RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 TRIP12Q14669 1992 aaPredicted RBP24.53■■□□□ 1.52
CHD9-208ENST00000563410 IMMTQ16891 758 aaKnown RBP24.52■■□□□ 1.52
CHD9-208ENST00000563410 MTG1Q9BT17 334 aaPredicted RBP24.52■■□□□ 1.52
CHD9-208ENST00000563410 TNKSO95271 1327 aa24.52■■□□□ 1.52
CHD9-208ENST00000563410 A6NJR5 290 aa24.51■■□□□ 1.51
CHD9-208ENST00000563410 ARIH2O95376 493 aa24.51■■□□□ 1.51
CHD9-208ENST00000563410 ASPRV1Q53RT3 343 aa24.51■■□□□ 1.51
CHD9-208ENST00000563410 OTOP2Q7RTS6 562 aa24.51■■□□□ 1.51
CHD9-208ENST00000563410 SCLYQ96I15 445 aa24.51■■□□□ 1.51
CHD9-208ENST00000563410 MAF1Q9H063 256 aa24.51■■□□□ 1.51
CHD9-208ENST00000563410 ABCB11O95342 1321 aa24.51■■□□□ 1.51
CHD9-208ENST00000563410 MYH7BA7E2Y1 1941 aa24.51■■□□□ 1.51
CHD9-208ENST00000563410 CHD7Q9P2D1 2997 aa24.51■■□□□ 1.51
CHD9-208ENST00000563410 TANC1Q9C0D5 1861 aa24.5■■□□□ 1.51
CHD9-208ENST00000563410 TXNP10599 105 aaKnown RBP24.5■■□□□ 1.51
CHD9-208ENST00000563410 CYP2C9P11712 490 aa24.5■■□□□ 1.51
CHD9-208ENST00000563410 QRICH1Q2TAL8 776 aa24.5■■□□□ 1.51
CHD9-208ENST00000563410 NBPF20Q3BBV1 942 aa24.5■■□□□ 1.51
CHD9-208ENST00000563410 SYTL5Q8TDW5 730 aaPredicted RBP24.5■■□□□ 1.51
CHD9-208ENST00000563410 TAAR1Q96RJ0 339 aa24.5■■□□□ 1.51
CHD9-208ENST00000563410 COL20A1Q9P218 1284 aa24.5■■□□□ 1.51
CHD9-208ENST00000563410 CTNNA3Q9UI47 895 aa24.5■■□□□ 1.51
CHD9-208ENST00000563410 TET1Q8NFU7 2136 aa24.5■■□□□ 1.51
CHD9-208ENST00000563410 TTC28Q96AY4 2481 aa24.5■■□□□ 1.51
CHD9-208ENST00000563410 BAZ2BQ9UIF8 2168 aaKnown RBP24.49■■□□□ 1.51
CHD9-208ENST00000563410 B4DLN1 442 aa24.49■■□□□ 1.51
CHD9-208ENST00000563410 SUPT20HL2P0C7V6 817 aa24.49■■□□□ 1.51
CHD9-208ENST00000563410 PDE4AP27815 886 aa24.49■■□□□ 1.51
CHD9-208ENST00000563410 MRPL12P52815 198 aaKnown RBP24.49■■□□□ 1.51
CHD9-208ENST00000563410 USP38Q8NB14 1042 aa24.49■■□□□ 1.51
CHD9-208ENST00000563410 PPP1R13LQ8WUF5 828 aa24.49■■□□□ 1.51
CHD9-208ENST00000563410 KRT23Q9C075 422 aa24.49■■□□□ 1.51
CHD9-208ENST00000563410 JMJD4Q9H9V9 463 aa24.49■■□□□ 1.51
CHD9-208ENST00000563410 GPHNQ9NQX3 736 aaPredicted RBP24.49■■□□□ 1.51
CHD9-208ENST00000563410 RAD50Q92878 1312 aa24.49■■□□□ 1.51
CHD9-208ENST00000563410 PARP1P09874 1014 aaKnown RBP24.48■■□□□ 1.51
CHD9-208ENST00000563410 TTLL4Q14679 1199 aa24.48■■□□□ 1.51
CHD9-208ENST00000563410 BRDTQ58F21 947 aaPredicted RBP24.48■■□□□ 1.51
CHD9-208ENST00000563410 CCDC62Q6P9F0 684 aa24.48■■□□□ 1.51
CHD9-208ENST00000563410 RPUSD2Q8IZ73 545 aaKnown RBP24.48■■□□□ 1.51
CHD9-208ENST00000563410 MTIF3Q9H2K0 278 aaKnown RBP24.48■■□□□ 1.51
CHD9-208ENST00000563410 CNNM2Q9H8M5 875 aa24.48■■□□□ 1.51
CHD9-208ENST00000563410 GSPT1P15170 499 aaKnown RBP24.47■■□□□ 1.51
CHD9-208ENST00000563410 RAB30Q15771 203 aa24.47■■□□□ 1.51
CHD9-208ENST00000563410 NFRKBQ6P4R8 1299 aa24.47■■□□□ 1.51
CHD9-208ENST00000563410 FBXO11Q86XK2 927 aa24.47■■□□□ 1.51
CHD9-208ENST00000563410 STAG2Q8N3U4 1231 aa24.47■■□□□ 1.51
CHD9-208ENST00000563410 PRDM12Q9H4Q4 367 aa24.47■■□□□ 1.51
CHD9-208ENST00000563410 VAT1LQ9HCJ6 419 aa24.47■■□□□ 1.51
CHD9-208ENST00000563410 MSRAQ9UJ68 235 aa24.47■■□□□ 1.51
CHD9-208ENST00000563410 YBX2Q9Y2T7 364 aaKnown RBP24.47■■□□□ 1.51
CHD9-208ENST00000563410 KPNA6O60684 536 aa24.46■■□□□ 1.51
CHD9-208ENST00000563410 SEC23AQ15436 765 aa24.46■■□□□ 1.51
CHD9-208ENST00000563410 FAM47CQ5HY64 1035 aa24.46■■□□□ 1.51
CHD9-208ENST00000563410 NSUN6Q8TEA1 469 aaKnown RBP24.46■■□□□ 1.51
CHD9-208ENST00000563410 UBAC1Q9BSL1 405 aa24.46■■□□□ 1.51
CHD9-208ENST00000563410 NKX2-4Q9H2Z4 354 aa24.46■■□□□ 1.51
CHD9-208ENST00000563410 LY6KQ17RY6 165 aa24.45■■□□□ 1.5
CHD9-208ENST00000563410 IFIT1BQ5T764 474 aaKnown RBP24.45■■□□□ 1.5
CHD9-208ENST00000563410 CYB5R4Q7L1T6 521 aa24.45■■□□□ 1.5
CHD9-208ENST00000563410 MCF2L2Q86YR7 1114 aa24.45■■□□□ 1.5
CHD9-208ENST00000563410 RMDN3Q96TC7 470 aa24.45■■□□□ 1.5
CHD9-208ENST00000563410 MRPL11Q9Y3B7 192 aaKnown RBP24.45■■□□□ 1.5
CHD9-208ENST00000563410 OPLAHO14841 1288 aa24.44■■□□□ 1.5
CHD9-208ENST00000563410 DHX16O60231 1041 aaKnown RBP24.44■■□□□ 1.5
CHD9-208ENST00000563410 PTPN11Q06124 597 aaPredicted RBP24.44■■□□□ 1.5
CHD9-208ENST00000563410 TTC22Q5TAA0 569 aa24.44■■□□□ 1.5
CHD9-208ENST00000563410 SEPT14Q6ZU15 432 aa24.44■■□□□ 1.5
CHD9-208ENST00000563410 IWS1Q96ST2 819 aa24.44■■□□□ 1.5
CHD9-208ENST00000563410 GAS2L1Q99501 681 aaPredicted RBP24.44■■□□□ 1.5
CHD9-208ENST00000563410 PFKMP08237 780 aa24.43■■□□□ 1.5
CHD9-208ENST00000563410 MMP3P08254 477 aa24.43■■□□□ 1.5
CHD9-208ENST00000563410 RABGGTBP53611 331 aa24.43■■□□□ 1.5
CHD9-208ENST00000563410 ARHGAP1Q07960 439 aa24.43■■□□□ 1.5
CHD9-208ENST00000563410 ADGRE1Q14246 886 aa24.43■■□□□ 1.5
CHD9-208ENST00000563410 STXBP2Q15833 593 aa24.43■■□□□ 1.5
CHD9-208ENST00000563410 DEFB128Q7Z7B8 93 aa24.43■■□□□ 1.5
CHD9-208ENST00000563410 AFG1LQ8WV93 481 aa24.43■■□□□ 1.5
CHD9-208ENST00000563410 MTMR8Q96EF0 704 aa24.43■■□□□ 1.5
CHD9-208ENST00000563410 MAD2L2Q9UI95 211 aa24.43■■□□□ 1.5
CHD9-208ENST00000563410 SLC4A7Q9Y6M7 1214 aa24.43■■□□□ 1.5
CHD9-208ENST00000563410 PTPRSQ13332 1948 aa24.42■■□□□ 1.5
CHD9-208ENST00000563410 PPP1R11O60927 126 aaPredicted RBP24.42■■□□□ 1.5
CHD9-208ENST00000563410 GH1P01241 217 aa24.42■■□□□ 1.5
CHD9-208ENST00000563410 GHRHRQ02643 423 aa24.42■■□□□ 1.5
CHD9-208ENST00000563410 SLC28A3Q9HAS3 691 aa24.42■■□□□ 1.5
CHD9-208ENST00000563410 ZBBXA8MT70 800 aa24.41■■□□□ 1.5
CHD9-208ENST00000563410 KLRF2D3W0D1 207 aa24.41■■□□□ 1.5
CHD9-208ENST00000563410 PITPNM1O00562 1244 aa24.41■■□□□ 1.5
CHD9-208ENST00000563410 CFBP00751 764 aa24.41■■□□□ 1.5
CHD9-208ENST00000563410 EIF2AK2P19525 551 aaKnown RBP24.41■■□□□ 1.5
CHD9-208ENST00000563410 HSD17B4P51659 736 aa24.41■■□□□ 1.5
CHD9-208ENST00000563410 SLC35G1Q2M3R5 365 aa24.41■■□□□ 1.5
CHD9-208ENST00000563410 ARHGEF16Q5VV41 709 aa24.41■■□□□ 1.5
CHD9-208ENST00000563410 KAT2BQ92831 832 aa24.41■■□□□ 1.5
CHD9-208ENST00000563410 CTAGE1Q96RT6 745 aa24.41■■□□□ 1.5
CHD9-208ENST00000563410 AMNQ9BXJ7 453 aa24.41■■□□□ 1.5
CHD9-208ENST00000563410 PRDM6Q9NQX0 595 aa24.41■■□□□ 1.5
CHD9-208ENST00000563410 PXMP2Q9NR77 195 aa24.41■■□□□ 1.5
CHD9-208ENST00000563410 SUPT16HQ9Y5B9 1047 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms