RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 hCG_1984214I3L0E3 225 aa18.91■□□□□ 0.62
PKD1-226ENST00000562425 DNM1LO00429 736 aa18.91■□□□□ 0.62
PKD1-226ENST00000562425 DUSP11O75319 330 aaKnown RBP18.91■□□□□ 0.62
PKD1-226ENST00000562425 EDNRBP24530 442 aa18.91■□□□□ 0.62
PKD1-226ENST00000562425 AKAP17AQ02040 695 aaKnown RBP18.91■□□□□ 0.62
PKD1-226ENST00000562425 FUT2Q10981 343 aa18.91■□□□□ 0.62
PKD1-226ENST00000562425 EEPD1Q7L9B9 569 aa18.91■□□□□ 0.62
PKD1-226ENST00000562425 HEATR3Q7Z4Q2 680 aa18.91■□□□□ 0.62
PKD1-226ENST00000562425 ZNF713Q8N859 430 aaPredicted RBP18.91■□□□□ 0.62
PKD1-226ENST00000562425 C11orf49Q9H6J7 331 aa18.91■□□□□ 0.62
PKD1-226ENST00000562425 UPF2Q9HAU5 1272 aaKnown RBP18.91■□□□□ 0.62
PKD1-226ENST00000562425 NID2Q14112 1375 aa18.91■□□□□ 0.62
PKD1-226ENST00000562425 hCG_1642624A0A1W2PR95 340 aa18.9■□□□□ 0.62
PKD1-226ENST00000562425 MYCNP04198 464 aaPredicted RBP18.9■□□□□ 0.62
PKD1-226ENST00000562425 HOXA13P31271 388 aaPredicted RBP18.9■□□□□ 0.62
PKD1-226ENST00000562425 TNFAIP2Q03169 654 aa18.9■□□□□ 0.62
PKD1-226ENST00000562425 STXBP2Q15833 593 aa18.9■□□□□ 0.62
PKD1-226ENST00000562425 CPLX2Q6PUV4 134 aaKnown RBP18.9■□□□□ 0.62
PKD1-226ENST00000562425 NOL8Q76FK4 1167 aaKnown RBP18.9■□□□□ 0.62
PKD1-226ENST00000562425 TEX2Q8IWB9 1127 aa18.9■□□□□ 0.62
PKD1-226ENST00000562425 DIS3LQ8TF46 1054 aaKnown RBP18.9■□□□□ 0.62
PKD1-226ENST00000562425 GDF15Q99988 308 aa18.9■□□□□ 0.62
PKD1-226ENST00000562425 PSTPIP2Q9H939 334 aa18.9■□□□□ 0.62
PKD1-226ENST00000562425 COL20A1Q9P218 1284 aa18.9■□□□□ 0.62
PKD1-226ENST00000562425 CUL9Q8IWT3 2517 aa18.9■□□□□ 0.62
PKD1-226ENST00000562425 CPLX1O14810 134 aa18.89■□□□□ 0.61
PKD1-226ENST00000562425 MNX1P50219 401 aaPredicted RBP18.89■□□□□ 0.61
PKD1-226ENST00000562425 CCT2P78371 535 aaKnown RBP18.89■□□□□ 0.61
PKD1-226ENST00000562425 TAPT1Q6NXT6 567 aa18.89■□□□□ 0.61
PKD1-226ENST00000562425 PPP1R18Q6NYC8 613 aa18.89■□□□□ 0.61
PKD1-226ENST00000562425 FCHSD1Q86WN1 690 aa18.89■□□□□ 0.61
PKD1-226ENST00000562425 FBXO16Q8IX29 292 aaPredicted RBP18.89■□□□□ 0.61
PKD1-226ENST00000562425 SMARCC2Q8TAQ2 1214 aa18.89■□□□□ 0.61
PKD1-226ENST00000562425 PXMP2Q9NR77 195 aa18.89■□□□□ 0.61
PKD1-226ENST00000562425 PIK3CDO00329 1044 aa18.88■□□□□ 0.61
PKD1-226ENST00000562425 PRPF3O43395 683 aaKnown RBP18.88■□□□□ 0.61
PKD1-226ENST00000562425 PGK1P00558 417 aa18.88■□□□□ 0.61
PKD1-226ENST00000562425 NR3C2P08235 984 aa18.88■□□□□ 0.61
PKD1-226ENST00000562425 EIF2AK2P19525 551 aaKnown RBP18.88■□□□□ 0.61
PKD1-226ENST00000562425 ADCYAP1R1P41586 468 aa18.88■□□□□ 0.61
PKD1-226ENST00000562425 NEK4P51957 841 aa18.88■□□□□ 0.61
PKD1-226ENST00000562425 NAPAP54920 295 aa18.88■□□□□ 0.61
PKD1-226ENST00000562425 LRRC41Q15345 812 aa18.88■□□□□ 0.61
PKD1-226ENST00000562425 GJC2Q5T442 439 aaPredicted RBP18.88■□□□□ 0.61
PKD1-226ENST00000562425 C7orf61Q8IZ16 206 aa18.88■□□□□ 0.61
PKD1-226ENST00000562425 SCFD2Q8WU76 684 aa18.88■□□□□ 0.61
PKD1-226ENST00000562425 AP5M1Q9H0R1 490 aa18.88■□□□□ 0.61
PKD1-226ENST00000562425 Q9Y3F1 56 aa18.88■□□□□ 0.61
PKD1-226ENST00000562425 DDX49Q9Y6V7 483 aaKnown RBP18.88■□□□□ 0.61
PKD1-226ENST00000562425 RBM47A0AV96 593 aaKnown RBP18.87■□□□□ 0.61
PKD1-226ENST00000562425 SOX1O00570 391 aaPredicted RBP18.87■□□□□ 0.61
PKD1-226ENST00000562425 EIF3JO75822 258 aaKnown RBP18.87■□□□□ 0.61
PKD1-226ENST00000562425 COL6A1P12109 1028 aa18.87■□□□□ 0.61
PKD1-226ENST00000562425 IFNAR1P17181 557 aa18.87■□□□□ 0.61
PKD1-226ENST00000562425 WWC2Q6AWC2 1192 aa18.87■□□□□ 0.61
PKD1-226ENST00000562425 TRIM22Q8IYM9 498 aa18.87■□□□□ 0.61
PKD1-226ENST00000562425 SLC17A8Q8NDX2 589 aa18.87■□□□□ 0.61
PKD1-226ENST00000562425 CCDC12Q8WUD4 166 aaPredicted RBP18.87■□□□□ 0.61
PKD1-226ENST00000562425 GPKOWQ92917 476 aaPredicted RBP eCLIP18.87■□□□□ 0.61
PKD1-226ENST00000562425 TSEN34Q9BSV6 310 aaKnown RBP18.87■□□□□ 0.61
PKD1-226ENST00000562425 RNF26Q9BY78 433 aaPredicted RBP18.87■□□□□ 0.61
PKD1-226ENST00000562425 C22orf23Q9BZE7 217 aa18.87■□□□□ 0.61
PKD1-226ENST00000562425 WDR11Q9BZH6 1224 aa18.87■□□□□ 0.61
PKD1-226ENST00000562425 GLT8D2Q9H1C3 349 aa18.87■□□□□ 0.61
PKD1-226ENST00000562425 SLKQ9H2G2 1235 aaPredicted RBP18.87■□□□□ 0.61
PKD1-226ENST00000562425 PDGFCQ9NRA1 345 aa18.87■□□□□ 0.61
PKD1-226ENST00000562425 SYNRGQ9UMZ2 1314 aa18.86■□□□□ 0.61
PKD1-226ENST00000562425 NKRFO15226 690 aaKnown RBP eCLIP18.86■□□□□ 0.61
PKD1-226ENST00000562425 ADAMTS4O75173 837 aa18.86■□□□□ 0.61
PKD1-226ENST00000562425 C6orf222P0C671 652 aaPredicted RBP18.86■□□□□ 0.61
PKD1-226ENST00000562425 SMPD1P17405 629 aa18.86■□□□□ 0.61
PKD1-226ENST00000562425 AK2P54819 239 aa18.86■□□□□ 0.61
PKD1-226ENST00000562425 GJA9P57773 515 aa18.86■□□□□ 0.61
PKD1-226ENST00000562425 TTLL4Q14679 1199 aa18.86■□□□□ 0.61
PKD1-226ENST00000562425 NTRK3Q16288 839 aa18.86■□□□□ 0.61
PKD1-226ENST00000562425 PFKFB3Q16875 520 aaPredicted RBP18.86■□□□□ 0.61
PKD1-226ENST00000562425 DUSP28Q4G0W2 176 aa18.86■□□□□ 0.61
PKD1-226ENST00000562425 USP17L6PQ6QN14 398 aa18.86■□□□□ 0.61
PKD1-226ENST00000562425 PCSK9Q8NBP7 692 aaKnown RBP18.86■□□□□ 0.61
PKD1-226ENST00000562425 LENG1Q96BZ8 264 aaPredicted RBP18.86■□□□□ 0.61
PKD1-226ENST00000562425 PDCD2LQ9BRP1 358 aa18.86■□□□□ 0.61
PKD1-226ENST00000562425 LARP6Q9BRS8 491 aaKnown RBP18.86■□□□□ 0.61
PKD1-226ENST00000562425 SENP6Q9GZR1 1112 aaPredicted RBP18.86■□□□□ 0.61
PKD1-226ENST00000562425 UPF3AQ9H1J1 476 aaKnown RBP18.86■□□□□ 0.61
PKD1-226ENST00000562425 NCOA5Q9HCD5 579 aaKnown RBP18.86■□□□□ 0.61
PKD1-226ENST00000562425 BARHL2Q9NY43 387 aa18.86■□□□□ 0.61
PKD1-226ENST00000562425 MCM3APO60318 1980 aa18.86■□□□□ 0.61
PKD1-226ENST00000562425 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.85■□□□□ 0.61
PKD1-226ENST00000562425 MEIS2O14770 477 aa18.85■□□□□ 0.61
PKD1-226ENST00000562425 CDKL5O76039 1030 aa18.85■□□□□ 0.61
PKD1-226ENST00000562425 MYCLP12524 364 aaPredicted RBP18.85■□□□□ 0.61
PKD1-226ENST00000562425 SCG2P13521 617 aa18.85■□□□□ 0.61
PKD1-226ENST00000562425 CCND2P30279 289 aa18.85■□□□□ 0.61
PKD1-226ENST00000562425 STK3Q13188 491 aa18.85■□□□□ 0.61
PKD1-226ENST00000562425 PGM5Q15124 567 aa18.85■□□□□ 0.61
PKD1-226ENST00000562425 LRIT3Q3SXY7 679 aa18.85■□□□□ 0.61
PKD1-226ENST00000562425 VSIG10LQ86VR7 867 aa18.85■□□□□ 0.61
PKD1-226ENST00000562425 LRCH3Q96II8 777 aa18.85■□□□□ 0.61
PKD1-226ENST00000562425 SLC26A6Q9BXS9 759 aa18.85■□□□□ 0.61
PKD1-226ENST00000562425 PHF24Q9UPV7 400 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 1021.8 ms