RNA–Protein interactions for RNA: ENST00000561823.1

MAP1LC3B-202, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-202ENST00000561823 HSD17B4P51659 736 aa20.14■□□□□ 0.81
MAP1LC3B-202ENST00000561823 GHRHRQ02643 423 aa20.14■□□□□ 0.81
MAP1LC3B-202ENST00000561823 FAM109BQ6ICB4 259 aaPredicted RBP20.14■□□□□ 0.81
MAP1LC3B-202ENST00000561823 CATIPQ7Z7H3 387 aa20.14■□□□□ 0.81
MAP1LC3B-202ENST00000561823 SKAP1Q86WV1 359 aa20.14■□□□□ 0.81
MAP1LC3B-202ENST00000561823 MTA3Q9BTC8 594 aa20.14■□□□□ 0.81
MAP1LC3B-202ENST00000561823 PCDHA1Q9Y5I3 950 aa20.14■□□□□ 0.81
MAP1LC3B-202ENST00000561823 CYTH3O43739 400 aa20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 CFBP00751 764 aa20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 TXNP10599 105 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 PSMC6P62333 389 aa20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 PURAQ00577 322 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 TRAF1Q13077 416 aa20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 TTLL4Q14679 1199 aa20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 NECTIN1Q15223 517 aa20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 STXBP2Q15833 593 aa20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 ARHGEF16Q5VV41 709 aa20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 CCDC62Q6P9F0 684 aa20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 PIGSQ96S52 555 aa20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 LY9Q9HBG7 655 aa20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 MTMR10Q9NXD2 777 aa20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 MAP3K20Q9NYL2 800 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-202ENST00000561823 A6NJR5 290 aa20.12■□□□□ 0.81
MAP1LC3B-202ENST00000561823 SLC27A2O14975 620 aa20.12■□□□□ 0.81
MAP1LC3B-202ENST00000561823 ARIH2O95376 493 aa20.12■□□□□ 0.81
MAP1LC3B-202ENST00000561823 BRDTQ58F21 947 aaPredicted RBP20.12■□□□□ 0.81
MAP1LC3B-202ENST00000561823 HOMER1Q86YM7 354 aa20.12■□□□□ 0.81
MAP1LC3B-202ENST00000561823 SAMD3Q8N6K7 520 aa20.12■□□□□ 0.81
MAP1LC3B-202ENST00000561823 COPS5Q92905 334 aa20.12■□□□□ 0.81
MAP1LC3B-202ENST00000561823 RNPC3Q96LT9 517 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-202ENST00000561823 MAP3K14Q99558 947 aa20.12■□□□□ 0.81
MAP1LC3B-202ENST00000561823 PNMA6FA0A0J9YX94 578 aa20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 PRC1O43663 620 aa20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 KPNA6O60684 536 aa20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 MYL3P08590 195 aa20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 MCM5P33992 734 aa20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 SMAD3P84022 425 aaKnown RBP20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 CREB3L3Q68CJ9 461 aa20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 CASC1Q6TDU7 716 aa20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 SEPT14Q6ZU15 432 aa20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 MTG1Q9BT17 334 aaPredicted RBP20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 PPP1R12CQ9BZL4 782 aa20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 TRPV6Q9H1D0 765 aa20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 ANO2Q9NQ90 1003 aa20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 GPHNQ9NQX3 736 aaPredicted RBP20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 PXMP2Q9NR77 195 aa20.11■□□□□ 0.81
MAP1LC3B-202ENST00000561823 B4GALT4O60513 344 aa20.1■□□□□ 0.81
MAP1LC3B-202ENST00000561823 EIF3JO75822 258 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3B-202ENST00000561823 NR3C2P08235 984 aa20.1■□□□□ 0.81
MAP1LC3B-202ENST00000561823 CSF2RAP15509 400 aa20.1■□□□□ 0.81
MAP1LC3B-202ENST00000561823 EIF2AK2P19525 551 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3B-202ENST00000561823 PPIGQ13427 754 aaKnown RBP eCLIP20.1■□□□□ 0.81
MAP1LC3B-202ENST00000561823 ZNF654Q8IZM8 581 aa20.1■□□□□ 0.81
MAP1LC3B-202ENST00000561823 TMTC2Q8N394 836 aa20.1■□□□□ 0.81
MAP1LC3B-202ENST00000561823 TMEM199Q8N511 208 aa20.1■□□□□ 0.81
MAP1LC3B-202ENST00000561823 TMEM87BQ96K49 555 aa20.1■□□□□ 0.81
MAP1LC3B-202ENST00000561823 ALDH8A1Q9H2A2 487 aaPredicted RBP20.1■□□□□ 0.81
MAP1LC3B-202ENST00000561823 DDAH1O94760 285 aa20.09■□□□□ 0.81
MAP1LC3B-202ENST00000561823 CYP2C18P33260 490 aa20.09■□□□□ 0.81
MAP1LC3B-202ENST00000561823 COL9A3Q14050 684 aaPredicted RBP20.09■□□□□ 0.81
MAP1LC3B-202ENST00000561823 LY6KQ17RY6 165 aa20.09■□□□□ 0.81
MAP1LC3B-202ENST00000561823 C16orf59Q7L2K0 433 aa20.09■□□□□ 0.81
MAP1LC3B-202ENST00000561823 HIPK3Q9H422 1215 aa20.09■□□□□ 0.81
MAP1LC3B-202ENST00000561823 SH2B2O14492 632 aaPredicted RBP20.08■□□□□ 0.81
MAP1LC3B-202ENST00000561823 HOXA13P31271 388 aaPredicted RBP20.08■□□□□ 0.81
MAP1LC3B-202ENST00000561823 KIF5BP33176 963 aa20.08■□□□□ 0.81
MAP1LC3B-202ENST00000561823 ARHGAP1Q07960 439 aa20.08■□□□□ 0.81
MAP1LC3B-202ENST00000561823 CTCFLQ8NI51 663 aaPredicted RBP20.08■□□□□ 0.81
MAP1LC3B-202ENST00000561823 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.08■□□□□ 0.81
MAP1LC3B-202ENST00000561823 PDCD2LQ9BRP1 358 aa20.08■□□□□ 0.81
MAP1LC3B-202ENST00000561823 MYL10Q9BUA6 226 aa20.08■□□□□ 0.81
MAP1LC3B-202ENST00000561823 NOC4LQ9BVI4 516 aaKnown RBP20.08■□□□□ 0.81
MAP1LC3B-202ENST00000561823 SPZ1Q9BXG8 430 aa20.08■□□□□ 0.81
MAP1LC3B-202ENST00000561823 DDX41Q9UJV9 622 aaKnown RBP20.08■□□□□ 0.81
MAP1LC3B-202ENST00000561823 GCOM1H8Y6P7 765 aaPredicted RBP20.07■□□□□ 0.8
MAP1LC3B-202ENST00000561823 GH1P01241 217 aa20.07■□□□□ 0.8
MAP1LC3B-202ENST00000561823 POLR2MP0CAP2 368 aa20.07■□□□□ 0.8
MAP1LC3B-202ENST00000561823 SMARCA1P28370 1054 aa20.07■□□□□ 0.8
MAP1LC3B-202ENST00000561823 LIFRP42702 1097 aa20.07■□□□□ 0.8
MAP1LC3B-202ENST00000561823 NBPF20Q3BBV1 942 aa20.07■□□□□ 0.8
MAP1LC3B-202ENST00000561823 TMEM240Q5SV17 173 aa20.07■□□□□ 0.8
MAP1LC3B-202ENST00000561823 NFXL1Q6ZNB6 911 aa20.07■□□□□ 0.8
MAP1LC3B-202ENST00000561823 AFG1LQ8WV93 481 aa20.07■□□□□ 0.8
MAP1LC3B-202ENST00000561823 LZTS2Q9BRK4 669 aa20.07■□□□□ 0.8
MAP1LC3B-202ENST00000561823 STXBP5LQ9Y2K9 1186 aa20.07■□□□□ 0.8
MAP1LC3B-202ENST00000561823 UMODL1Q5DID0 1318 aa20.06■□□□□ 0.8
MAP1LC3B-202ENST00000561823 CCDC69A6NI79 296 aa20.06■□□□□ 0.8
MAP1LC3B-202ENST00000561823 SUPT20HL2P0C7V6 817 aa20.06■□□□□ 0.8
MAP1LC3B-202ENST00000561823 ZNF697Q5TEC3 545 aa20.06■□□□□ 0.8
MAP1LC3B-202ENST00000561823 NFRKBQ6P4R8 1299 aa20.06■□□□□ 0.8
MAP1LC3B-202ENST00000561823 VSIG10LQ86VR7 867 aa20.06■□□□□ 0.8
MAP1LC3B-202ENST00000561823 PIBF1Q8WXW3 757 aa20.06■□□□□ 0.8
MAP1LC3B-202ENST00000561823 EMID1Q96A84 441 aaPredicted RBP20.06■□□□□ 0.8
MAP1LC3B-202ENST00000561823 IL23AQ9NPF7 189 aa20.06■□□□□ 0.8
MAP1LC3B-202ENST00000561823 TRMT13Q9NUP7 481 aaKnown RBP20.06■□□□□ 0.8
MAP1LC3B-202ENST00000561823 MMP3P08254 477 aa20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 ACRP10323 421 aa20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 MYCLP12524 364 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 GNAQP50148 359 aa20.05■□□□□ 0.8
MAP1LC3B-202ENST00000561823 PGM5Q15124 567 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms