RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 C6orf222P0C671 652 aaPredicted RBP19.69■□□□□ 0.74
SPSB3-202ENST00000563668 EDNRBP24530 442 aa19.69■□□□□ 0.74
SPSB3-202ENST00000563668 PSMA5P28066 241 aa19.69■□□□□ 0.74
SPSB3-202ENST00000563668 GJA9P57773 515 aa19.69■□□□□ 0.74
SPSB3-202ENST00000563668 BEX3Q00994 111 aa19.69■□□□□ 0.74
SPSB3-202ENST00000563668 HABP4Q5JVS0 413 aaKnown RBP19.69■□□□□ 0.74
SPSB3-202ENST00000563668 SRBD1Q8N5C6 995 aaKnown RBP19.69■□□□□ 0.74
SPSB3-202ENST00000563668 UPF3AQ9H1J1 476 aaKnown RBP19.69■□□□□ 0.74
SPSB3-202ENST00000563668 PDRG1Q9NUG6 133 aa19.69■□□□□ 0.74
SPSB3-202ENST00000563668 BRPF3Q9ULD4 1205 aa19.69■□□□□ 0.74
SPSB3-202ENST00000563668 ZDHHC9Q9Y397 364 aa19.69■□□□□ 0.74
SPSB3-202ENST00000563668 PCDHA1Q9Y5I3 950 aa19.69■□□□□ 0.74
SPSB3-202ENST00000563668 LAMA3Q16787 3333 aa19.68■□□□□ 0.74
SPSB3-202ENST00000563668 TRAK2O60296 914 aa19.68■□□□□ 0.74
SPSB3-202ENST00000563668 BAG4O95429 457 aaKnown RBP19.68■□□□□ 0.74
SPSB3-202ENST00000563668 ACLYP53396 1101 aa19.68■□□□□ 0.74
SPSB3-202ENST00000563668 PKP1Q13835 747 aa19.68■□□□□ 0.74
SPSB3-202ENST00000563668 TRIM60Q495X7 471 aa19.68■□□□□ 0.74
SPSB3-202ENST00000563668 MAP3K14Q99558 947 aa19.68■□□□□ 0.74
SPSB3-202ENST00000563668 ATP11BQ9Y2G3 1177 aa19.68■□□□□ 0.74
SPSB3-202ENST00000563668 CFBP00751 764 aa19.67■□□□□ 0.74
SPSB3-202ENST00000563668 SNX17Q15036 470 aa19.67■□□□□ 0.74
SPSB3-202ENST00000563668 DHX32Q7L7V1 743 aaKnown RBP19.67■□□□□ 0.74
SPSB3-202ENST00000563668 TMTC2Q8N394 836 aa19.67■□□□□ 0.74
SPSB3-202ENST00000563668 DNERQ8NFT8 737 aa19.67■□□□□ 0.74
SPSB3-202ENST00000563668 ALDH8A1Q9H2A2 487 aaPredicted RBP19.67■□□□□ 0.74
SPSB3-202ENST00000563668 VTA1Q9NP79 307 aa19.67■□□□□ 0.74
SPSB3-202ENST00000563668 PNMA6FA0A0J9YX94 578 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 DYNC1LI2O43237 492 aaPredicted RBP19.66■□□□□ 0.74
SPSB3-202ENST00000563668 ASGR1P07306 291 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 HOXA13P31271 388 aaPredicted RBP19.66■□□□□ 0.74
SPSB3-202ENST00000563668 HSD17B4P51659 736 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 GNASQ5JWF2 1037 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 IQSEC1Q6DN90 963 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 SGMS1Q86VZ5 419 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 MCF2L2Q86YR7 1114 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 CTCFLQ8NI51 663 aaPredicted RBP19.66■□□□□ 0.74
SPSB3-202ENST00000563668 ZSCAN31Q96LW9 406 aaPredicted RBP19.66■□□□□ 0.74
SPSB3-202ENST00000563668 TSEN34Q9BSV6 310 aaKnown RBP19.66■□□□□ 0.74
SPSB3-202ENST00000563668 SLC12A7Q9Y666 1083 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 hCG_1642624A0A1W2PR95 340 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 RBM47A0AV96 593 aaKnown RBP19.66■□□□□ 0.74
SPSB3-202ENST00000563668 CST5P28325 142 aaPredicted RBP19.66■□□□□ 0.74
SPSB3-202ENST00000563668 NKX3-2P78367 333 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 PDE4DQ08499 809 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 KRT32Q14532 448 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 TLK2Q86UE8 772 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 CCDC82Q8N4S0 544 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 GDF15Q99988 308 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 WDR11Q9BZH6 1224 aa19.66■□□□□ 0.74
SPSB3-202ENST00000563668 SZT2Q5T011 3432 aa19.65■□□□□ 0.74
SPSB3-202ENST00000563668 LOC102724159A0A0B4J2E5 919 aa19.65■□□□□ 0.74
SPSB3-202ENST00000563668 BRD1O95696 1058 aa19.65■□□□□ 0.74
SPSB3-202ENST00000563668 MAGEA10P43363 369 aaPredicted RBP19.65■□□□□ 0.74
SPSB3-202ENST00000563668 GHRHRQ02643 423 aa19.65■□□□□ 0.74
SPSB3-202ENST00000563668 PWP2Q15269 919 aaKnown RBP19.65■□□□□ 0.74
SPSB3-202ENST00000563668 SH3RF1Q7Z6J0 888 aa19.65■□□□□ 0.74
SPSB3-202ENST00000563668 MICU3Q86XE3 530 aa19.65■□□□□ 0.74
SPSB3-202ENST00000563668 FANCBQ8NB91 859 aa19.65■□□□□ 0.74
SPSB3-202ENST00000563668 COPS5Q92905 334 aa19.65■□□□□ 0.74
SPSB3-202ENST00000563668 RMDN3Q96TC7 470 aa19.65■□□□□ 0.74
SPSB3-202ENST00000563668 SPZ1Q9BXG8 430 aa19.65■□□□□ 0.74
SPSB3-202ENST00000563668 ARIH2O95376 493 aa19.64■□□□□ 0.73
SPSB3-202ENST00000563668 EIF2AK2P19525 551 aaKnown RBP19.64■□□□□ 0.73
SPSB3-202ENST00000563668 RPS6KB1P23443 525 aa19.64■□□□□ 0.73
SPSB3-202ENST00000563668 KIF5BP33176 963 aa19.64■□□□□ 0.73
SPSB3-202ENST00000563668 TLE2Q04725 743 aa19.64■□□□□ 0.73
SPSB3-202ENST00000563668 DUSP28Q4G0W2 176 aa19.64■□□□□ 0.73
SPSB3-202ENST00000563668 APOA5Q6Q788 366 aa19.64■□□□□ 0.73
SPSB3-202ENST00000563668 BLOC1S2Q6QNY1 142 aa19.64■□□□□ 0.73
SPSB3-202ENST00000563668 PXMP2Q9NR77 195 aa19.64■□□□□ 0.73
SPSB3-202ENST00000563668 SH2B1Q9NRF2 756 aaPredicted RBP19.64■□□□□ 0.73
SPSB3-202ENST00000563668 MOXD2PA6NHM9 499 aa19.63■□□□□ 0.73
SPSB3-202ENST00000563668 GOLGA6L22H0YM25 854 aa19.63■□□□□ 0.73
SPSB3-202ENST00000563668 MDM2Q00987 491 aaPredicted RBP19.63■□□□□ 0.73
SPSB3-202ENST00000563668 FSCN1Q16658 493 aaKnown RBP19.63■□□□□ 0.73
SPSB3-202ENST00000563668 SKOR2Q2VWA4 1001 aaPredicted RBP19.63■□□□□ 0.73
SPSB3-202ENST00000563668 C1orf53Q5VUE5 145 aa19.63■□□□□ 0.73
SPSB3-202ENST00000563668 CXCL17Q6UXB2 119 aa19.63■□□□□ 0.73
SPSB3-202ENST00000563668 NSUN6Q8TEA1 469 aaKnown RBP19.63■□□□□ 0.73
SPSB3-202ENST00000563668 ZFP91Q96JP5 570 aaPredicted RBP19.63■□□□□ 0.73
SPSB3-202ENST00000563668 MAF1Q9H063 256 aa19.63■□□□□ 0.73
SPSB3-202ENST00000563668 SPC25Q9HBM1 224 aa19.63■□□□□ 0.73
SPSB3-202ENST00000563668 STARD7Q9NQZ5 370 aa19.63■□□□□ 0.73
SPSB3-202ENST00000563668 LARGE1O95461 756 aa19.62■□□□□ 0.73
SPSB3-202ENST00000563668 SMARCA1P28370 1054 aa19.62■□□□□ 0.73
SPSB3-202ENST00000563668 TMTC3Q6ZXV5 915 aa19.62■□□□□ 0.73
SPSB3-202ENST00000563668 IL31RAQ8NI17 732 aa19.62■□□□□ 0.73
SPSB3-202ENST00000563668 RRP36Q96EU6 259 aaKnown RBP19.62■□□□□ 0.73
SPSB3-202ENST00000563668 AP5M1Q9H0R1 490 aa19.62■□□□□ 0.73
SPSB3-202ENST00000563668 FAM217BQ9NTX9 383 aaPredicted RBP19.62■□□□□ 0.73
SPSB3-202ENST00000563668 LAMA2P24043 3122 aaKnown RBP19.62■□□□□ 0.73
SPSB3-202ENST00000563668 TRIM43BA6NCK2 446 aa19.61■□□□□ 0.73
SPSB3-202ENST00000563668 CALM1P0DP23 149 aa19.61■□□□□ 0.73
SPSB3-202ENST00000563668 CALM2P0DP24 149 aa19.61■□□□□ 0.73
SPSB3-202ENST00000563668 CALM3P0DP25 149 aa19.61■□□□□ 0.73
SPSB3-202ENST00000563668 ITGB8P26012 769 aa19.61■□□□□ 0.73
SPSB3-202ENST00000563668 ANKRD1Q15327 319 aa19.61■□□□□ 0.73
SPSB3-202ENST00000563668 ARHGEF16Q5VV41 709 aa19.61■□□□□ 0.73
SPSB3-202ENST00000563668 SEPT14Q6ZU15 432 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms