RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 MYO9BQ13459 2157 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 PNMA6FA0A0J9YX94 578 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 A0A1W2PQ27 194 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 A0A1W2PQ64 194 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 A0A1W2PQD8 194 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 A0A1W2PRG0 241 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 ESYT2A0FGR8 921 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 FAM205CA6NFA0 338 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 PHF20L1A8MW92 1017 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 F5H6K3 240 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 M0R2N6 131 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 HAX1O00165 279 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 PPP6R2O75170 966 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 DEKP35659 375 aaKnown RBP8.59□□□□□ -1.03
TPM1-231ENST00000561395 NAPAP54920 295 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 MDM2Q00987 491 aaPredicted RBP8.59□□□□□ -1.03
TPM1-231ENST00000561395 KLRC3Q07444 240 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 EARS2Q5JPH6 523 aaKnown RBP8.59□□□□□ -1.03
TPM1-231ENST00000561395 TTBK2Q6IQ55 1244 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 PPP1R18Q6NYC8 613 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 MIGA2Q7L4E1 593 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 HOMER1Q86YM7 354 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 ADGRF4Q8IZF3 695 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 ACER1Q8TDN7 264 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 KIF12Q96FN5 646 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 CDX2Q99626 313 aaPredicted RBP8.59□□□□□ -1.03
TPM1-231ENST00000561395 ZNF341Q9BYN7 854 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 ZMYND12Q9H0C1 365 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 GOLPH3LQ9H4A5 285 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 JMJD4Q9H9V9 463 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 GINM1Q9NU53 330 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 DDX19AQ9NUU7 478 aaKnown RBP8.59□□□□□ -1.03
TPM1-231ENST00000561395 NOL7Q9UMY1 257 aaKnown RBP8.59□□□□□ -1.03
TPM1-231ENST00000561395 TMX2Q9Y320 296 aa8.59□□□□□ -1.03
TPM1-231ENST00000561395 MORC2Q9Y6X9 1032 aaPredicted RBP8.59□□□□□ -1.03
TPM1-231ENST00000561395 PFASO15067 1338 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 SYCE3A1L190 88 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 GOLGA6L3A6NEY3 463 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 TRIM75PA6NK02 468 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 TULP1O00294 542 aaPredicted RBP8.58□□□□□ -1.04
TPM1-231ENST00000561395 ADAMTS3O15072 1205 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 NR1I2O75469 434 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 LETM1O95202 739 aaPredicted RBP8.58□□□□□ -1.04
TPM1-231ENST00000561395 ASNSP08243 561 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 BMP3P12645 472 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 SLC16A2P36021 539 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 TRAPPC10P48553 1259 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 AXDND1Q5T1B0 1012 aaPredicted RBP8.58□□□□□ -1.04
TPM1-231ENST00000561395 ADALQ6DHV7 355 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 GPAT2Q6NUI2 795 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 LRSAM1Q6UWE0 723 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 CCDC73Q6ZRK6 1079 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 ZNF467Q7Z7K2 595 aaPredicted RBP8.58□□□□□ -1.04
TPM1-231ENST00000561395 CCAR1Q8IX12 1150 aaKnown RBP8.58□□□□□ -1.04
TPM1-231ENST00000561395 FSIP1Q8NA03 581 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 MRPS27Q92552 414 aaKnown RBP8.58□□□□□ -1.04
TPM1-231ENST00000561395 FAM122AQ96E09 287 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 CLSTN2Q9H4D0 955 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 SH2D4AQ9H788 454 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 VAT1LQ9HCJ6 419 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 GOPCQ9HD26 462 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.58□□□□□ -1.04
TPM1-231ENST00000561395 DACT1Q9NYF0 836 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 CEP131Q9UPN4 1083 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 PCDHB6Q9Y5E3 794 aa8.58□□□□□ -1.04
TPM1-231ENST00000561395 TCF20Q9UGU0 1960 aaKnown RBP8.58□□□□□ -1.04
TPM1-231ENST00000561395 USP17L10C9JJH3 530 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 TNFRSF10AO00220 468 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 ZBTB5O15062 677 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 RAD21O60216 631 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 CTNND1O60716 968 aaKnown RBP8.57□□□□□ -1.04
TPM1-231ENST00000561395 CUTAO60888 179 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 PPP1R11O60927 126 aaPredicted RBP8.57□□□□□ -1.04
TPM1-231ENST00000561395 BMP15O95972 392 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 HMGCRP04035 888 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 MARCKSP29966 332 aaPredicted RBP8.57□□□□□ -1.04
TPM1-231ENST00000561395 GNA11P29992 359 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 FAM160A1Q05DH4 1040 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 KIAA1755Q5JYT7 1200 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 TTC38Q5R3I4 469 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 SYDE2Q5VT97 1194 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 BTNL9Q6UXG8 535 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 PIK3AP1Q6ZUJ8 805 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 GAS2L3Q86XJ1 694 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 ENGASEQ8NFI3 743 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 RASGRP4Q8TDF6 673 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 MYLIPQ8WY64 445 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 COA7Q96BR5 231 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 NUP88Q99567 741 aaPredicted RBP8.57□□□□□ -1.04
TPM1-231ENST00000561395 NUP62CLQ9H1M0 184 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 VCPKMTQ9H867 229 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 C6orf50Q9HD87 102 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.57□□□□□ -1.04
TPM1-231ENST00000561395 ZNF112Q9UJU3 913 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 PCDHA6Q9UN73 950 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 PCDHA8Q9Y5H6 950 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 STK24Q9Y6E0 443 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 PARP14Q460N5 1801 aa8.57□□□□□ -1.04
TPM1-231ENST00000561395 TMEM265A0A087WTH1 108 aa8.56□□□□□ -1.04
TPM1-231ENST00000561395 FAM237AA0A1B0GTK4 181 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms