RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 FILIP1Q7Z7B0 1213 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 NUDT12Q9BQG2 462 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 FHDC1Q9C0D6 1143 aaPredicted RBP10.59□□□□□ -0.71
LINC00838-201ENST00000562956 CUEDC2Q9H467 287 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 SAMSN1Q9NSI8 373 aaKnown RBP10.59□□□□□ -0.71
LINC00838-201ENST00000562956 GPRC5DQ9NZD1 345 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 FEM1BQ9UK73 627 aa10.59□□□□□ -0.71
LINC00838-201ENST00000562956 CYP3A7-CYP3A51PA0A087WV96 503 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 SPDYE3A6NKU9 549 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 COBLO75128 1261 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 LMNB1P20700 586 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 CYP3A7P24462 503 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 FAM160B2Q86V87 743 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 CACTINQ8WUQ7 758 aaKnown RBP10.58□□□□□ -0.72
LINC00838-201ENST00000562956 TBC1D5Q92609 795 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 PNMA5Q96PV4 448 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 FZD1Q9UP38 647 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 PIK3CDO00329 1044 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 KLRC4O43908 158 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 SREBF1P36956 1147 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 EPS15P42566 896 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 UBASH3AP57075 661 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 CT47A1Q5JQC4 288 aaPredicted RBP10.58□□□□□ -0.72
LINC00838-201ENST00000562956 ZNF658Q5TYW1 1059 aaPredicted RBP10.58□□□□□ -0.72
LINC00838-201ENST00000562956 CALML4Q96GE6 196 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 MBOAT7Q96N66 472 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 MAP7D2Q96T17 732 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 NAP1L4Q99733 375 aaKnown RBP10.58□□□□□ -0.72
LINC00838-201ENST00000562956 RAB34Q9BZG1 259 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 KCNMB3Q9NPA1 279 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 RMND1Q9NWS8 449 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 GDAQ9Y2T3 454 aa10.58□□□□□ -0.72
LINC00838-201ENST00000562956 MARCH6O60337 910 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 FOSP01100 380 aaPredicted RBP10.57□□□□□ -0.72
LINC00838-201ENST00000562956 HIRAP54198 1017 aaPredicted RBP10.57□□□□□ -0.72
LINC00838-201ENST00000562956 KMT5BQ4FZB7 885 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 MCTP2Q6DN12 878 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 GPC2Q8N158 579 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 SNX29Q8TEQ0 813 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 MAGEF1Q9HAY2 307 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 BLOC1S4Q9NUP1 217 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 PCDHA12Q9UN75 941 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 CTNND2Q9UQB3 1225 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 SYNRGQ9UMZ2 1314 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 FAM86B1E9PN63 330 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 CFBP00751 764 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 MYL1P05976 194 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 FAM86B2P0C5J1 330 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 DHX8Q14562 1220 aaKnown RBP10.57□□□□□ -0.72
LINC00838-201ENST00000562956 ECM1Q16610 540 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 PRR16Q569H4 304 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 SPATA1Q5VX52 437 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 TMC6Q7Z403 805 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 FCHSD1Q86WN1 690 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 SMAP1Q8IYB5 467 aaPredicted RBP10.57□□□□□ -0.72
LINC00838-201ENST00000562956 TRIM9Q9C026 710 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 KIAA1683Q9H0B3 1180 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 INTS13Q9NVM9 706 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 MAPK8IP1Q9UQF2 711 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 MTMR2Q13614 643 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 PTPN21Q16825 1174 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 KRT79Q5XKE5 535 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 MOXD1Q6UVY6 613 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 LDHDQ86WU2 507 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 LRRC8AQ8IWT6 810 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 ETNPPLQ8TBG4 499 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 KIAA1524Q8TCG1 905 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 ZKSCAN4Q969J2 545 aaPredicted RBP10.57□□□□□ -0.72
LINC00838-201ENST00000562956 LENG9Q96B70 501 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 GGA3Q9NZ52 723 aa10.57□□□□□ -0.72
LINC00838-201ENST00000562956 CDK11BP21127 795 aaKnown RBP10.56□□□□□ -0.72
LINC00838-201ENST00000562956 PRCPP42785 496 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 MCM6Q14566 821 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 KCNB1Q14721 858 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 Q4G0T1 1027 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 KCNK18Q7Z418 384 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 APOBEC3FQ8IUX4 373 aaKnown RBP10.56□□□□□ -0.72
LINC00838-201ENST00000562956 CYP2W1Q8TAV3 490 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 LPAR1Q92633 364 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 CDK5RAP3Q96JB5 506 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 AGBL1Q96MI9 1066 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 C7orf25Q9BPX7 421 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 MYH7BA7E2Y1 1941 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 ZNF536O15090 1300 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 WDR46O15213 610 aaKnown RBP10.56□□□□□ -0.72
LINC00838-201ENST00000562956 CBFA2T2O43439 604 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 RHOBTB3O94955 611 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 STAT3P40763 770 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 TRAF1Q13077 416 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 TMEM119Q4V9L6 283 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 DCAF15Q66K64 600 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 GINM1Q9NU53 330 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 IMPACTQ9P2X3 320 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 STK17AQ9UEE5 414 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 ZNF112Q9UJU3 913 aa10.56□□□□□ -0.72
LINC00838-201ENST00000562956 GCOM1H8Y6P7 765 aaPredicted RBP10.55□□□□□ -0.72
LINC00838-201ENST00000562956 POLR2MP0CAP2 368 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 CIITAP33076 1130 aa10.55□□□□□ -0.72
LINC00838-201ENST00000562956 ASIC1P78348 528 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms