RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 ACBD5Q5T8D3 534 aaPredicted RBP5.9□□□□□ -1.46
GDE1-202ENST00000563645 IQCEQ6IPM2 695 aa5.9□□□□□ -1.46
GDE1-202ENST00000563645 TMEFF1Q8IYR6 380 aa5.9□□□□□ -1.46
GDE1-202ENST00000563645 USP33Q8TEY7 942 aa5.9□□□□□ -1.46
GDE1-202ENST00000563645 PEX11GQ96HA9 241 aa5.9□□□□□ -1.46
GDE1-202ENST00000563645 CCDC140Q96MF4 163 aa5.9□□□□□ -1.46
GDE1-202ENST00000563645 C8orf37Q96NL8 207 aa5.9□□□□□ -1.46
GDE1-202ENST00000563645 EPB41L4AQ9HCS5 686 aaPredicted RBP5.9□□□□□ -1.46
GDE1-202ENST00000563645 MARCH2Q9P0N8 246 aa5.9□□□□□ -1.46
GDE1-202ENST00000563645 FUCA1P04066 466 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 CAPNS1P04632 268 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 IGFBP6P24592 240 aaPredicted RBP5.89□□□□□ -1.47
GDE1-202ENST00000563645 KCNJ6P48051 423 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 PPP2R2AP63151 447 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 SF1Q15637 639 aaKnown RBP5.89□□□□□ -1.47
GDE1-202ENST00000563645 PRSS53Q2L4Q9 553 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 TCERG1LQ5VWI1 586 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 FAM129CQ86XR2 697 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 CCDC103Q8IW40 242 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 PPIL6Q8IXY8 311 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 TMEM145Q8NBT3 493 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 KREMEN2Q8NCW0 462 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 PLEKHO2Q8TD55 490 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 PANK1Q8TE04 598 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 ALG3Q92685 438 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 DPF3Q92784 378 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 DIO2Q92813 273 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 DACT3Q96B18 629 aaPredicted RBP5.89□□□□□ -1.47
GDE1-202ENST00000563645 TRIM55Q9BYV6 548 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 RNF38Q9H0F5 515 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 RXFP1Q9HBX9 757 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 PLA2G2DQ9UNK4 145 aa5.89□□□□□ -1.47
GDE1-202ENST00000563645 A0A1W2PQU0 124 aa5.88□□□□□ -1.47
GDE1-202ENST00000563645 AFF3P51826 1226 aaKnown RBP5.88□□□□□ -1.47
GDE1-202ENST00000563645 RPL11P62913 178 aaKnown RBP5.88□□□□□ -1.47
GDE1-202ENST00000563645 SLC9A5Q14940 896 aa5.88□□□□□ -1.47
GDE1-202ENST00000563645 CNKSR3Q6P9H4 555 aa5.88□□□□□ -1.47
GDE1-202ENST00000563645 DCP2Q8IU60 420 aaKnown RBP5.88□□□□□ -1.47
GDE1-202ENST00000563645 CKAP2LQ8IYA6 745 aa5.88□□□□□ -1.47
GDE1-202ENST00000563645 Q8N1Y9 231 aa5.88□□□□□ -1.47
GDE1-202ENST00000563645 C1orf159Q96HA4 380 aa5.88□□□□□ -1.47
GDE1-202ENST00000563645 TANGO6Q9C0B7 1094 aa5.88□□□□□ -1.47
GDE1-202ENST00000563645 BTG4Q9NY30 223 aa5.88□□□□□ -1.47
GDE1-202ENST00000563645 TMEFF2Q9UIK5 374 aaPredicted RBP5.88□□□□□ -1.47
GDE1-202ENST00000563645 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
GDE1-202ENST00000563645 MYO1BO43795 1136 aa5.87□□□□□ -1.47
GDE1-202ENST00000563645 NTRK1P04629 796 aa5.87□□□□□ -1.47
GDE1-202ENST00000563645 ASGR2P07307 311 aa5.87□□□□□ -1.47
GDE1-202ENST00000563645 LTBRP36941 435 aa5.87□□□□□ -1.47
GDE1-202ENST00000563645 MAP4K2Q12851 820 aa5.87□□□□□ -1.47
GDE1-202ENST00000563645 SLC35F1Q5T1Q4 408 aa5.87□□□□□ -1.47
GDE1-202ENST00000563645 NLRP10Q86W26 655 aa5.87□□□□□ -1.47
GDE1-202ENST00000563645 TEX2Q8IWB9 1127 aa5.87□□□□□ -1.47
GDE1-202ENST00000563645 ST13P5Q8NFI4 369 aaPredicted RBP5.87□□□□□ -1.47
GDE1-202ENST00000563645 SGSM3Q96HU1 749 aa5.87□□□□□ -1.47
GDE1-202ENST00000563645 TIMM13Q9Y5L4 95 aaPredicted RBP5.87□□□□□ -1.47
GDE1-202ENST00000563645 IQCA1LA6NCM1 817 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 C22orf46C9J442 243 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 ARNTLO00327 626 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 ZBTB7AO95365 584 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 NCAM1P13591 858 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 ATF2P15336 505 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 ATP2B1P20020 1258 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 FPR2P25090 351 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 PMLP29590 882 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 GRIA2P42262 883 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 LIMS1P48059 325 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 GTF2A2P52657 109 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 DENND5AQ6IQ26 1287 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 RIOX2Q8IUF8 465 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 KCTD13Q8WZ19 329 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 BCAS3Q9H6U6 928 aa5.86□□□□□ -1.47
GDE1-202ENST00000563645 U2SURPO15042 1029 aaKnown RBP5.85□□□□□ -1.47
GDE1-202ENST00000563645 BCL6P41182 706 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 MC3RP41968 323 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 SLC6A11P48066 632 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 HSP90AA2PQ14568 343 aaPredicted RBP5.85□□□□□ -1.47
GDE1-202ENST00000563645 MROH9Q5TGP6 573 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 NBPF6Q5VWK0 638 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 RCBTB1Q8NDN9 531 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 NBPF4Q96M43 638 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 PWWP2AQ96N64 755 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 AARSD1Q9BTE6 412 aaKnown RBP5.85□□□□□ -1.47
GDE1-202ENST00000563645 IER2Q9BTL4 223 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 AP5M1Q9H0R1 490 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 FBXL7Q9UJT9 491 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 FAN1Q9Y2M0 1017 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 MSRB2Q9Y3D2 182 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 SIT1Q9Y3P8 196 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 X6R8D5 127 aa5.85□□□□□ -1.47
GDE1-202ENST00000563645 LCP1P13796 627 aa5.84□□□□□ -1.47
GDE1-202ENST00000563645 FOXO4P98177 505 aa5.84□□□□□ -1.47
GDE1-202ENST00000563645 CAP1Q01518 475 aa5.84□□□□□ -1.47
GDE1-202ENST00000563645 B3GNT8Q7Z7M8 397 aa5.84□□□□□ -1.47
GDE1-202ENST00000563645 LRRC47Q8N1G4 583 aaKnown RBP5.84□□□□□ -1.47
GDE1-202ENST00000563645 NLGN1Q8N2Q7 840 aa5.84□□□□□ -1.47
GDE1-202ENST00000563645 CPA5Q8WXQ8 436 aa5.84□□□□□ -1.47
GDE1-202ENST00000563645 SEC14L1Q92503 715 aa5.84□□□□□ -1.47
GDE1-202ENST00000563645 ZNF669Q96BR6 464 aaPredicted RBP5.84□□□□□ -1.47
GDE1-202ENST00000563645 TRMT2BQ96GJ1 504 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms