RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 SLC43A3Q8NBI5 491 aa23.96■■□□□ 1.43
TPM1-232ENST00000561425 SCFD2Q8WU76 684 aa23.96■■□□□ 1.43
TPM1-232ENST00000561425 RMDN3Q96TC7 470 aa23.96■■□□□ 1.43
TPM1-232ENST00000561425 TRIM43BA6NCK2 446 aa23.95■■□□□ 1.42
TPM1-232ENST00000561425 NKRFO15226 690 aaKnown RBP eCLIP23.95■■□□□ 1.421e-6■■□□□ 14
TPM1-232ENST00000561425 EPB41L2O43491 1005 aaKnown RBP23.95■■□□□ 1.42
TPM1-232ENST00000561425 CABYRO75952 493 aa23.95■■□□□ 1.42
TPM1-232ENST00000561425 CCDC62Q6P9F0 684 aa23.95■■□□□ 1.42
TPM1-232ENST00000561425 SH3RF1Q7Z6J0 888 aa23.95■■□□□ 1.42
TPM1-232ENST00000561425 SRBD1Q8N5C6 995 aaKnown RBP23.95■■□□□ 1.42
TPM1-232ENST00000561425 TRIM43Q96BQ3 446 aaPredicted RBP23.95■■□□□ 1.42
TPM1-232ENST00000561425 LRRC2Q9BYS8 371 aa23.95■■□□□ 1.42
TPM1-232ENST00000561425 PXMP2Q9NR77 195 aa23.95■■□□□ 1.42
TPM1-232ENST00000561425 PCDH10Q9P2E7 1040 aa23.95■■□□□ 1.42
TPM1-232ENST00000561425 SLC12A7Q9Y666 1083 aa23.95■■□□□ 1.42
TPM1-232ENST00000561425 DNAH12Q6ZR08 3092 aa23.95■■□□□ 1.42
TPM1-232ENST00000561425 KIAA0355O15063 1070 aa23.94■■□□□ 1.42
TPM1-232ENST00000561425 CFBP00751 764 aa23.94■■□□□ 1.42
TPM1-232ENST00000561425 FAAP100Q0VG06 881 aa23.94■■□□□ 1.42
TPM1-232ENST00000561425 NFXL1Q6ZNB6 911 aa23.94■■□□□ 1.42
TPM1-232ENST00000561425 FANCBQ8NB91 859 aa23.94■■□□□ 1.42
TPM1-232ENST00000561425 ARVCFO00192 962 aa23.93■■□□□ 1.42
TPM1-232ENST00000561425 PLEKHA8P1O95397 391 aa23.93■■□□□ 1.42
TPM1-232ENST00000561425 HMGB1P09429 215 aaKnown RBP23.93■■□□□ 1.42
TPM1-232ENST00000561425 CLTBP09497 229 aa23.93■■□□□ 1.42
TPM1-232ENST00000561425 MDM2Q00987 491 aaPredicted RBP23.93■■□□□ 1.42
TPM1-232ENST00000561425 STXBP2Q15833 593 aa23.93■■□□□ 1.42
TPM1-232ENST00000561425 SEZ6LQ9BYH1 1024 aa23.93■■□□□ 1.42
TPM1-232ENST00000561425 PRKAG2Q9UGJ0 569 aa23.93■■□□□ 1.42
TPM1-232ENST00000561425 TRIOBPQ9H2D6 2365 aa23.93■■□□□ 1.42
TPM1-232ENST00000561425 GRIN2DO15399 1336 aa23.92■■□□□ 1.42
TPM1-232ENST00000561425 A0A0U1RQG5 324 aaPredicted RBP23.92■■□□□ 1.42
TPM1-232ENST00000561425 ZEB2O60315 1214 aa23.92■■□□□ 1.42
TPM1-232ENST00000561425 EIF3JO75822 258 aaKnown RBP23.92■■□□□ 1.42
TPM1-232ENST00000561425 ARIH2O95376 493 aa23.92■■□□□ 1.42
TPM1-232ENST00000561425 NR3C2P08235 984 aa23.92■■□□□ 1.42
TPM1-232ENST00000561425 ITGB8P26012 769 aa23.92■■□□□ 1.42
TPM1-232ENST00000561425 CXCL17Q6UXB2 119 aa23.92■■□□□ 1.42
TPM1-232ENST00000561425 RRP36Q96EU6 259 aaKnown RBP23.92■■□□□ 1.42
TPM1-232ENST00000561425 PDCD2LQ9BRP1 358 aa23.92■■□□□ 1.42
TPM1-232ENST00000561425 UBE2OQ9C0C9 1292 aaKnown RBP23.92■■□□□ 1.42
TPM1-232ENST00000561425 MROH7Q68CQ1 1323 aa23.91■■□□□ 1.42
TPM1-232ENST00000561425 A6NJR5 290 aa23.91■■□□□ 1.42
TPM1-232ENST00000561425 GCOM1H8Y6P7 765 aaPredicted RBP23.91■■□□□ 1.42
TPM1-232ENST00000561425 POLR2MP0CAP2 368 aa23.91■■□□□ 1.42
TPM1-232ENST00000561425 TTLL4Q14679 1199 aa23.91■■□□□ 1.42
TPM1-232ENST00000561425 PPP2R5BQ15173 497 aa23.91■■□□□ 1.42
TPM1-232ENST00000561425 ARHGEF16Q5VV41 709 aa23.91■■□□□ 1.42
TPM1-232ENST00000561425 APOA5Q6Q788 366 aa23.91■■□□□ 1.42
TPM1-232ENST00000561425 TMTC3Q6ZXV5 915 aa23.91■■□□□ 1.42
TPM1-232ENST00000561425 TDHQ8IZJ6 230 aa23.91■■□□□ 1.42
TPM1-232ENST00000561425 FBXL16Q8N461 479 aa23.91■■□□□ 1.42
TPM1-232ENST00000561425 LBHD1Q9BQE6 289 aaPredicted RBP23.91■■□□□ 1.42
TPM1-232ENST00000561425 BRPF3Q9ULD4 1205 aa23.91■■□□□ 1.42
TPM1-232ENST00000561425 SNX14Q9Y5W7 946 aa23.91■■□□□ 1.42
TPM1-232ENST00000561425 DCDC2CA8MYV0 355 aa23.9■■□□□ 1.42
TPM1-232ENST00000561425 PQBP1O60828 265 aaKnown RBP23.9■■□□□ 1.42
TPM1-232ENST00000561425 REC8O95072 547 aa23.9■■□□□ 1.42
TPM1-232ENST00000561425 CD4P01730 458 aa23.9■■□□□ 1.42
TPM1-232ENST00000561425 TXNP10599 105 aaKnown RBP23.9■■□□□ 1.42
TPM1-232ENST00000561425 RXRAP19793 462 aa23.9■■□□□ 1.42
TPM1-232ENST00000561425 HOXA13P31271 388 aaPredicted RBP23.9■■□□□ 1.42
TPM1-232ENST00000561425 LRIT3Q3SXY7 679 aa23.9■■□□□ 1.42
TPM1-232ENST00000561425 VSIG10LQ86VR7 867 aa23.9■■□□□ 1.42
TPM1-232ENST00000561425 FAM126BQ8IXS8 530 aa23.9■■□□□ 1.42
TPM1-232ENST00000561425 TBX21Q9UL17 535 aa23.9■■□□□ 1.42
TPM1-232ENST00000561425 MYH6P13533 1939 aa23.9■■□□□ 1.42
TPM1-232ENST00000561425 BAZ2BQ9UIF8 2168 aaKnown RBP23.89■■□□□ 1.42
TPM1-232ENST00000561425 PIK3CDO00329 1044 aa23.89■■□□□ 1.41
TPM1-232ENST00000561425 EIF2AK2P19525 551 aaKnown RBP23.89■■□□□ 1.41
TPM1-232ENST00000561425 CPT1AP50416 773 aa23.89■■□□□ 1.41
TPM1-232ENST00000561425 RCAN1P53805 252 aa23.89■■□□□ 1.41
TPM1-232ENST00000561425 CMTR1Q8N1G2 835 aaKnown RBP23.89■■□□□ 1.41
TPM1-232ENST00000561425 OR6J1Q8NGC5 347 aa23.89■■□□□ 1.41
TPM1-232ENST00000561425 COPS5Q92905 334 aa23.89■■□□□ 1.41
TPM1-232ENST00000561425 TCEANC2Q96MN5 208 aa23.89■■□□□ 1.41
TPM1-232ENST00000561425 FRMPD4Q14CM0 1322 aa23.88■■□□□ 1.41
TPM1-232ENST00000561425 RGS20O76081 388 aa23.88■■□□□ 1.41
TPM1-232ENST00000561425 PURAQ00577 322 aaKnown RBP23.88■■□□□ 1.41
TPM1-232ENST00000561425 FUT2Q10981 343 aa23.88■■□□□ 1.41
TPM1-232ENST00000561425 ITGA7Q13683 1181 aa23.88■■□□□ 1.41
TPM1-232ENST00000561425 PGM5Q15124 567 aa23.88■■□□□ 1.41
TPM1-232ENST00000561425 BADQ92934 168 aa23.88■■□□□ 1.41
TPM1-232ENST00000561425 VTI1AQ96AJ9 217 aa23.88■■□□□ 1.41
TPM1-232ENST00000561425 PRDM5Q9NQX1 630 aaPredicted RBP23.88■■□□□ 1.41
TPM1-232ENST00000561425 TMEM39AQ9NV64 488 aa23.88■■□□□ 1.41
TPM1-232ENST00000561425 POLR3EQ9NVU0 708 aa23.88■■□□□ 1.41
TPM1-232ENST00000561425 DDX41Q9UJV9 622 aaKnown RBP23.88■■□□□ 1.41
TPM1-232ENST00000561425 LTBP2Q14767 1821 aa23.88■■□□□ 1.41
TPM1-232ENST00000561425 KPNA6O60684 536 aa23.87■■□□□ 1.41
TPM1-232ENST00000561425 SYNE3Q6ZMZ3 975 aa23.87■■□□□ 1.41
TPM1-232ENST00000561425 SEPT14Q6ZU15 432 aa23.87■■□□□ 1.41
TPM1-232ENST00000561425 PIBF1Q8WXW3 757 aa23.87■■□□□ 1.41
TPM1-232ENST00000561425 EMID1Q96A84 441 aaPredicted RBP23.87■■□□□ 1.41
TPM1-232ENST00000561425 AGXT2Q9BYV1 514 aa23.87■■□□□ 1.41
TPM1-232ENST00000561425 FAM217BQ9NTX9 383 aaPredicted RBP23.87■■□□□ 1.41
TPM1-232ENST00000561425 RBM28Q9NW13 759 aaKnown RBP23.87■■□□□ 1.41
TPM1-232ENST00000561425 SOX1O00570 391 aaPredicted RBP23.86■■□□□ 1.41
TPM1-232ENST00000561425 MEIS2O14770 477 aa23.86■■□□□ 1.41
TPM1-232ENST00000561425 ARHGAP1Q07960 439 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms