RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 ITGB3BPQ13352 177 aaPredicted RBP8.04□□□□□ -1.12
CDH1-203ENST00000561751 PDCLQ13371 301 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 TAF7Q15545 349 aaPredicted RBP8.04□□□□□ -1.12
CDH1-203ENST00000561751 KRT24Q2M2I5 525 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 TTMPQ5BVD1 217 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 RRP12Q5JTH9 1297 aaKnown RBP8.04□□□□□ -1.12
CDH1-203ENST00000561751 ZMYM1Q5SVZ6 1142 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 CFAP58Q5T655 872 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 MYSM1Q5VVJ2 828 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 SPATA1Q5VX52 437 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 DESI1Q6ICB0 168 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 LCA5Q86VQ0 697 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 IFT20Q8IY31 132 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 CLASRPQ8N2M8 674 aaKnown RBP8.04□□□□□ -1.12
CDH1-203ENST00000561751 ANKS4BQ8N8V4 417 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 TBC1D5Q92609 795 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 RNPC3Q96LT9 517 aaKnown RBP8.04□□□□□ -1.12
CDH1-203ENST00000561751 VCXQ9H320 206 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 ZWILCHQ9H900 591 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 DMAP1Q9NPF5 467 aaPredicted RBP8.04□□□□□ -1.12
CDH1-203ENST00000561751 LZTFL1Q9NQ48 299 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 ZNHIT6Q9NWK9 470 aaKnown RBP8.04□□□□□ -1.12
CDH1-203ENST00000561751 SLC12A4Q9UP95 1085 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 PHF24Q9UPV7 400 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 WDR37Q9Y2I8 494 aa8.04□□□□□ -1.12
CDH1-203ENST00000561751 NCAPD2Q15021 1401 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 MARF1Q9Y4F3 1742 aaKnown RBP8.03□□□□□ -1.12
CDH1-203ENST00000561751 A0A1B0GVL5 298 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 TMEM232C9JQI7 657 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 CFAP99D6REC4 459 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 SMIM24O75264 130 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 TRIM37O94972 964 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 UBTFL1P0CB47 393 aaPredicted RBP8.03□□□□□ -1.12
CDH1-203ENST00000561751 CCDC166P0CW27 439 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 CPA1P15085 419 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 PFKFB1P16118 471 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 TCP1P17987 556 aaKnown RBP8.03□□□□□ -1.12
CDH1-203ENST00000561751 SKIV2L2P42285 1042 aaKnown RBP8.03□□□□□ -1.12
CDH1-203ENST00000561751 ADKP55263 362 aaKnown RBP8.03□□□□□ -1.12
CDH1-203ENST00000561751 CDK17Q00537 523 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 ATP2B2Q01814 1243 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 KIF5AQ12840 1032 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 MYO1EQ12965 1108 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 PAK2Q13177 524 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 THEMIS2Q5TEJ8 643 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 RESP18Q5W5W9 173 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 ANO1Q5XXA6 986 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 SND1Q7KZF4 910 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDH1-203ENST00000561751 DHX32Q7L7V1 743 aaKnown RBP8.03□□□□□ -1.12
CDH1-203ENST00000561751 KRT28Q7Z3Y7 464 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 CROCCP2Q86T23 111 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 CCDC63Q8NA47 563 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 SPATA20Q8TB22 786 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 SNRNP27Q8WVK2 155 aaKnown RBP8.03□□□□□ -1.12
CDH1-203ENST00000561751 JAKMIP2Q96AA8 810 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 HVCN1Q96D96 273 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
CDH1-203ENST00000561751 SEC16BQ96JE7 1060 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 MMS19Q96T76 1030 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 VCX3BQ9H321 246 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 VCX3AQ9NNX9 186 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 TRPV5Q9NQA5 729 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDH1-203ENST00000561751 HAUS2Q9NVX0 235 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 ATXN10Q9UBB4 475 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 ADD3Q9UEY8 706 aaKnown RBP8.03□□□□□ -1.12
CDH1-203ENST00000561751 SUN2Q9UH99 717 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 DDX25Q9UHL0 483 aaKnown RBP8.03□□□□□ -1.12
CDH1-203ENST00000561751 EMILIN1Q9Y6C2 1016 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 EPN1Q9Y6I3 576 aaPredicted RBP8.03□□□□□ -1.12
CDH1-203ENST00000561751 KIF20BQ96Q89 1820 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 ARHGEF28Q8N1W1 1705 aaKnown RBP8.03□□□□□ -1.12
CDH1-203ENST00000561751 CRB1P82279 1406 aa8.03□□□□□ -1.12
CDH1-203ENST00000561751 CACNA1FO60840 1977 aa8.02□□□□□ -1.12
CDH1-203ENST00000561751 PXDNQ92626 1479 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 SPDYE5A6NIY4 337 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 SOWAHDA6NJG2 315 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 ORC4O43929 436 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 PPP1R12BO60237 982 aaPredicted RBP8.02□□□□□ -1.13
CDH1-203ENST00000561751 SURF6O75683 361 aaKnown RBP8.02□□□□□ -1.13
CDH1-203ENST00000561751 RPSAP08865 295 aaKnown RBP8.02□□□□□ -1.13
CDH1-203ENST00000561751 GNAT1P11488 350 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 TPP2P29144 1249 aaPredicted RBP8.02□□□□□ -1.13
CDH1-203ENST00000561751 GJA5P36382 358 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 PLCD1P51178 756 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 PSMD7P51665 324 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 EXOSC10Q01780 885 aaKnown RBP8.02□□□□□ -1.13
CDH1-203ENST00000561751 SNX1Q13596 522 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 MORC3Q14149 939 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 E2F5Q15329 346 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 IMMTQ16891 758 aaKnown RBP8.02□□□□□ -1.13
CDH1-203ENST00000561751 SLC4A8Q2Y0W8 1093 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 PABPC1LQ4VXU2 614 aaKnown RBP8.02□□□□□ -1.13
CDH1-203ENST00000561751 HDGFL1Q5TGJ6 251 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 CDKAL1Q5VV42 579 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 RINLQ6ZS11 566 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 APTXQ7Z2E3 356 aaKnown RBP8.02□□□□□ -1.13
CDH1-203ENST00000561751 TRIM46Q7Z4K8 759 aa8.02□□□□□ -1.13
CDH1-203ENST00000561751 DZIP3Q86Y13 1208 aaKnown RBP8.02□□□□□ -1.13
CDH1-203ENST00000561751 LRRC43Q8N309 656 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms