RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 CYB5R4Q7L1T6 521 aa10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CHST3Q7LGC8 479 aa10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 TLK2Q86UE8 772 aa10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 FBXO16Q8IX29 292 aaPredicted RBP10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 VTA1Q9NP79 307 aa10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 MRPL11Q9Y3B7 192 aaKnown RBP10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 MCM3APO60318 1980 aa10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 SMCHD1A6NHR9 2005 aa10.82□□□□□ -0.68
CHRFAM7A-204ENST00000562729 DYNC1LI2O43237 492 aaPredicted RBP10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ADAMTS4O75173 837 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ASGR1P07306 291 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 BMP8BP34820 402 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 RPS6P62753 249 aaKnown RBP10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 QRICH1Q2TAL8 776 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 BRDTQ58F21 947 aaPredicted RBP10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 BMP2KLQ5H9B9 411 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 IQSEC1Q6DN90 963 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 HOMER1Q86YM7 354 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 TDHQ8IZJ6 230 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 MAP4K1Q92918 833 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 FGD4Q96M96 766 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 PURBQ96QR8 312 aaKnown RBP10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 GDF15Q99988 308 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ESYT1Q9BSJ8 1104 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 AMNQ9BXJ7 453 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 TMEM39AQ9NV64 488 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 MROH7Q68CQ1 1323 aa10.81□□□□□ -0.68
CHRFAM7A-204ENST00000562729 MYH6P13533 1939 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 LOC102724159A0A0B4J2E5 919 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CCDC69A6NI79 296 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 TLR3O15455 904 aaKnown RBP10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CLTBP09497 229 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 RAG1P15918 1043 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 KIF5BP33176 963 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 MCM5P33992 734 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 GJA9P57773 515 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 BEX3Q00994 111 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 TLE2Q04725 743 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 PWP2Q15269 919 aaKnown RBP10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 FSCN1Q16658 493 aaKnown RBP10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ARHGEF16Q5VV41 709 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 DNERQ8NFT8 737 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CTCFLQ8NI51 663 aaPredicted RBP10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CLEC4DQ8WXI8 215 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 WDR11Q9BZH6 1224 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 JMJD4Q9H9V9 463 aa10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 DDX49Q9Y6V7 483 aaKnown RBP10.8□□□□□ -0.68
CHRFAM7A-204ENST00000562729 A0A0U1RQG5 324 aaPredicted RBP10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 MYADML2A6NDP7 307 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ZBTB5O15062 677 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 PRC1O43663 620 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CDC45O75419 566 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CFBP00751 764 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 SMPD1P17405 629 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CST5P28325 142 aaPredicted RBP10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CPT1AP50416 773 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 DSG2Q14126 1118 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 SNX17Q15036 470 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 PPP2R5BQ15173 497 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 SEC23AQ15436 765 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 C1orf53Q5VUE5 145 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 SYNE3Q6ZMZ3 975 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 STAG2Q8N3U4 1231 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 KLHDC9Q8NEP7 349 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 NSUN6Q8TEA1 469 aaKnown RBP10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 PIBF1Q8WXW3 757 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 PDGFCQ9NRA1 345 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 SEC63Q9UGP8 760 aaKnown RBP10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 PCDHA1Q9Y5I3 950 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ELP1O95163 1332 aa10.79□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ADCY6O43306 1168 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CABYRO75952 493 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 FGD1P98174 961 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 GRM4Q14833 912 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CREB3L3Q68CJ9 461 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 CXCL17Q6UXB2 119 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 SKAP1Q86WV1 359 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 TMTC2Q8N394 836 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 RGS22Q8NE09 1264 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 OR6J1Q8NGC5 347 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 SCFD2Q8WU76 684 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 BADQ92934 168 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 KCTD12Q96CX2 325 aaKnown RBP10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 RMDN3Q96TC7 470 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 MAF1Q9H063 256 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 KATNBL1Q9H079 304 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 LSG1Q9H089 658 aaKnown RBP10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 UPF3AQ9H1J1 476 aaKnown RBP10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 PRO3102Q9H379 93 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 PDLIM7Q9NR12 457 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 MAD2L2Q9UI95 211 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 ASTN1O14525 1302 aa10.78□□□□□ -0.68
CHRFAM7A-204ENST00000562729 PALM3A6NDB9 673 aaPredicted RBP10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SLC27A2O14975 620 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 NKRFO15226 690 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MYL3P08590 195 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CALM1P0DP23 149 aa10.77□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CALM2P0DP24 149 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms