RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 PSRC1Q6PGN9 363 aaPredicted RBP29.28■■■□□ 2.28
SPG7-208ENST00000563783 OR6J1Q8NGC5 347 aa29.28■■■□□ 2.28
SPG7-208ENST00000563783 MTG1Q9BT17 334 aaPredicted RBP29.28■■■□□ 2.28
SPG7-208ENST00000563783 RIOX1Q9H6W3 641 aa29.28■■■□□ 2.28
SPG7-208ENST00000563783 CUL9Q8IWT3 2517 aa29.27■■■□□ 2.28
SPG7-208ENST00000563783 SUPT20HL2P0C7V6 817 aa29.27■■■□□ 2.28
SPG7-208ENST00000563783 STXBP2Q15833 593 aa29.27■■■□□ 2.28
SPG7-208ENST00000563783 CCDC62Q6P9F0 684 aa29.27■■■□□ 2.28
SPG7-208ENST00000563783 RMDN3Q96TC7 470 aa29.27■■■□□ 2.28
SPG7-208ENST00000563783 MAP3K14Q99558 947 aa29.27■■■□□ 2.28
SPG7-208ENST00000563783 TXNP10599 105 aaKnown RBP29.26■■■□□ 2.27
SPG7-208ENST00000563783 PTGS1P23219 599 aa29.26■■■□□ 2.27
SPG7-208ENST00000563783 TROAPQ12815 778 aa29.26■■■□□ 2.27
SPG7-208ENST00000563783 WTAPQ15007 396 aa29.26■■■□□ 2.27
SPG7-208ENST00000563783 RASIP1Q5U651 963 aa29.26■■■□□ 2.27
SPG7-208ENST00000563783 ALDH8A1Q9H2A2 487 aaPredicted RBP29.26■■■□□ 2.27
SPG7-208ENST00000563783 HIPK3Q9H422 1215 aa29.26■■■□□ 2.27
SPG7-208ENST00000563783 VAT1LQ9HCJ6 419 aa29.26■■■□□ 2.27
SPG7-208ENST00000563783 GPHNQ9NQX3 736 aaPredicted RBP29.26■■■□□ 2.27
SPG7-208ENST00000563783 COL20A1Q9P218 1284 aa29.26■■■□□ 2.27
SPG7-208ENST00000563783 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.25■■■□□ 2.27
SPG7-208ENST00000563783 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.25■■■□□ 2.27
SPG7-208ENST00000563783 MB21D2Q8IYB1 491 aaPredicted RBP29.25■■■□□ 2.27
SPG7-208ENST00000563783 TBC1D5Q92609 795 aa29.25■■■□□ 2.27
SPG7-208ENST00000563783 TAAR1Q96RJ0 339 aa29.25■■■□□ 2.27
SPG7-208ENST00000563783 RBM8AQ9Y5S9 174 aaKnown RBP29.25■■■□□ 2.27
SPG7-208ENST00000563783 OPLAHO14841 1288 aa29.24■■■□□ 2.27
SPG7-208ENST00000563783 B4GALT4O60513 344 aa29.24■■■□□ 2.27
SPG7-208ENST00000563783 PTPN11Q06124 597 aaPredicted RBP29.24■■■□□ 2.27
SPG7-208ENST00000563783 TMEM240Q5SV17 173 aa29.24■■■□□ 2.27
SPG7-208ENST00000563783 NFRKBQ6P4R8 1299 aa29.24■■■□□ 2.27
SPG7-208ENST00000563783 STOX1Q6ZVD7 989 aa29.24■■■□□ 2.27
SPG7-208ENST00000563783 GUCD1Q96NT3 240 aa29.24■■■□□ 2.27
SPG7-208ENST00000563783 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.24■■■□□ 2.274e-7■■■■□ 23.3
SPG7-208ENST00000563783 NOC4LQ9BVI4 516 aaKnown RBP29.24■■■□□ 2.27
SPG7-208ENST00000563783 IL23AQ9NPF7 189 aa29.24■■■□□ 2.27
SPG7-208ENST00000563783 PCDHA1Q9Y5I3 950 aa29.24■■■□□ 2.27
SPG7-208ENST00000563783 EIF3JO75822 258 aaKnown RBP29.23■■■□□ 2.27
SPG7-208ENST00000563783 CSF2RAP15509 400 aa29.23■■■□□ 2.27
SPG7-208ENST00000563783 C16orf59Q7L2K0 433 aa29.23■■■□□ 2.27
SPG7-208ENST00000563783 IGDCC4Q8TDY8 1250 aa29.23■■■□□ 2.27
SPG7-208ENST00000563783 PPP1R12CQ9BZL4 782 aa29.23■■■□□ 2.27
SPG7-208ENST00000563783 PXMP2Q9NR77 195 aa29.23■■■□□ 2.27
SPG7-208ENST00000563783 MYH7BA7E2Y1 1941 aa29.22■■■□□ 2.27
SPG7-208ENST00000563783 PSMC6P62333 389 aa29.22■■■□□ 2.27
SPG7-208ENST00000563783 TMEM67Q5HYA8 995 aa29.22■■■□□ 2.27
SPG7-208ENST00000563783 ARHGEF16Q5VV41 709 aa29.22■■■□□ 2.27
SPG7-208ENST00000563783 CATIPQ7Z7H3 387 aa29.22■■■□□ 2.27
SPG7-208ENST00000563783 EMID1Q96A84 441 aaPredicted RBP29.22■■■□□ 2.27
SPG7-208ENST00000563783 SEMA6BQ9H3T3 888 aa29.22■■■□□ 2.27
SPG7-208ENST00000563783 TAF6LQ9Y6J9 622 aa29.22■■■□□ 2.27
SPG7-208ENST00000563783 PPP1R11O60927 126 aaPredicted RBP29.21■■■□□ 2.27
SPG7-208ENST00000563783 ARIH2O95376 493 aa29.21■■■□□ 2.27
SPG7-208ENST00000563783 CFBP00751 764 aa29.21■■■□□ 2.27
SPG7-208ENST00000563783 GH1P01241 217 aa29.21■■■□□ 2.27
SPG7-208ENST00000563783 NR3C2P08235 984 aa29.21■■■□□ 2.27
SPG7-208ENST00000563783 MYL3P08590 195 aa29.21■■■□□ 2.27
SPG7-208ENST00000563783 SMARCA1P28370 1054 aa29.21■■■□□ 2.27
SPG7-208ENST00000563783 ANTXR2P58335 489 aa29.21■■■□□ 2.27
SPG7-208ENST00000563783 TMTC2Q8N394 836 aa29.21■■■□□ 2.27
SPG7-208ENST00000563783 TRPV6Q9H1D0 765 aa29.21■■■□□ 2.27
SPG7-208ENST00000563783 MTIF3Q9H2K0 278 aaKnown RBP29.21■■■□□ 2.27
SPG7-208ENST00000563783 PNMA6FA0A0J9YX94 578 aa29.2■■■□□ 2.26
SPG7-208ENST00000563783 DDAH1O94760 285 aa29.2■■■□□ 2.26
SPG7-208ENST00000563783 CYP2C18P33260 490 aa29.2■■■□□ 2.26
SPG7-208ENST00000563783 BMP2KLQ5H9B9 411 aa29.2■■■□□ 2.26
SPG7-208ENST00000563783 KCNV1Q6PIU1 500 aa29.2■■■□□ 2.26
SPG7-208ENST00000563783 CENPQQ7L2Z9 268 aaPredicted RBP29.2■■■□□ 2.26
SPG7-208ENST00000563783 SLC17A8Q8NDX2 589 aa29.2■■■□□ 2.26
SPG7-208ENST00000563783 ESYT1Q9BSJ8 1104 aa29.2■■■□□ 2.26
SPG7-208ENST00000563783 LSG1Q9H089 658 aaKnown RBP29.2■■■□□ 2.26
SPG7-208ENST00000563783 ARHGAP1Q07960 439 aa29.19■■■□□ 2.26
SPG7-208ENST00000563783 SLC35G1Q2M3R5 365 aa29.19■■■□□ 2.26
SPG7-208ENST00000563783 HERVK_113Q902F9 699 aa29.19■■■□□ 2.26
SPG7-208ENST00000563783 MYO9BQ13459 2157 aa29.19■■■□□ 2.26
SPG7-208ENST00000563783 A0A0C4DFX4 3053 aa29.19■■■□□ 2.26
SPG7-208ENST00000563783 TANC1Q9C0D5 1861 aa29.19■■■□□ 2.26
SPG7-208ENST00000563783 CYTH3O43739 400 aa29.18■■■□□ 2.26
SPG7-208ENST00000563783 PFKMP08237 780 aa29.18■■■□□ 2.26
SPG7-208ENST00000563783 KIF5BP33176 963 aa29.18■■■□□ 2.26
SPG7-208ENST00000563783 SEPT14Q6ZU15 432 aa29.18■■■□□ 2.26
SPG7-208ENST00000563783 RPUSD2Q8IZ73 545 aaKnown RBP29.18■■■□□ 2.26
SPG7-208ENST00000563783 COPS5Q92905 334 aa29.18■■■□□ 2.26
SPG7-208ENST00000563783 TMEM87BQ96K49 555 aa29.18■■■□□ 2.26
SPG7-208ENST00000563783 PIGSQ96S52 555 aa29.18■■■□□ 2.26
SPG7-208ENST00000563783 LZTS2Q9BRK4 669 aa29.18■■■□□ 2.26
SPG7-208ENST00000563783 PDCD2LQ9BRP1 358 aa29.18■■■□□ 2.26
SPG7-208ENST00000563783 SPZ1Q9BXG8 430 aa29.18■■■□□ 2.26
SPG7-208ENST00000563783 SENP2Q9HC62 589 aa29.18■■■□□ 2.26
SPG7-208ENST00000563783 EIF2AK2P19525 551 aaKnown RBP29.17■■■□□ 2.26
SPG7-208ENST00000563783 MCM5P33992 734 aa29.17■■■□□ 2.26
SPG7-208ENST00000563783 NBPF20Q3BBV1 942 aa29.17■■■□□ 2.26
SPG7-208ENST00000563783 CASC1Q6TDU7 716 aa29.17■■■□□ 2.26
SPG7-208ENST00000563783 ZNF365Q70YC5 407 aa29.17■■■□□ 2.26
SPG7-208ENST00000563783 SESTD1Q86VW0 696 aa29.17■■■□□ 2.26
SPG7-208ENST00000563783 WNT8AQ9H1J5 351 aa29.17■■■□□ 2.26
SPG7-208ENST00000563783 TTYH1Q9H313 450 aaPredicted RBP29.17■■■□□ 2.26
SPG7-208ENST00000563783 LY9Q9HBG7 655 aa29.17■■■□□ 2.26
SPG7-208ENST00000563783 DDX41Q9UJV9 622 aaKnown RBP29.17■■■□□ 2.26
SPG7-208ENST00000563783 PITPNM1O00562 1244 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms