RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 FOXD4L6Q3SYB3 417 aaPredicted RBP25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 FOXD4L3Q6VB84 417 aaPredicted RBP25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 HEATR3Q7Z4Q2 680 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 BRAPQ7Z569 592 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 CCDC148Q8NFR7 591 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 PHF20Q9BVI0 1012 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 BARHL2Q9NY43 387 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 POTEB2H3BUK9 544 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 MCM4P33991 863 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 MTFR1Q15390 333 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 CCDC12Q8WUD4 166 aaPredicted RBP25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 ARMC5Q96C12 935 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 SHISA4Q96DD7 197 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 ABHD8Q96I13 439 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 BRMS1Q9HCU9 246 aa25.71■■□□□ 1.71
SYNGR3-202ENST00000562045 CFBP00751 764 aa25.7■■□□□ 1.7
SYNGR3-202ENST00000562045 HOXA13P31271 388 aaPredicted RBP25.7■■□□□ 1.7
SYNGR3-202ENST00000562045 DIS3L2Q8IYB7 885 aaKnown RBP25.7■■□□□ 1.7
SYNGR3-202ENST00000562045 ZNF333Q96JL9 665 aa25.7■■□□□ 1.7
SYNGR3-202ENST00000562045 BIN2Q9UBW5 565 aaPredicted RBP25.7■■□□□ 1.7
SYNGR3-202ENST00000562045 HMGCRP04035 888 aa25.69■■□□□ 1.7
SYNGR3-202ENST00000562045 U2AF2P26368 475 aaKnown RBP eCLIP25.69■■□□□ 1.7
SYNGR3-202ENST00000562045 FOXP1Q9H334 677 aaPredicted RBP25.69■■□□□ 1.7
SYNGR3-202ENST00000562045 DIS3Q9Y2L1 958 aaKnown RBP25.69■■□□□ 1.7
SYNGR3-202ENST00000562045 DDX11L8A8MPP1 907 aa25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 STXBP3O00186 592 aa25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 NLRP5P59047 1200 aa25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 DNM1Q05193 864 aaKnown RBP25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 CACNB2Q08289 660 aaPredicted RBP25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 OLFML2BQ68BL8 750 aa25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 SYTL5Q8TDW5 730 aaPredicted RBP25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 KIF28PB7ZC32 967 aa25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 HSD17B4P51659 736 aa25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 KRT85P78386 507 aa25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 GHRHRQ02643 423 aa25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 PRAMEF19Q5SWL8 479 aa25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 SLC5A4Q9NY91 659 aa25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 LRRC37A2A6NM11 1700 aa25.68■■□□□ 1.7
SYNGR3-202ENST00000562045 ADAMTS3O15072 1205 aa25.67■■□□□ 1.7
SYNGR3-202ENST00000562045 KRT2P35908 639 aa25.67■■□□□ 1.7
SYNGR3-202ENST00000562045 FAM173BQ6P4H8 233 aa25.67■■□□□ 1.7
SYNGR3-202ENST00000562045 MCF2L2Q86YR7 1114 aa25.67■■□□□ 1.7
SYNGR3-202ENST00000562045 TRPV1Q8NER1 839 aa25.67■■□□□ 1.7
SYNGR3-202ENST00000562045 CHAMP1Q96JM3 812 aa25.67■■□□□ 1.7
SYNGR3-202ENST00000562045 TAAR1Q96RJ0 339 aa25.67■■□□□ 1.7
SYNGR3-202ENST00000562045 TINF2Q9BSI4 451 aa25.67■■□□□ 1.7
SYNGR3-202ENST00000562045 BTBD18B2RXH4 712 aa25.66■■□□□ 1.7
SYNGR3-202ENST00000562045 PRKAR2AP13861 404 aaKnown RBP25.66■■□□□ 1.7
SYNGR3-202ENST00000562045 NAPAP54920 295 aa25.66■■□□□ 1.7
SYNGR3-202ENST00000562045 MAP3K21Q5TCX8 1036 aa25.66■■□□□ 1.7
SYNGR3-202ENST00000562045 GALNT17Q6IS24 598 aa25.66■■□□□ 1.7
SYNGR3-202ENST00000562045 UNC93B1Q9H1C4 597 aa25.66■■□□□ 1.7
SYNGR3-202ENST00000562045 SNAI1O95863 264 aaPredicted RBP25.66■■□□□ 1.7
SYNGR3-202ENST00000562045 NCLP19338 710 aaKnown RBP25.66■■□□□ 1.7
SYNGR3-202ENST00000562045 ATL3Q6DD88 541 aa25.66■■□□□ 1.7
SYNGR3-202ENST00000562045 PPP1R18Q6NYC8 613 aa25.66■■□□□ 1.7
SYNGR3-202ENST00000562045 USP17L6PQ6QN14 398 aa25.66■■□□□ 1.7
SYNGR3-202ENST00000562045 NOSTRINQ8IVI9 506 aa25.66■■□□□ 1.7
SYNGR3-202ENST00000562045 MEIS2O14770 477 aa25.65■■□□□ 1.7
SYNGR3-202ENST00000562045 CCND3P30281 292 aaPredicted RBP25.65■■□□□ 1.7
SYNGR3-202ENST00000562045 TRAF1Q13077 416 aa25.65■■□□□ 1.7
SYNGR3-202ENST00000562045 MAMDC4Q6UXC1 1216 aa25.65■■□□□ 1.7
SYNGR3-202ENST00000562045 ZNF467Q7Z7K2 595 aaPredicted RBP25.65■■□□□ 1.7
SYNGR3-202ENST00000562045 TRMT44Q8IYL2 757 aaKnown RBP25.65■■□□□ 1.7
SYNGR3-202ENST00000562045 ZNF396Q96N95 335 aaPredicted RBP25.65■■□□□ 1.7
SYNGR3-202ENST00000562045 PTMSP20962 102 aa25.64■■□□□ 1.7
SYNGR3-202ENST00000562045 ALDH5A1P51649 535 aaPredicted RBP25.64■■□□□ 1.7
SYNGR3-202ENST00000562045 NPY5RQ15761 445 aa25.64■■□□□ 1.7
SYNGR3-202ENST00000562045 MYSM1Q5VVJ2 828 aa25.64■■□□□ 1.7
SYNGR3-202ENST00000562045 ZMYND12Q9H0C1 365 aa25.64■■□□□ 1.7
SYNGR3-202ENST00000562045 CFAP45Q9UL16 551 aa25.64■■□□□ 1.7
SYNGR3-202ENST00000562045 PCDHA4Q9UN74 947 aa25.64■■□□□ 1.7
SYNGR3-202ENST00000562045 ESYT2A0FGR8 921 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 CCL5P13501 91 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 UBE2SQ16763 222 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 MFSD14CQ5VZR4 134 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 ARMCX2Q7L311 632 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 DAGLBQ8NCG7 672 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 OXER1Q8TDS5 423 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 CNPY2Q9Y2B0 182 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 GCOM1H8Y6P7 765 aaPredicted RBP25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 POLR2MP0CAP2 368 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 GNA11P29992 359 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 NR5A1Q13285 461 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 CSPP1Q1MSJ5 1256 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 FCHSD1Q86WN1 690 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 PSTPIP2Q9H939 334 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 C6orf50Q9HD87 102 aa25.63■■□□□ 1.69
SYNGR3-202ENST00000562045 CYBAP13498 195 aa25.62■■□□□ 1.69
SYNGR3-202ENST00000562045 UBXN2AP68543 259 aa25.62■■□□□ 1.69
SYNGR3-202ENST00000562045 BLIDQ8IZY5 108 aa25.62■■□□□ 1.69
SYNGR3-202ENST00000562045 SCAND2PQ9GZW5 306 aaPredicted RBP25.62■■□□□ 1.69
SYNGR3-202ENST00000562045 KATNBL1Q9H079 304 aa25.62■■□□□ 1.69
SYNGR3-202ENST00000562045 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.62■■□□□ 1.69
SYNGR3-202ENST00000562045 SYNGAP1Q96PV0 1343 aa25.61■■□□□ 1.69
SYNGR3-202ENST00000562045 SMCO2A6NFE2 343 aa25.61■■□□□ 1.69
SYNGR3-202ENST00000562045 RMDN3Q96TC7 470 aa25.61■■□□□ 1.69
SYNGR3-202ENST00000562045 FIBPO43427 364 aa25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 EIF2AK2P19525 551 aaKnown RBP25.6■■□□□ 1.69
SYNGR3-202ENST00000562045 EEPD1Q7L9B9 569 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms