RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 SYMPKQ92797 1274 aaKnown RBP16.17■□□□□ 0.18
COMMD4-205ENST00000562310 WNK4Q96J92 1243 aa16.17■□□□□ 0.18
COMMD4-205ENST00000562310 TRERF1Q96PN7 1200 aa16.17■□□□□ 0.18
COMMD4-205ENST00000562310 MTMR9Q96QG7 549 aa16.17■□□□□ 0.18
COMMD4-205ENST00000562310 SDF4Q9BRK5 362 aa16.17■□□□□ 0.18
COMMD4-205ENST00000562310 TSPY26PQ9H489 355 aa16.17■□□□□ 0.18
COMMD4-205ENST00000562310 RNF146Q9NTX7 359 aa16.17■□□□□ 0.18
COMMD4-205ENST00000562310 ZNF214Q9UL59 606 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-205ENST00000562310 FSD2A1L4K1 749 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 NFIBO00712 420 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 TBX3O15119 743 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 SLC37A4O43826 429 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 CCDC192P0DO97 292 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 OSBPP22059 807 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 COPB2P35606 906 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 FXR2P51116 673 aaKnown RBP eCLIP16.16■□□□□ 0.18
COMMD4-205ENST00000562310 CAMK4Q16566 473 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 Q4G0T1 1027 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 KRBA2Q6ZNG9 492 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 FCHSD1Q86WN1 690 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 FRMPD4Q14CM0 1322 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 RPTORQ8N122 1335 aa16.16■□□□□ 0.18
COMMD4-205ENST00000562310 EDIL3O43854 480 aa16.15■□□□□ 0.18
COMMD4-205ENST00000562310 ZBTB48P10074 688 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-205ENST00000562310 CETPP11597 493 aa16.15■□□□□ 0.18
COMMD4-205ENST00000562310 GTF2A2P52657 109 aa16.15■□□□□ 0.18
COMMD4-205ENST00000562310 MOGSQ13724 837 aa16.15■□□□□ 0.18
COMMD4-205ENST00000562310 TMEM132BQ14DG7 1078 aa16.15■□□□□ 0.18
COMMD4-205ENST00000562310 IL17AQ16552 155 aa16.15■□□□□ 0.18
COMMD4-205ENST00000562310 SPECC1Q5M775 1068 aa16.15■□□□□ 0.18
COMMD4-205ENST00000562310 L1TD1Q5T7N2 865 aaKnown RBP16.15■□□□□ 0.18
COMMD4-205ENST00000562310 SLFN12Q8IYM2 578 aa16.15■□□□□ 0.18
COMMD4-205ENST00000562310 ZNF526Q8TF50 670 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-205ENST00000562310 P2RX7Q99572 595 aaKnown RBP16.15■□□□□ 0.18
COMMD4-205ENST00000562310 ACAD9Q9H845 621 aa16.15■□□□□ 0.18
COMMD4-205ENST00000562310 FBXO40Q9UH90 709 aa16.15■□□□□ 0.18
COMMD4-205ENST00000562310 PNMA3Q9UL41 463 aa16.15■□□□□ 0.18
COMMD4-205ENST00000562310 SLC45A1Q9Y2W3 748 aa16.15■□□□□ 0.18
COMMD4-205ENST00000562310 POLR2DO15514 142 aaKnown RBP16.14■□□□□ 0.17
COMMD4-205ENST00000562310 SLC26A4O43511 780 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 MARCH6O60337 910 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 GJA5P36382 358 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 ZNF76P36508 570 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 STAT3P40763 770 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 UBA7P41226 1012 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 SETQ01105 290 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-205ENST00000562310 MUM1L1Q5H9M0 696 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 SASS6Q6UVJ0 657 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 RNF207Q6ZRF8 634 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 IGSF22Q8N9C0 903 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 CNNM3Q8NE01 707 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 CHST13Q8NET6 341 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 EPSTI1Q96J88 318 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 FAM20AQ96MK3 541 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 CCSER1Q9C0I3 900 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 ASCC2Q9H1I8 757 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-205ENST00000562310 KCNMB3Q9NPA1 279 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 HOMER2Q9NSB8 354 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 CCDC39Q9UFE4 941 aa16.14■□□□□ 0.17
COMMD4-205ENST00000562310 ITGBL1O95965 494 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-205ENST00000562310 HERVK_113P62684 666 aa16.13■□□□□ 0.17
COMMD4-205ENST00000562310 FMR1Q06787 632 aaKnown RBP eCLIP16.13■□□□□ 0.17
COMMD4-205ENST00000562310 PDIA5Q14554 519 aa16.13■□□□□ 0.17
COMMD4-205ENST00000562310 XRRA1Q6P2D8 792 aa16.13■□□□□ 0.17
COMMD4-205ENST00000562310 USP49Q70CQ1 688 aa16.13■□□□□ 0.17
COMMD4-205ENST00000562310 RIOX2Q8IUF8 465 aa16.13■□□□□ 0.17
COMMD4-205ENST00000562310 CKAP2LQ8IYA6 745 aa16.13■□□□□ 0.17
COMMD4-205ENST00000562310 CEP57L1Q8IYX8 460 aa16.13■□□□□ 0.17
COMMD4-205ENST00000562310 IQUBQ8NA54 791 aa16.13■□□□□ 0.17
COMMD4-205ENST00000562310 SYTL5Q8TDW5 730 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-205ENST00000562310 TBC1D5Q92609 795 aa16.13■□□□□ 0.17
COMMD4-205ENST00000562310 FUCA2Q9BTY2 467 aa16.13■□□□□ 0.17
COMMD4-205ENST00000562310 STK24Q9Y6E0 443 aa16.13■□□□□ 0.17
COMMD4-205ENST00000562310 ACTN4O43707 911 aaKnown RBP16.12■□□□□ 0.17
COMMD4-205ENST00000562310 CAVIN2O95810 425 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 SLFN14P0C7P3 912 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 TXKP42681 527 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 MRE11P49959 708 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 RPS6P62753 249 aaKnown RBP16.12■□□□□ 0.17
COMMD4-205ENST00000562310 PLS1Q14651 629 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 ZRSR1Q15695 479 aaKnown RBP16.12■□□□□ 0.17
COMMD4-205ENST00000562310 LONRF3Q496Y0 759 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 PRR16Q569H4 304 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 GPAT2Q6NUI2 795 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 NSMFQ6X4W1 530 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 NIPA1Q7RTP0 329 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 CUEDC2Q9H467 287 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 MAGEF1Q9HAY2 307 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 PFASO15067 1338 aa16.12■□□□□ 0.17
COMMD4-205ENST00000562310 SLC25A27O95847 323 aa16.11■□□□□ 0.17
COMMD4-205ENST00000562310 TYRO3Q06418 890 aa16.11■□□□□ 0.17
COMMD4-205ENST00000562310 STX1AQ16623 288 aa16.11■□□□□ 0.17
COMMD4-205ENST00000562310 SPRYD7Q5W111 196 aa16.11■□□□□ 0.17
COMMD4-205ENST00000562310 PCNX4Q63HM2 1172 aa16.11■□□□□ 0.17
COMMD4-205ENST00000562310 SLC30A10Q6XR72 485 aa16.11■□□□□ 0.17
COMMD4-205ENST00000562310 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.11■□□□□ 0.17
COMMD4-205ENST00000562310 ANKRD23Q86SG2 305 aa16.11■□□□□ 0.17
COMMD4-205ENST00000562310 CABP7Q86V35 215 aa16.11■□□□□ 0.17
COMMD4-205ENST00000562310 GAS2L3Q86XJ1 694 aa16.11■□□□□ 0.17
COMMD4-205ENST00000562310 PDILTQ8N807 584 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms