RNA–Protein interactions for RNA: ENST00000562946.5

TMEM87A-205, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-205ENST00000562946 COL20A1Q9P218 1284 aa10.19□□□□□ -0.78
TMEM87A-205ENST00000562946 PCDHA1Q9Y5I3 950 aa10.19□□□□□ -0.78
TMEM87A-205ENST00000562946 LTBP2Q14767 1821 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 PNMA6FA0A0J9YX94 578 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 CCDC69A6NI79 296 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 REC8O95072 547 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 SMPD1P17405 629 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 KIF5BP33176 963 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 HSD17B4P51659 736 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 SNX17Q15036 470 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 KCNA10Q16322 511 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 TMEM63BQ5T3F8 832 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 C1orf53Q5VUE5 145 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 IQSEC1Q6DN90 963 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 NFXL1Q6ZNB6 911 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 FBXO16Q8IX29 292 aaPredicted RBP10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 CTCFLQ8NI51 663 aaPredicted RBP10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 FERMT2Q96AC1 680 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 TCEANC2Q96MN5 208 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 TAAR1Q96RJ0 339 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 SPZ1Q9BXG8 430 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 PRO3102Q9H379 93 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 COLQQ9Y215 455 aaPredicted RBP10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 SNX14Q9Y5W7 946 aa10.18□□□□□ -0.78
TMEM87A-205ENST00000562946 RBM47A0AV96 593 aaKnown RBP10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 EPB41L2O43491 1005 aaKnown RBP10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 PLEKHA8P1O95397 391 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 CFBP00751 764 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 HMGB1P09429 215 aaKnown RBP10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 C6orf222P0C671 652 aaPredicted RBP10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 CALM1P0DP23 149 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 CALM2P0DP24 149 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 CALM3P0DP25 149 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 RXRAP19793 462 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 PTGS1P23219 599 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 GNAQP50148 359 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 ACLYP53396 1101 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 RTP1P59025 263 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 SRBD1Q8N5C6 995 aaKnown RBP10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 SAMD3Q8N6K7 520 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 FANCBQ8NB91 859 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 LZTS2Q9BRK4 669 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 WDR70Q9NW82 654 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 MAP3K20Q9NYL2 800 aaKnown RBP10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 BRPF3Q9ULD4 1205 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 ZMYND8Q9ULU4 1186 aaPredicted RBP10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 Q9Y3F1 56 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 SLC12A7Q9Y666 1083 aa10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 RANBP2P49792 3224 aaKnown RBP10.17□□□□□ -0.78
TMEM87A-205ENST00000562946 A0A1W2PQ45 241 aaPredicted RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 A0A1W2PQY0 241 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 MOXD2PA6NHM9 499 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 ASGR1P07306 291 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 CPA1P15085 419 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 SYN1P17600 705 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 PDE4DQ08499 809 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 TRAF1Q13077 416 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 DUSP28Q4G0W2 176 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 HABP4Q5JVS0 413 aaKnown RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 GNASQ5JWF2 1037 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 APOA5Q6Q788 366 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 NOL8Q76FK4 1167 aaKnown RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 TLK2Q86UE8 772 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 RAB11FIP4Q86YS3 637 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 CMTR1Q8N1G2 835 aaKnown RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 PCSK9Q8NBP7 692 aaKnown RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 NSUN6Q8TEA1 469 aaKnown RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 RMDN3Q96TC7 470 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 MPHOSPH6Q99547 160 aaKnown RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 USP26Q9BXU7 913 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 WDR11Q9BZH6 1224 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 SPC25Q9HBM1 224 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 DOCK5Q9H7D0 1870 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 SCN10AQ9Y5Y9 1956 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 TTLL13PA6NNM8 815 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 B4DLN1 442 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 DYNC1LI2O43237 492 aaPredicted RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 HOXA13P31271 388 aaPredicted RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 MRPL12P52815 198 aaKnown RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 BEX3Q00994 111 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 TRIM60Q495X7 471 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 TMTC3Q6ZXV5 915 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 MICU3Q86XE3 530 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 SP7Q8TDD2 431 aaPredicted RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 PIBF1Q8WXW3 757 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 RRP36Q96EU6 259 aaKnown RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 JAKMIP1Q96N16 626 aaKnown RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 IWS1Q96ST2 819 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 GDF15Q99988 308 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 PXMP2Q9NR77 195 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 PCDH10Q9P2E7 1040 aa10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 RBM27Q9P2N5 1060 aaKnown RBP10.16□□□□□ -0.78
TMEM87A-205ENST00000562946 ELP1O95163 1332 aa10.15□□□□□ -0.78
TMEM87A-205ENST00000562946 ZBTB43O43298 467 aa10.15□□□□□ -0.79
TMEM87A-205ENST00000562946 GALR2O43603 387 aaPredicted RBP10.15□□□□□ -0.79
TMEM87A-205ENST00000562946 NR3C2P08235 984 aa10.15□□□□□ -0.79
TMEM87A-205ENST00000562946 EIF2AK2P19525 551 aaKnown RBP10.15□□□□□ -0.79
TMEM87A-205ENST00000562946 STXBP2Q15833 593 aa10.15□□□□□ -0.79
TMEM87A-205ENST00000562946 FSCN1Q16658 493 aaKnown RBP10.15□□□□□ -0.79
TMEM87A-205ENST00000562946 ARHGEF16Q5VV41 709 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms