0.31
HERC2-207ENST00000564734 RHOXF2Q9BQY4 288 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 PDGFDQ9GZP0 370 aaPredicted RBP16.99■□□□□ 0.31
HERC2-207ENST00000564734 ABCB11O95342 1321 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 A0A0U1RQG5 324 aaPredicted RBP16.99■□□□□ 0.31
HERC2-207ENST00000564734 ENC1O14682 589 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 TUBBP07437 444 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 GTF2IP78347 998 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 VWA3BQ502W6 1294 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 WDR93Q6P2C0 686 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 DPP8Q6V1X1 898 aaPredicted RBP16.99■□□□□ 0.31
HERC2-207ENST00000564734 HDXQ7Z353 690 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 ZNHIT6Q9NWK9 470 aaKnown RBP16.99■□□□□ 0.31
HERC2-207ENST00000564734 SUGT1Q9Y2Z0 365 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 PNMA6FA0A0J9YX94 578 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 ZNF263O14978 683 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 HOXA7P31268 230 aaPredicted RBP16.99■□□□□ 0.31
HERC2-207ENST00000564734 DDR1Q08345 913 aa16.99■□□□□ 0.31
HERC2-207ENST00000564734 QSER1Q2KHR3 1735 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 KRT86O43790 486 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 ERLIN1O75477 346 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 TMEM266Q2M3C6 531 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 FOXR2Q6PJQ5 311 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 KCNK18Q7Z418 384 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 CLEC10AQ8IUN9 316 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 ADGRF4Q8IZF3 695 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 CERS5Q8N5B7 392 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 EHBP1Q8NDI1 1231 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 GPCPD1Q9NPB8 672 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 MYO3BQ8WXR4 1341 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 POTEMA6NI47 508 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 PICALMQ13492 652 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 ECM1Q16610 540 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 FKBP15Q5T1M5 1219 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 KIAA1328Q86T90 577 aa16.98■□□□□ 0.31
HERC2-207ENST00000564734 MTMR8Q96EF0 704 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms