RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 IQSEC1Q6DN90 963 aa11.48□□□□□ -0.57
CDH1-206ENST00000564676 SAMD3Q8N6K7 520 aa11.48□□□□□ -0.57
CDH1-206ENST00000564676 RMDN3Q96TC7 470 aa11.48□□□□□ -0.57
CDH1-206ENST00000564676 TM6SF1Q9BZW5 370 aa11.48□□□□□ -0.57
CDH1-206ENST00000564676 PDGFCQ9NRA1 345 aa11.48□□□□□ -0.57
CDH1-206ENST00000564676 MAP3K20Q9NYL2 800 aaKnown RBP11.48□□□□□ -0.57
CDH1-206ENST00000564676 COL20A1Q9P218 1284 aa11.48□□□□□ -0.57
CDH1-206ENST00000564676 NR2E3Q9Y5X4 410 aa11.48□□□□□ -0.57
CDH1-206ENST00000564676 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.47□□□□□ -0.57
CDH1-206ENST00000564676 OPLAHO14841 1288 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 C6orf222P0C671 652 aaPredicted RBP11.47□□□□□ -0.57
CDH1-206ENST00000564676 COL6A1P12109 1028 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 SMPD1P17405 629 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 EIF2AK2P19525 551 aaKnown RBP11.47□□□□□ -0.57
CDH1-206ENST00000564676 EDNRBP24530 442 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 ATN1P54259 1190 aaPredicted RBP11.47□□□□□ -0.57
CDH1-206ENST00000564676 PPP2R5BQ15173 497 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 TAPT1Q6NXT6 567 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 FCHSD1Q86WN1 690 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 FBXL16Q8N461 479 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 CUL5Q93034 780 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 FERMT2Q96AC1 680 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 IWS1Q96ST2 819 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 UPF3BQ9BZI7 483 aaKnown RBP11.47□□□□□ -0.57
CDH1-206ENST00000564676 AP5M1Q9H0R1 490 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 PDRG1Q9NUG6 133 aa11.47□□□□□ -0.57
CDH1-206ENST00000564676 V9GY48 417 aaPredicted RBP11.47□□□□□ -0.57
CDH1-206ENST00000564676 MKI67P46013 3256 aaKnown RBP11.47□□□□□ -0.57
CDH1-206ENST00000564676 CNTNAP5Q8WYK1 1306 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 SYNRGQ9UMZ2 1314 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 H0YGN5 161 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 DYNC1LI2O43237 492 aaPredicted RBP11.46□□□□□ -0.57
CDH1-206ENST00000564676 ADCY6O43306 1168 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 ADAMTS4O75173 837 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 NR3C2P08235 984 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 MYCLP12524 364 aaPredicted RBP11.46□□□□□ -0.57
CDH1-206ENST00000564676 CDC27P30260 824 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 ADD1P35611 737 aaKnown RBP11.46□□□□□ -0.57
CDH1-206ENST00000564676 GJA9P57773 515 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 GHRHRQ02643 423 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 STXBP2Q15833 593 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 GNASQ5JWF2 1037 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 SEPT14Q6ZU15 432 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 HEATR3Q7Z4Q2 680 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 TLK2Q86UE8 772 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 C7orf61Q8IZ16 206 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 KLHDC9Q8NEP7 349 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 SMARCC2Q8TAQ2 1214 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 TSEN34Q9BSV6 310 aaKnown RBP11.46□□□□□ -0.57
CDH1-206ENST00000564676 AGXT2Q9BYV1 514 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 WDR11Q9BZH6 1224 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 PXMP2Q9NR77 195 aa11.46□□□□□ -0.57
CDH1-206ENST00000564676 FAM217BQ9NTX9 383 aaPredicted RBP11.46□□□□□ -0.57
CDH1-206ENST00000564676 GNEQ9Y223 722 aaKnown RBP11.46□□□□□ -0.57
CDH1-206ENST00000564676 RBM47A0AV96 593 aaKnown RBP11.45□□□□□ -0.58
CDH1-206ENST00000564676 MYADML2A6NDP7 307 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 SEC24BO95487 1268 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 ANAPC15P60006 121 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 CCT2P78371 535 aaKnown RBP11.45□□□□□ -0.58
CDH1-206ENST00000564676 IRX5P78411 483 aaPredicted RBP11.45□□□□□ -0.58
CDH1-206ENST00000564676 AKAP17AQ02040 695 aaKnown RBP11.45□□□□□ -0.58
CDH1-206ENST00000564676 TTLL4Q14679 1199 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 KCNA10Q16322 511 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 LRRC26Q2I0M4 334 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 DUSP28Q4G0W2 176 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 SLC39A5Q6ZMH5 540 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 PCSK9Q8NBP7 692 aaKnown RBP11.45□□□□□ -0.58
CDH1-206ENST00000564676 SCFD2Q8WU76 684 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 GPKOWQ92917 476 aaPredicted RBP eCLIP11.45□□□□□ -0.58
CDH1-206ENST00000564676 VTI1AQ96AJ9 217 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 LARP6Q9BRS8 491 aaKnown RBP11.45□□□□□ -0.58
CDH1-206ENST00000564676 UPF3AQ9H1J1 476 aaKnown RBP11.45□□□□□ -0.58
CDH1-206ENST00000564676 PSTPIP2Q9H939 334 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 PHF24Q9UPV7 400 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 Q9Y3F1 56 aa11.45□□□□□ -0.58
CDH1-206ENST00000564676 MOXD2PA6NHM9 499 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 ZEB2O60315 1214 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 EIF3JO75822 258 aaKnown RBP11.44□□□□□ -0.58
CDH1-206ENST00000564676 TXNP10599 105 aaKnown RBP11.44□□□□□ -0.58
CDH1-206ENST00000564676 PTGS1P23219 599 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 CST5P28325 142 aaPredicted RBP11.44□□□□□ -0.58
CDH1-206ENST00000564676 PDIA3P30101 505 aaKnown RBP11.44□□□□□ -0.58
CDH1-206ENST00000564676 ACLYP53396 1101 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 NAPAP54920 295 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 BEX3Q00994 111 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 FUT2Q10981 343 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 TOB2Q14106 344 aaPredicted RBP11.44□□□□□ -0.58
CDH1-206ENST00000564676 FSCN1Q16658 493 aaKnown RBP11.44□□□□□ -0.58
CDH1-206ENST00000564676 TMEM63BQ5T3F8 832 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 USP17L6PQ6QN14 398 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 OR6J1Q8NGC5 347 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 GLT1D1Q96MS3 346 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 PDCD2LQ9BRP1 358 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 STARD7Q9NQZ5 370 aa11.44□□□□□ -0.58
CDH1-206ENST00000564676 A0A1W2PQ45 241 aaPredicted RBP11.43□□□□□ -0.58
CDH1-206ENST00000564676 A0A1W2PQY0 241 aa11.43□□□□□ -0.58
CDH1-206ENST00000564676 PIK3CDO00329 1044 aa11.43□□□□□ -0.58
CDH1-206ENST00000564676 NKRFO15226 690 aaKnown RBP eCLIP11.43□□□□□ -0.58
CDH1-206ENST00000564676 ASGR1P07306 291 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms