RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PDE4DIPQ5VU43 2346 aa11.68□□□□□ -0.54
HERC1-212ENST00000561348 SYNRGQ9UMZ2 1314 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 MYADML2A6NDP7 307 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 DNM1LO00429 736 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 ADCY6O43306 1168 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 EIF5BO60841 1220 aaKnown RBP11.67□□□□□ -0.54
HERC1-212ENST00000561348 IGHA2P01877 340 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 SYN1P17600 705 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 NAPAP54920 295 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 USP17L6PQ6QN14 398 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 RGS22Q8NE09 1264 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 DNERQ8NFT8 737 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 WDR11Q9BZH6 1224 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 VTA1Q9NP79 307 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 ZMYND8Q9ULU4 1186 aaPredicted RBP11.67□□□□□ -0.54
HERC1-212ENST00000561348 ATP11BQ9Y2G3 1177 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 NR2E3Q9Y5X4 410 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 FRMPD3Q5JV73 1810 aa11.67□□□□□ -0.54
HERC1-212ENST00000561348 CCDC196A0A1B0GTZ2 297 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 H0YGN5 161 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 CPLX1O14810 134 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 OPLAHO14841 1288 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 EPB41L2O43491 1005 aaKnown RBP11.66□□□□□ -0.54
HERC1-212ENST00000561348 DTNBO60941 627 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 DUSP11O75319 330 aaKnown RBP11.66□□□□□ -0.54
HERC1-212ENST00000561348 NR3C2P08235 984 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 TXNP10599 105 aaKnown RBP11.66□□□□□ -0.54
HERC1-212ENST00000561348 SMPD1P17405 629 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 CAPN2P17655 700 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 MNX1P50219 401 aaPredicted RBP11.66□□□□□ -0.54
HERC1-212ENST00000561348 PPP2R5BQ15173 497 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 STXBP2Q15833 593 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 KCNA10Q16322 511 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 UBE2SQ16763 222 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 IQSEC1Q6DN90 963 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 TLK2Q86UE8 772 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 OR6J1Q8NGC5 347 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 PHKBQ93100 1093 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 SLC26A6Q9BXS9 759 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 PSTPIP2Q9H939 334 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 PRDM5Q9NQX1 630 aaPredicted RBP11.66□□□□□ -0.54
HERC1-212ENST00000561348 PXMP2Q9NR77 195 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 RTEL1Q9NZ71 1219 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 LCTP09848 1927 aa11.66□□□□□ -0.54
HERC1-212ENST00000561348 CNTNAP5Q8WYK1 1306 aa11.65□□□□□ -0.54
HERC1-212ENST00000561348 MYL3P08590 195 aa11.65□□□□□ -0.54
HERC1-212ENST00000561348 SMARCA1P28370 1054 aa11.65□□□□□ -0.54
HERC1-212ENST00000561348 PDIA3P30101 505 aaKnown RBP11.65□□□□□ -0.54
HERC1-212ENST00000561348 HSD17B4P51659 736 aa11.65□□□□□ -0.54
HERC1-212ENST00000561348 NEK4P51957 841 aa11.65□□□□□ -0.54
HERC1-212ENST00000561348 TOB2Q14106 344 aaPredicted RBP11.65□□□□□ -0.54
HERC1-212ENST00000561348 LRRC26Q2I0M4 334 aa11.65□□□□□ -0.54
HERC1-212ENST00000561348 TAPT1Q6NXT6 567 aa11.65□□□□□ -0.54
HERC1-212ENST00000561348 UBE2Q1Q7Z7E8 422 aa11.65□□□□□ -0.54
HERC1-212ENST00000561348 COPS5Q92905 334 aa11.65□□□□□ -0.54
HERC1-212ENST00000561348 TM6SF1Q9BZW5 370 aa11.65□□□□□ -0.54
HERC1-212ENST00000561348 KATNBL1Q9H079 304 aa11.65□□□□□ -0.54
HERC1-212ENST00000561348 MRVI1Q9Y6F6 885 aa11.65□□□□□ -0.54
HERC1-212ENST00000561348 TNRC18O15417 2968 aaPredicted RBP11.64□□□□□ -0.55
HERC1-212ENST00000561348 SPDYE3A6NKU9 549 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 ADAMTS4O75173 837 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 ASGR1P07306 291 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 CCND2P30279 289 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 ACLYP53396 1101 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 RTP1P59025 263 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 TTLL4Q14679 1199 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 FSCN1Q16658 493 aaKnown RBP11.64□□□□□ -0.55
HERC1-212ENST00000561348 LY6KQ17RY6 165 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 WWC2Q6AWC2 1192 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 PCSK9Q8NBP7 692 aaKnown RBP11.64□□□□□ -0.55
HERC1-212ENST00000561348 IL31RAQ8NI17 732 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 SCFD2Q8WU76 684 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 PGBD1Q96JS3 809 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 GLT1D1Q96MS3 346 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 IWS1Q96ST2 819 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 SLKQ9H2G2 1235 aaPredicted RBP11.64□□□□□ -0.55
HERC1-212ENST00000561348 STARD7Q9NQZ5 370 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 FAM217BQ9NTX9 383 aaPredicted RBP11.64□□□□□ -0.55
HERC1-212ENST00000561348 PRKAG2Q9UGJ0 569 aa11.64□□□□□ -0.55
HERC1-212ENST00000561348 A0A1W2PQ45 241 aaPredicted RBP11.63□□□□□ -0.55
HERC1-212ENST00000561348 A0A1W2PQY0 241 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 SMCO2A6NFE2 343 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 ZEB2O60315 1214 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 PQBP1O60828 265 aaKnown RBP11.63□□□□□ -0.55
HERC1-212ENST00000561348 COL6A1P12109 1028 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 SSRP1Q08945 709 aaKnown RBP11.63□□□□□ -0.55
HERC1-212ENST00000561348 PGM5Q15124 567 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 TRIM60Q495X7 471 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 C8orf34Q49A92 452 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 DUSP28Q4G0W2 176 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 PRPF38BQ5VTL8 546 aaKnown RBP11.63□□□□□ -0.55
HERC1-212ENST00000561348 CPLX2Q6PUV4 134 aaKnown RBP11.63□□□□□ -0.55
HERC1-212ENST00000561348 CXCL17Q6UXB2 119 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 SLC39A5Q6ZMH5 540 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 PPP1R13LQ8WUF5 828 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 PDCD2LQ9BRP1 358 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 UPF2Q9HAU5 1272 aaKnown RBP11.63□□□□□ -0.55
HERC1-212ENST00000561348 PKD2L1Q9P0L9 805 aa11.63□□□□□ -0.55
HERC1-212ENST00000561348 SPDYE4A6NLX3 237 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 EIF3JO75822 258 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms