RNA–Protein interactions for RNA: ENST00000564674.5

DENND4A-206, Transcript of DENN domain containing 4A, humanhuman

TSL 1 (best)

Gene DENND4A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-206ENST00000564674 NUP58Q9BVL2 599 aa20.4■□□□□ 0.86
DENND4A-206ENST00000564674 DDX42Q86XP3 938 aaKnown RBP eCLIP20.4■□□□□ 0.86
DENND4A-206ENST00000564674 NELFCDQ8IXH7 590 aa20.4■□□□□ 0.86
DENND4A-206ENST00000564674 KIAA0895Q8NCT3 520 aa20.4■□□□□ 0.86
DENND4A-206ENST00000564674 CADPS2Q86UW7 1296 aa20.39■□□□□ 0.86
DENND4A-206ENST00000564674 PYM1Q9BRP8 204 aaKnown RBP20.39■□□□□ 0.86
DENND4A-206ENST00000564674 ATP6V1AP38606 617 aa20.39■□□□□ 0.85
DENND4A-206ENST00000564674 TRAPPC10P48553 1259 aa20.39■□□□□ 0.85
DENND4A-206ENST00000564674 EPHB4P54760 987 aa20.39■□□□□ 0.85
DENND4A-206ENST00000564674 CEP85LQ5SZL2 805 aa20.39■□□□□ 0.85
DENND4A-206ENST00000564674 CDK5RAP3Q96JB5 506 aa20.39■□□□□ 0.85
DENND4A-206ENST00000564674 UBA5Q9GZZ9 404 aa20.39■□□□□ 0.85
DENND4A-206ENST00000564674 KBTBD4Q9NVX7 518 aa20.39■□□□□ 0.85
DENND4A-206ENST00000564674 TMEM260Q9NX78 707 aa20.39■□□□□ 0.85
DENND4A-206ENST00000564674 MYH13Q9UKX3 1938 aa20.39■□□□□ 0.85
DENND4A-206ENST00000564674 ANO9A1A5B4 782 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 ARL6IP4Q66PJ3 421 aaKnown RBP20.38■□□□□ 0.85
DENND4A-206ENST00000564674 RCSD1Q6JBY9 416 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 TLR10Q9BXR5 811 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 BICDL2A1A5D9 508 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 GOLGA8KD6RF30 607 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 E7EVH7 732 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 PALMO75781 387 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 DHTKD1Q96HY7 919 aaPredicted RBP20.38■□□□□ 0.85
DENND4A-206ENST00000564674 CRNKL1Q9BZJ0 848 aaKnown RBP20.38■□□□□ 0.85
DENND4A-206ENST00000564674 GLI3P10071 1580 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 CYTH3O43739 400 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 SLC35G1Q2M3R5 365 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 KCNV1Q6PIU1 500 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 FAM84BQ96KN1 310 aaPredicted RBP20.38■□□□□ 0.85
DENND4A-206ENST00000564674 NID2Q14112 1375 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 CAMTA1Q9Y6Y1 1673 aa20.38■□□□□ 0.85
DENND4A-206ENST00000564674 LAMB4A4D0S4 1761 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 RCAN1P53805 252 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 VWA3BQ502W6 1294 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 ODF2Q5BJF6 829 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 MCTP2Q6DN12 878 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 FNBP4Q8N3X1 1017 aaPredicted RBP20.37■□□□□ 0.85
DENND4A-206ENST00000564674 MMGT1Q8N4V1 131 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 PACSIN1Q9BY11 444 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 CD248Q9HCU0 757 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 ANAPC4Q9UJX5 808 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 TSPY3P0CV98 308 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 TSPY8P0CW00 308 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 USP17L2Q6R6M4 530 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 CELF1Q92879 486 aaKnown RBP20.37■□□□□ 0.85
DENND4A-206ENST00000564674 IL17RBQ9NRM6 502 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 POTEMA6NI47 508 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 ZNF233A6NK53 670 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 SHOX2O60902 331 aaPredicted RBP20.37■□□□□ 0.85
DENND4A-206ENST00000564674 POLR2FP61218 127 aaKnown RBP20.37■□□□□ 0.85
DENND4A-206ENST00000564674 RAPGEF1Q13905 1077 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 FAM114A1Q8IWE2 563 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 TSGA10Q9BZW7 698 aa20.37■□□□□ 0.85
DENND4A-206ENST00000564674 CCDC40Q4G0X9 1142 aa20.36■□□□□ 0.85
DENND4A-206ENST00000564674 BRINP3Q76B58 766 aa20.36■□□□□ 0.85
DENND4A-206ENST00000564674 POTEDQ86YR6 584 aa20.36■□□□□ 0.85
DENND4A-206ENST00000564674 AP1M1Q9BXS5 423 aa20.36■□□□□ 0.85
DENND4A-206ENST00000564674 ADAMTS1Q9UHI8 967 aa20.36■□□□□ 0.85
DENND4A-206ENST00000564674 BAZ2AQ9UIF9 1905 aaKnown RBP20.36■□□□□ 0.85
DENND4A-206ENST00000564674 TCP1P17987 556 aaKnown RBP20.36■□□□□ 0.85
DENND4A-206ENST00000564674 HDLBPQ00341 1268 aaKnown RBP20.36■□□□□ 0.85
DENND4A-206ENST00000564674 DIXDC1Q155Q3 683 aa20.36■□□□□ 0.85
DENND4A-206ENST00000564674 ERFEQ4G0M1 354 aa20.36■□□□□ 0.85
DENND4A-206ENST00000564674 PAXIP1Q6ZW49 1069 aaPredicted RBP20.36■□□□□ 0.85
DENND4A-206ENST00000564674 NOC3LQ8WTT2 800 aaKnown RBP20.36■□□□□ 0.85
DENND4A-206ENST00000564674 TBC1D5Q92609 795 aa20.36■□□□□ 0.85
DENND4A-206ENST00000564674 NOX5Q96PH1 765 aa20.36■□□□□ 0.85
DENND4A-206ENST00000564674 PLAGL2Q9UPG8 496 aa20.36■□□□□ 0.85
DENND4A-206ENST00000564674 MYH6P13533 1939 aa20.36■□□□□ 0.85
DENND4A-206ENST00000564674 MARCH6O60337 910 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 OR52Z1P0C646 297 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 ACTN3Q08043 901 aaPredicted RBP20.35■□□□□ 0.85
DENND4A-206ENST00000564674 KCNB1Q14721 858 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 KLHDC7AQ5VTJ3 777 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 TRIM31Q9BZY9 425 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 SMCO2A6NFE2 343 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 TRAF5O00463 557 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 RAD21O60216 631 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 NUP188Q5SRE5 1749 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 MYMKA6NI61 221 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 LSP1P33241 339 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 EIF6P56537 245 aaKnown RBP20.35■□□□□ 0.85
DENND4A-206ENST00000564674 CFAP221Q4G0U5 840 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 DZIP1Q86YF9 867 aaKnown RBP20.35■□□□□ 0.85
DENND4A-206ENST00000564674 NSUN4Q96CB9 384 aaKnown RBP20.35■□□□□ 0.85
DENND4A-206ENST00000564674 BRIP1Q9BX63 1249 aa20.35■□□□□ 0.85
DENND4A-206ENST00000564674 TMOD1P28289 359 aa20.34■□□□□ 0.85
DENND4A-206ENST00000564674 IFT20Q8IY31 132 aa20.34■□□□□ 0.85
DENND4A-206ENST00000564674 TBCKQ8TEA7 893 aa20.34■□□□□ 0.85
DENND4A-206ENST00000564674 NUDT12Q9BQG2 462 aa20.34■□□□□ 0.85
DENND4A-206ENST00000564674 KLRF2D3W0D1 207 aa20.34■□□□□ 0.85
DENND4A-206ENST00000564674 NR1D1P20393 614 aa20.34■□□□□ 0.85
DENND4A-206ENST00000564674 KLRC1P26715 233 aa20.34■□□□□ 0.85
DENND4A-206ENST00000564674 CRKLP46109 303 aaKnown RBP20.34■□□□□ 0.85
DENND4A-206ENST00000564674 CASKIN2Q8WXE0 1202 aa20.34■□□□□ 0.85
DENND4A-206ENST00000564674 CALML4Q96GE6 196 aa20.34■□□□□ 0.85
DENND4A-206ENST00000564674 GPR101Q96P66 508 aaPredicted RBP20.34■□□□□ 0.85
DENND4A-206ENST00000564674 KIAA0753Q2KHM9 967 aa20.34■□□□□ 0.85
DENND4A-206ENST00000564674 SV2BQ7L1I2 683 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms